RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 ZNF467Q7Z7K2 595 aaPredicted RBP11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 BRSK2Q8IWQ3 736 aa11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 DDX1Q92499 740 aaKnown RBP11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 RPS6KC1Q96S38 1066 aa11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 PCDHB18PQ96TA0 734 aa11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 HAPLN2Q9GZV7 340 aa11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 GDF3Q9NR23 364 aa11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 CTTNBP2NLQ9P2B4 639 aa11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 UVRAGQ9P2Y5 699 aa11.61□□□□□ -0.55
PHACTR4-204ENST00000493669 ZNFX1Q9P2E3 1918 aaKnown RBP11.6□□□□□ -0.55
PHACTR4-204ENST00000493669 CNTNAP2Q9UHC6 1331 aa11.6□□□□□ -0.55
PHACTR4-204ENST00000493669 CLDN3O15551 220 aa11.6□□□□□ -0.55
PHACTR4-204ENST00000493669 ASAP2O43150 1006 aa11.6□□□□□ -0.55
PHACTR4-204ENST00000493669 STRNO43815 780 aa11.6□□□□□ -0.55
PHACTR4-204ENST00000493669 MSCO60682 206 aa11.6□□□□□ -0.55
PHACTR4-204ENST00000493669 CYP1A2P05177 515 aa11.6□□□□□ -0.55
PHACTR4-204ENST00000493669 OAS2P29728 719 aaKnown RBP11.6□□□□□ -0.55
PHACTR4-204ENST00000493669 ACOT2P49753 483 aa11.6□□□□□ -0.55
PHACTR4-204ENST00000493669 LAMTOR4Q0VGL1 99 aa11.6□□□□□ -0.55
PHACTR4-204ENST00000493669 WDR78Q5VTH9 848 aa11.6□□□□□ -0.55
PHACTR4-204ENST00000493669 TDRD10Q5VZ19 366 aaKnown RBP11.6□□□□□ -0.55
PHACTR4-204ENST00000493669 PPP1R2P3Q6NXS1 205 aa11.6□□□□□ -0.55
PHACTR4-204ENST00000493669 TATDN2Q93075 761 aa11.6□□□□□ -0.55
PHACTR4-204ENST00000493669 PDE11AQ9HCR9 933 aa11.6□□□□□ -0.55
PHACTR4-204ENST00000493669 ANKFY1Q9P2R3 1169 aa11.6□□□□□ -0.55
PHACTR4-204ENST00000493669 PCDHB2Q9Y5E7 798 aa11.6□□□□□ -0.55
PHACTR4-204ENST00000493669 DDX3YO15523 660 aaKnown RBP11.6□□□□□ -0.55
PHACTR4-204ENST00000493669 LAMC2Q13753 1193 aa11.6□□□□□ -0.55
PHACTR4-204ENST00000493669 MAPK6Q16659 721 aa11.6□□□□□ -0.55
PHACTR4-204ENST00000493669 ZNF792Q3KQV3 632 aa11.6□□□□□ -0.55
PHACTR4-204ENST00000493669 ARMCX2Q7L311 632 aa11.6□□□□□ -0.55
PHACTR4-204ENST00000493669 ANKRD23Q86SG2 305 aa11.6□□□□□ -0.55
PHACTR4-204ENST00000493669 HDAC7Q8WUI4 952 aa11.6□□□□□ -0.55
PHACTR4-204ENST00000493669 CAVIN3Q969G5 261 aa11.6□□□□□ -0.55
PHACTR4-204ENST00000493669 TRIM11Q96F44 468 aa11.6□□□□□ -0.55
PHACTR4-204ENST00000493669 GOLPH3Q9H4A6 298 aa11.6□□□□□ -0.55
PHACTR4-204ENST00000493669 SUGCTQ9HAC7 445 aa11.6□□□□□ -0.55
PHACTR4-204ENST00000493669 MORF4L1Q9UBU8 362 aa11.6□□□□□ -0.55
PHACTR4-204ENST00000493669 COG5Q9UP83 839 aa11.6□□□□□ -0.55
PHACTR4-204ENST00000493669 NOC2LQ9Y3T9 749 aaKnown RBP11.6□□□□□ -0.55
PHACTR4-204ENST00000493669 RBM47A0AV96 593 aaKnown RBP11.59□□□□□ -0.55
PHACTR4-204ENST00000493669 PRKCBP05771 671 aa11.59□□□□□ -0.55
PHACTR4-204ENST00000493669 MMEP08473 750 aa11.59□□□□□ -0.55
PHACTR4-204ENST00000493669 TNNT3P45378 269 aaPredicted RBP11.59□□□□□ -0.55
PHACTR4-204ENST00000493669 PAK2Q13177 524 aa11.59□□□□□ -0.55
PHACTR4-204ENST00000493669 BIRC3Q13489 604 aa11.59□□□□□ -0.55
PHACTR4-204ENST00000493669 ACAD10Q6JQN1 1059 aa11.59□□□□□ -0.55
PHACTR4-204ENST00000493669 WDR49Q8IV35 697 aa11.59□□□□□ -0.55
PHACTR4-204ENST00000493669 EMID1Q96A84 441 aaPredicted RBP11.59□□□□□ -0.55
PHACTR4-204ENST00000493669 ZBTB45Q96K62 511 aaPredicted RBP11.59□□□□□ -0.55
PHACTR4-204ENST00000493669 ACO2Q99798 780 aaKnown RBP11.59□□□□□ -0.55
PHACTR4-204ENST00000493669 NFKBIZQ9BYH8 718 aa11.59□□□□□ -0.55
PHACTR4-204ENST00000493669 SLITRK6Q9H5Y7 841 aa11.59□□□□□ -0.55
PHACTR4-204ENST00000493669 MYBL1P10243 752 aa11.59□□□□□ -0.55
PHACTR4-204ENST00000493669 POU5F1BQ06416 359 aa11.59□□□□□ -0.55
PHACTR4-204ENST00000493669 MCL1Q07820 350 aa11.59□□□□□ -0.55
PHACTR4-204ENST00000493669 MKRN4PQ13434 485 aaPredicted RBP11.59□□□□□ -0.55
PHACTR4-204ENST00000493669 TERF2Q15554 542 aa11.59□□□□□ -0.55
PHACTR4-204ENST00000493669 CLEC16AQ2KHT3 1053 aa11.59□□□□□ -0.55
PHACTR4-204ENST00000493669 HSP90B2PQ58FF3 399 aa11.59□□□□□ -0.55
PHACTR4-204ENST00000493669 ZNF484Q5JVG2 852 aa11.59□□□□□ -0.55
PHACTR4-204ENST00000493669 TAF3Q5VWG9 929 aa11.59□□□□□ -0.55
PHACTR4-204ENST00000493669 TRIM72Q6ZMU5 477 aa11.59□□□□□ -0.55
PHACTR4-204ENST00000493669 UBL4BQ8N7F7 174 aa11.59□□□□□ -0.55
PHACTR4-204ENST00000493669 KRT12Q99456 494 aa11.59□□□□□ -0.55
PHACTR4-204ENST00000493669 EFCC1Q9HA90 598 aa11.59□□□□□ -0.55
PHACTR4-204ENST00000493669 ERAP1Q9NZ08 941 aa11.59□□□□□ -0.55
PHACTR4-204ENST00000493669 HPCAL4Q9UM19 191 aa11.59□□□□□ -0.55
PHACTR4-204ENST00000493669 CNTN6Q9UQ52 1028 aa11.59□□□□□ -0.55
PHACTR4-204ENST00000493669 PDHXO00330 501 aa11.58□□□□□ -0.55
PHACTR4-204ENST00000493669 OGTO15294 1046 aa11.58□□□□□ -0.55
PHACTR4-204ENST00000493669 FAM189A1O60320 539 aa11.58□□□□□ -0.55
PHACTR4-204ENST00000493669 GRIN3BO60391 1043 aa11.58□□□□□ -0.55
PHACTR4-204ENST00000493669 ZMYND10O75800 440 aa11.58□□□□□ -0.55
PHACTR4-204ENST00000493669 HEXIM1O94992 359 aaKnown RBP11.58□□□□□ -0.55
PHACTR4-204ENST00000493669 VNN1O95497 513 aa11.58□□□□□ -0.55
PHACTR4-204ENST00000493669 EDN1P05305 212 aa11.58□□□□□ -0.55
PHACTR4-204ENST00000493669 MYBL2P10244 700 aa11.58□□□□□ -0.55
PHACTR4-204ENST00000493669 KRT5P13647 590 aa11.58□□□□□ -0.55
PHACTR4-204ENST00000493669 HSPA6P17066 643 aa11.58□□□□□ -0.55
PHACTR4-204ENST00000493669 MARK3P27448 753 aa11.58□□□□□ -0.55
PHACTR4-204ENST00000493669 DRP2Q13474 957 aa11.58□□□□□ -0.55
PHACTR4-204ENST00000493669 TRIM50Q86XT4 487 aa11.58□□□□□ -0.55
PHACTR4-204ENST00000493669 FAM71BQ8TC56 605 aa11.58□□□□□ -0.55
PHACTR4-204ENST00000493669 MS4A4AQ96JQ5 239 aa11.58□□□□□ -0.55
PHACTR4-204ENST00000493669 TRPC6Q9Y210 931 aa11.58□□□□□ -0.55
PHACTR4-204ENST00000493669 GH1P01241 217 aa11.58□□□□□ -0.56
PHACTR4-204ENST00000493669 CYP2C8P10632 490 aa11.58□□□□□ -0.56
PHACTR4-204ENST00000493669 ARHGAP1Q07960 439 aa11.58□□□□□ -0.56
PHACTR4-204ENST00000493669 CUL2Q13617 745 aa11.58□□□□□ -0.56
PHACTR4-204ENST00000493669 TSHZ1Q6ZSZ6 1077 aa11.58□□□□□ -0.56
PHACTR4-204ENST00000493669 RNF149Q8NC42 400 aa11.58□□□□□ -0.56
PHACTR4-204ENST00000493669 PI4K2AQ9BTU6 479 aa11.58□□□□□ -0.56
PHACTR4-204ENST00000493669 IMPG2Q9BZV3 1241 aa11.58□□□□□ -0.56
PHACTR4-204ENST00000493669 WNT8AQ9H1J5 351 aa11.58□□□□□ -0.56
PHACTR4-204ENST00000493669 AVENQ9NQS1 362 aaPredicted RBP11.58□□□□□ -0.56
PHACTR4-204ENST00000493669 ALG6Q9Y672 507 aa11.58□□□□□ -0.56
PHACTR4-204ENST00000493669 COL1A2P08123 1366 aa11.58□□□□□ -0.56
PHACTR4-204ENST00000493669 PTPRJQ12913 1337 aa11.58□□□□□ -0.56
PHACTR4-204ENST00000493669 PLXNB2O15031 1838 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms