RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 ATRIPQ8WXE1 791 aa12.17□□□□□ -0.46
SNRNP200-207ENST00000493271 ADPGKQ9BRR6 497 aa12.17□□□□□ -0.46
SNRNP200-207ENST00000493271 IER2Q9BTL4 223 aa12.17□□□□□ -0.46
SNRNP200-207ENST00000493271 LTB4R2Q9NPC1 389 aa12.17□□□□□ -0.46
SNRNP200-207ENST00000493271 ZSCAN32Q9NX65 697 aa12.17□□□□□ -0.46
SNRNP200-207ENST00000493271 GDE1Q9NZC3 331 aa12.17□□□□□ -0.46
SNRNP200-207ENST00000493271 MIA3Q5JRA6 1907 aa12.16□□□□□ -0.46
SNRNP200-207ENST00000493271 POTEMA6NI47 508 aa12.16□□□□□ -0.46
SNRNP200-207ENST00000493271 FAM170BA6NMN3 283 aa12.16□□□□□ -0.46
SNRNP200-207ENST00000493271 TMEM189-UBE2V1I3L0A0 370 aa12.16□□□□□ -0.46
SNRNP200-207ENST00000493271 ZBTB39O15060 712 aa12.16□□□□□ -0.46
SNRNP200-207ENST00000493271 B4GALT5O43286 388 aa12.16□□□□□ -0.46
SNRNP200-207ENST00000493271 TRAPPC3O43617 180 aa12.16□□□□□ -0.46
SNRNP200-207ENST00000493271 TBC1D4O60343 1298 aa12.16□□□□□ -0.46
SNRNP200-207ENST00000493271 ECI2O75521 394 aa12.16□□□□□ -0.46
SNRNP200-207ENST00000493271 KIF4AO95239 1232 aa12.16□□□□□ -0.46
SNRNP200-207ENST00000493271 RBM25P49756 843 aaKnown RBP12.16□□□□□ -0.46
SNRNP200-207ENST00000493271 LMNB2Q03252 620 aa12.16□□□□□ -0.46
SNRNP200-207ENST00000493271 PPP2R5DQ14738 602 aa12.16□□□□□ -0.46
SNRNP200-207ENST00000493271 UBXN2BQ14CS0 331 aa12.16□□□□□ -0.46
SNRNP200-207ENST00000493271 PABPC1LQ4VXU2 614 aaKnown RBP12.16□□□□□ -0.46
SNRNP200-207ENST00000493271 CDCA2Q69YH5 1023 aaPredicted RBP12.16□□□□□ -0.46
SNRNP200-207ENST00000493271 POTEGQ6S5H5 508 aa12.16□□□□□ -0.46
SNRNP200-207ENST00000493271 CEP57Q86XR8 500 aa12.16□□□□□ -0.46
SNRNP200-207ENST00000493271 SLC7A14Q8TBB6 771 aa12.16□□□□□ -0.46
SNRNP200-207ENST00000493271 NELL1Q92832 810 aa12.16□□□□□ -0.46
SNRNP200-207ENST00000493271 DNASE1L2Q92874 299 aa12.16□□□□□ -0.46
SNRNP200-207ENST00000493271 CLDN23Q96B33 292 aa12.16□□□□□ -0.46
SNRNP200-207ENST00000493271 POLR3FQ9H1D9 316 aaPredicted RBP12.16□□□□□ -0.46
SNRNP200-207ENST00000493271 EPC1Q9H2F5 836 aa12.16□□□□□ -0.46
SNRNP200-207ENST00000493271 FZD8Q9H461 694 aa12.16□□□□□ -0.46
SNRNP200-207ENST00000493271 AVENQ9NQS1 362 aaPredicted RBP12.16□□□□□ -0.46
SNRNP200-207ENST00000493271 KLK14Q9P0G3 267 aa12.16□□□□□ -0.46
SNRNP200-207ENST00000493271 POLIQ9UNA4 740 aa12.16□□□□□ -0.46
SNRNP200-207ENST00000493271 CASTOR2A6NHX0 329 aa12.15□□□□□ -0.46
SNRNP200-207ENST00000493271 LRRIQ4A6NIV6 560 aa12.15□□□□□ -0.46
SNRNP200-207ENST00000493271 PTGESO14684 152 aa12.15□□□□□ -0.46
SNRNP200-207ENST00000493271 LILRB5O75023 590 aa12.15□□□□□ -0.46
SNRNP200-207ENST00000493271 KRT2P35908 639 aa12.15□□□□□ -0.46
SNRNP200-207ENST00000493271 STK3Q13188 491 aa12.15□□□□□ -0.46
SNRNP200-207ENST00000493271 CALCRLQ16602 461 aa12.15□□□□□ -0.46
SNRNP200-207ENST00000493271 MAPK6Q16659 721 aa12.15□□□□□ -0.46
SNRNP200-207ENST00000493271 RSPO4Q2I0M5 234 aaPredicted RBP12.15□□□□□ -0.46
SNRNP200-207ENST00000493271 AXDND1Q5T1B0 1012 aaPredicted RBP12.15□□□□□ -0.46
SNRNP200-207ENST00000493271 ZNF852Q6ZMS4 543 aa12.15□□□□□ -0.46
SNRNP200-207ENST00000493271 ANKS3Q6ZW76 656 aa12.15□□□□□ -0.46
SNRNP200-207ENST00000493271 APBB1IPQ7Z5R6 666 aaPredicted RBP12.15□□□□□ -0.46
SNRNP200-207ENST00000493271 NPAS3Q8IXF0 933 aa12.15□□□□□ -0.46
SNRNP200-207ENST00000493271 DCLK2Q8N568 766 aa12.15□□□□□ -0.46
SNRNP200-207ENST00000493271 UROC1Q96N76 676 aa12.15□□□□□ -0.46
SNRNP200-207ENST00000493271 PAAF1Q9BRP4 392 aa12.15□□□□□ -0.46
SNRNP200-207ENST00000493271 RPP25Q9BUL9 199 aaKnown RBP12.15□□□□□ -0.46
SNRNP200-207ENST00000493271 TTC12Q9H892 705 aaPredicted RBP12.15□□□□□ -0.46
SNRNP200-207ENST00000493271 MRPS23Q9Y3D9 190 aaKnown RBP12.15□□□□□ -0.46
SNRNP200-207ENST00000493271 BACE2Q9Y5Z0 518 aa12.15□□□□□ -0.46
SNRNP200-207ENST00000493271 MYH15Q9Y2K3 1946 aa12.15□□□□□ -0.46
SNRNP200-207ENST00000493271 CEP250Q9BV73 2442 aa12.14□□□□□ -0.47
SNRNP200-207ENST00000493271 MAN2B1O00754 1011 aa12.14□□□□□ -0.47
SNRNP200-207ENST00000493271 CCL16O15467 120 aa12.14□□□□□ -0.47
SNRNP200-207ENST00000493271 NEMFO60524 1076 aa12.14□□□□□ -0.47
SNRNP200-207ENST00000493271 LRRN2O75325 713 aa12.14□□□□□ -0.47
SNRNP200-207ENST00000493271 RECQL4O94761 1208 aa12.14□□□□□ -0.47
SNRNP200-207ENST00000493271 MICAL2O94851 1124 aa12.14□□□□□ -0.47
SNRNP200-207ENST00000493271 FGFR3P22607 806 aa12.14□□□□□ -0.47
SNRNP200-207ENST00000493271 NRLP54845 237 aa12.14□□□□□ -0.47
SNRNP200-207ENST00000493271 NTHL1P78549 312 aa12.14□□□□□ -0.47
SNRNP200-207ENST00000493271 CSTF1Q05048 431 aaKnown RBP12.14□□□□□ -0.47
SNRNP200-207ENST00000493271 ADCY1Q08828 1119 aa12.14□□□□□ -0.47
SNRNP200-207ENST00000493271 SCRN1Q12765 414 aa12.14□□□□□ -0.47
SNRNP200-207ENST00000493271 PRPF4BQ13523 1007 aaKnown RBP12.14□□□□□ -0.47
SNRNP200-207ENST00000493271 PPP2R5AQ15172 486 aa12.14□□□□□ -0.47
SNRNP200-207ENST00000493271 TMEM132AQ24JP5 1023 aa12.14□□□□□ -0.47
SNRNP200-207ENST00000493271 DCAF4L1Q3SXM0 396 aa12.14□□□□□ -0.47
SNRNP200-207ENST00000493271 MAMSTRQ6ZN01 415 aa12.14□□□□□ -0.47
SNRNP200-207ENST00000493271 CDR2LQ86X02 465 aaPredicted RBP12.14□□□□□ -0.47
SNRNP200-207ENST00000493271 HASPINQ8TF76 798 aa12.14□□□□□ -0.47
SNRNP200-207ENST00000493271 RTKNQ9BST9 563 aa12.14□□□□□ -0.47
SNRNP200-207ENST00000493271 TUFT1Q9NNX1 390 aa12.14□□□□□ -0.47
SNRNP200-207ENST00000493271 PRMT8Q9NR22 394 aaPredicted RBP12.14□□□□□ -0.47
SNRNP200-207ENST00000493271 PDRG1Q9NUG6 133 aa12.14□□□□□ -0.47
SNRNP200-207ENST00000493271 MTRRQ9UBK8 725 aa12.14□□□□□ -0.47
SNRNP200-207ENST00000493271 SMG5Q9UPR3 1016 aaKnown RBP12.14□□□□□ -0.47
SNRNP200-207ENST00000493271 PATJQ8NI35 1801 aa12.14□□□□□ -0.47
SNRNP200-207ENST00000493271 ACKR2O00590 384 aa12.13□□□□□ -0.47
SNRNP200-207ENST00000493271 USO1O60763 962 aaKnown RBP12.13□□□□□ -0.47
SNRNP200-207ENST00000493271 PFKFB2O60825 505 aa12.13□□□□□ -0.47
SNRNP200-207ENST00000493271 ATP2B1P20020 1258 aa12.13□□□□□ -0.47
SNRNP200-207ENST00000493271 OR1D2P34982 312 aa12.13□□□□□ -0.47
SNRNP200-207ENST00000493271 NAMPTP43490 491 aa12.13□□□□□ -0.47
SNRNP200-207ENST00000493271 EFNA5P52803 228 aa12.13□□□□□ -0.47
SNRNP200-207ENST00000493271 NAB2Q15742 525 aa12.13□□□□□ -0.47
SNRNP200-207ENST00000493271 TPRG1Q6ZUI0 275 aa12.13□□□□□ -0.47
SNRNP200-207ENST00000493271 SKAP1Q86WV1 359 aa12.13□□□□□ -0.47
SNRNP200-207ENST00000493271 ITFG1Q8TB96 612 aa12.13□□□□□ -0.47
SNRNP200-207ENST00000493271 OXER1Q8TDS5 423 aa12.13□□□□□ -0.47
SNRNP200-207ENST00000493271 RABGGTAQ92696 567 aa12.13□□□□□ -0.47
SNRNP200-207ENST00000493271 ELSPBP1Q96BH3 223 aa12.13□□□□□ -0.47
SNRNP200-207ENST00000493271 NACC1Q96RE7 527 aa12.13□□□□□ -0.47
SNRNP200-207ENST00000493271 KXD1Q9BQD3 176 aa12.13□□□□□ -0.47
SNRNP200-207ENST00000493271 PDZD7Q9H5P4 517 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms