RNA–Protein interactions for RNA: ENST00000493427.1

ABCD4-215, Transcript of ATP binding cassette subfamily D member 4, human

TSL 4

Gene ABCD4, Length 736 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCD4-215	ENST00000493427	STAG2	Q8N3U4	1231 aa		13.87	□□□□□ -0.19
ABCD4-215	ENST00000493427	MBOAT7	Q96N66	472 aa		13.87	□□□□□ -0.19
ABCD4-215	ENST00000493427	SLC4A5	Q9BY07	1137 aa		13.87	□□□□□ -0.19
ABCD4-215	ENST00000493427	APOBEC2	Q9Y235	224 aa	Known RBP	13.87	□□□□□ -0.19
ABCD4-215	ENST00000493427	SPTBN1	Q01082	2364 aa	Known RBP	13.86	□□□□□ -0.19
ABCD4-215	ENST00000493427	PALM3	A6NDB9	673 aa	Predicted RBP	13.86	□□□□□ -0.19
ABCD4-215	ENST00000493427	ZNF263	O14978	683 aa		13.86	□□□□□ -0.19
ABCD4-215	ENST00000493427	OPHN1	O60890	802 aa		13.86	□□□□□ -0.19
ABCD4-215	ENST00000493427	C1R	P00736	705 aa		13.86	□□□□□ -0.19
ABCD4-215	ENST00000493427	CD59	P13987	128 aa		13.86	□□□□□ -0.19
ABCD4-215	ENST00000493427	KCNA2	P16389	499 aa		13.86	□□□□□ -0.19
ABCD4-215	ENST00000493427	PSMC3	P17980	439 aa		13.86	□□□□□ -0.19
ABCD4-215	ENST00000493427	POU3F2	P20265	443 aa	Predicted RBP	13.86	□□□□□ -0.19
ABCD4-215	ENST00000493427	ATXN3	P54252	364 aa	Predicted RBP	13.86	□□□□□ -0.19
ABCD4-215	ENST00000493427	CXADR	P78310	365 aa		13.86	□□□□□ -0.19
ABCD4-215	ENST00000493427	FAM78A	Q5JUQ0	283 aa		13.86	□□□□□ -0.19
ABCD4-215	ENST00000493427	TMPRSS7	Q7RTY8	843 aa		13.86	□□□□□ -0.19
ABCD4-215	ENST00000493427	SLCO6A1	Q86UG4	719 aa		13.86	□□□□□ -0.19
ABCD4-215	ENST00000493427	RNF168	Q8IYW5	571 aa	Predicted RBP	13.86	□□□□□ -0.19
ABCD4-215	ENST00000493427	RASEF	Q8IZ41	740 aa		13.86	□□□□□ -0.19
ABCD4-215	ENST00000493427	GIMAP8	Q8ND71	665 aa	Predicted RBP	13.86	□□□□□ -0.19
ABCD4-215	ENST00000493427	OR2I1P	Q8NGU4	316 aa		13.86	□□□□□ -0.19
ABCD4-215	ENST00000493427	FAM200A	Q8TCP9	573 aa		13.86	□□□□□ -0.19
ABCD4-215	ENST00000493427	CSGALNACT1	Q8TDX6	532 aa		13.86	□□□□□ -0.19
ABCD4-215	ENST00000493427	RSPH1	Q8WYR4	309 aa		13.86	□□□□□ -0.19
ABCD4-215	ENST00000493427	TNPO1	Q92973	898 aa	Known RBP	13.86	□□□□□ -0.19
ABCD4-215	ENST00000493427	MSANTD3	Q96H12	275 aa		13.86	□□□□□ -0.19
ABCD4-215	ENST00000493427	AZI2	Q9H6S1	392 aa		13.86	□□□□□ -0.19
ABCD4-215	ENST00000493427	JMJD4	Q9H9V9	463 aa		13.86	□□□□□ -0.19
ABCD4-215	ENST00000493427	LY9	Q9HBG7	655 aa		13.86	□□□□□ -0.19
ABCD4-215	ENST00000493427	VAT1L	Q9HCJ6	419 aa		13.86	□□□□□ -0.19
ABCD4-215	ENST00000493427	MAD2L2	Q9UI95	211 aa		13.86	□□□□□ -0.19
ABCD4-215	ENST00000493427	PCDHB9	Q9Y5E1	797 aa		13.86	□□□□□ -0.19
ABCD4-215	ENST00000493427	ERICH2	A1L162	156 aa		13.85	□□□□□ -0.19
ABCD4-215	ENST00000493427	ARNTL	O00327	626 aa		13.85	□□□□□ -0.19
ABCD4-215	ENST00000493427	PRC1	O43663	620 aa		13.85	□□□□□ -0.19
ABCD4-215	ENST00000493427	SH3BP5	O60239	455 aa		13.85	□□□□□ -0.19
ABCD4-215	ENST00000493427	OFD1	O75665	1012 aa		13.85	□□□□□ -0.19
ABCD4-215	ENST00000493427	ALDH2	P05091	517 aa		13.85	□□□□□ -0.19
ABCD4-215	ENST00000493427	ADSS	P30520	456 aa		13.85	□□□□□ -0.19
ABCD4-215	ENST00000493427	MCM5	P33992	734 aa		13.85	□□□□□ -0.19
ABCD4-215	ENST00000493427	GRM4	Q14833	912 aa		13.85	□□□□□ -0.19
ABCD4-215	ENST00000493427	SART3	Q15020	963 aa	Known RBP	13.85	□□□□□ -0.19
ABCD4-215	ENST00000493427	MAPK6	Q16659	721 aa		13.85	□□□□□ -0.19
ABCD4-215	ENST00000493427	SLC35G1	Q2M3R5	365 aa		13.85	□□□□□ -0.19
ABCD4-215	ENST00000493427	C1orf228	Q6PIY5	440 aa		13.85	□□□□□ -0.19
ABCD4-215	ENST00000493427	ZNF574	Q6ZN55	896 aa	Predicted RBP	13.85	□□□□□ -0.19
ABCD4-215	ENST00000493427	AGMO	Q6ZNB7	445 aa		13.85	□□□□□ -0.19
ABCD4-215	ENST00000493427	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
ABCD4-215	ENST00000493427	ZNF668	Q96K58	619 aa	Predicted RBP	13.85	□□□□□ -0.19
ABCD4-215	ENST00000493427	MTA3	Q9BTC8	594 aa		13.85	□□□□□ -0.19
ABCD4-215	ENST00000493427	APOL6	Q9BWW8	343 aa		13.85	□□□□□ -0.19
ABCD4-215	ENST00000493427	MAP3K20	Q9NYL2	800 aa	Known RBP	13.85	□□□□□ -0.19
ABCD4-215	ENST00000493427	NCAN	O14594	1321 aa		13.85	□□□□□ -0.19
ABCD4-215	ENST00000493427	FRMPD4	Q14CM0	1322 aa		13.85	□□□□□ -0.19
ABCD4-215	ENST00000493427	KLRF2	D3W0D1	207 aa		13.84	□□□□□ -0.19
ABCD4-215	ENST00000493427		F8W810	466 aa		13.84	□□□□□ -0.19
ABCD4-215	ENST00000493427	SPECC1L-ADORA2A	F8WAN1	911 aa		13.84	□□□□□ -0.19
ABCD4-215	ENST00000493427	GCOM1	H8Y6P7	765 aa	Predicted RBP	13.84	□□□□□ -0.19
ABCD4-215	ENST00000493427	SH2B2	O14492	632 aa	Predicted RBP	13.84	□□□□□ -0.19
ABCD4-215	ENST00000493427	TLX3	O43711	291 aa	Predicted RBP	13.84	□□□□□ -0.19
ABCD4-215	ENST00000493427	ZNF862	O60290	1169 aa		13.84	□□□□□ -0.19
ABCD4-215	ENST00000493427	POLR2M	P0CAP2	368 aa		13.84	□□□□□ -0.19
ABCD4-215	ENST00000493427	BCKDHB	P21953	392 aa		13.84	□□□□□ -0.19
ABCD4-215	ENST00000493427	HOXA9	P31269	272 aa		13.84	□□□□□ -0.19
ABCD4-215	ENST00000493427	CTH	P32929	405 aa		13.84	□□□□□ -0.19
ABCD4-215	ENST00000493427	PHKA2	P46019	1235 aa		13.84	□□□□□ -0.19
ABCD4-215	ENST00000493427	CAMK2B	Q13554	666 aa		13.84	□□□□□ -0.19
ABCD4-215	ENST00000493427	TSGA10IP	Q3SY00	556 aa		13.84	□□□□□ -0.19
ABCD4-215	ENST00000493427	RNF20	Q5VTR2	975 aa		13.84	□□□□□ -0.19
ABCD4-215	ENST00000493427	SYNPO	Q8N3V7	929 aa		13.84	□□□□□ -0.19
ABCD4-215	ENST00000493427	TTC8	Q8TAM2	541 aa		13.84	□□□□□ -0.19
ABCD4-215	ENST00000493427	SLC7A14	Q8TBB6	771 aa		13.84	□□□□□ -0.19
ABCD4-215	ENST00000493427	URGCP	Q8TCY9	931 aa		13.84	□□□□□ -0.19
ABCD4-215	ENST00000493427	MTMR8	Q96EF0	704 aa		13.84	□□□□□ -0.19
ABCD4-215	ENST00000493427	FAM193B	Q96PV7	902 aa	Predicted RBP	13.84	□□□□□ -0.19
ABCD4-215	ENST00000493427	TMEM175	Q9BSA9	504 aa		13.84	□□□□□ -0.19
ABCD4-215	ENST00000493427	AMN	Q9BXJ7	453 aa		13.84	□□□□□ -0.19
ABCD4-215	ENST00000493427	C8orf33	Q9H7E9	229 aa	Predicted RBP	13.84	□□□□□ -0.19
ABCD4-215	ENST00000493427	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	13.84	□□□□□ -0.19
ABCD4-215	ENST00000493427	DACT1	Q9NYF0	836 aa		13.84	□□□□□ -0.19
ABCD4-215	ENST00000493427	SEPT9	Q9UHD8	586 aa	Predicted RBP	13.84	□□□□□ -0.19
ABCD4-215	ENST00000493427	ATXN2	Q99700	1313 aa	Known RBP	13.84	□□□□□ -0.19
ABCD4-215	ENST00000493427	SETD2	Q9BYW2	2564 aa	Predicted RBP	13.83	□□□□□ -0.19
ABCD4-215	ENST00000493427	TNRC6B	Q9UPQ9	1833 aa	Known RBP	13.83	□□□□□ -0.2
ABCD4-215	ENST00000493427	FAM149A	A5PLN7	773 aa		13.83	□□□□□ -0.2
ABCD4-215	ENST00000493427	PPP1R11	O60927	126 aa	Predicted RBP	13.83	□□□□□ -0.2
ABCD4-215	ENST00000493427	AFF1	P51825	1210 aa	Known RBP	13.83	□□□□□ -0.2
ABCD4-215	ENST00000493427	SERINC3	Q13530	473 aa		13.83	□□□□□ -0.2
ABCD4-215	ENST00000493427	ADCK5	Q3MIX3	580 aa		13.83	□□□□□ -0.2
ABCD4-215	ENST00000493427	HIST2H2BC	Q6DN03	193 aa		13.83	□□□□□ -0.2
ABCD4-215	ENST00000493427	ZNF654	Q8IZM8	581 aa		13.83	□□□□□ -0.2
ABCD4-215	ENST00000493427	CAMKK1	Q8N5S9	505 aa		13.83	□□□□□ -0.2
ABCD4-215	ENST00000493427	KCNB2	Q92953	911 aa		13.83	□□□□□ -0.2
ABCD4-215	ENST00000493427	TMEM87B	Q96K49	555 aa		13.83	□□□□□ -0.2
ABCD4-215	ENST00000493427	HSPBP1	Q9NZL4	362 aa		13.83	□□□□□ -0.2
ABCD4-215	ENST00000493427	FNIP2	Q9P278	1114 aa		13.83	□□□□□ -0.2
ABCD4-215	ENST00000493427	MYBPHL	A2RUH7	354 aa		13.82	□□□□□ -0.2
ABCD4-215	ENST00000493427	RRP8	O43159	456 aa	Known RBP	13.82	□□□□□ -0.2
ABCD4-215	ENST00000493427	CYTH3	O43739	400 aa		13.82	□□□□□ -0.2

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