RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 GRM5P41594 1212 aa13.68□□□□□ -0.22
COL6A1-205ENST00000492851 STRN3Q13033 797 aa13.68□□□□□ -0.22
COL6A1-205ENST00000492851 UVSSAQ2YD98 709 aa13.68□□□□□ -0.22
COL6A1-205ENST00000492851 NT5DC1Q5TFE4 455 aa13.68□□□□□ -0.22
COL6A1-205ENST00000492851 LIN9Q5TKA1 542 aa13.68□□□□□ -0.22
COL6A1-205ENST00000492851 RINT1Q6NUQ1 792 aa13.68□□□□□ -0.22
COL6A1-205ENST00000492851 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.68□□□□□ -0.22
COL6A1-205ENST00000492851 CEP57Q86XR8 500 aa13.68□□□□□ -0.22
COL6A1-205ENST00000492851 PRSS33Q8NF86 280 aa13.68□□□□□ -0.22
COL6A1-205ENST00000492851 LNX1Q8TBB1 728 aaPredicted RBP13.68□□□□□ -0.22
COL6A1-205ENST00000492851 CDK5RAP3Q96JB5 506 aa13.68□□□□□ -0.22
COL6A1-205ENST00000492851 AK8Q96MA6 479 aa13.68□□□□□ -0.22
COL6A1-205ENST00000492851 ACO2Q99798 780 aaKnown RBP13.68□□□□□ -0.22
COL6A1-205ENST00000492851 TCHPQ9BT92 498 aa13.68□□□□□ -0.22
COL6A1-205ENST00000492851 DUSP12Q9UNI6 340 aa13.68□□□□□ -0.22
COL6A1-205ENST00000492851 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.68□□□□□ -0.22
COL6A1-205ENST00000492851 HIP1RO75146 1068 aa13.67□□□□□ -0.22
COL6A1-205ENST00000492851 XYLBO75191 536 aa13.67□□□□□ -0.22
COL6A1-205ENST00000492851 RFPL2O75678 378 aa13.67□□□□□ -0.22
COL6A1-205ENST00000492851 KIF4AO95239 1232 aa13.67□□□□□ -0.22
COL6A1-205ENST00000492851 SPATA31D3P0C874 917 aa13.67□□□□□ -0.22
COL6A1-205ENST00000492851 MCF2P10911 925 aa13.67□□□□□ -0.22
COL6A1-205ENST00000492851 HOXA9P31269 272 aa13.67□□□□□ -0.22
COL6A1-205ENST00000492851 ATP2C1P98194 919 aaPredicted RBP13.67□□□□□ -0.22
COL6A1-205ENST00000492851 NAB2Q15742 525 aa13.67□□□□□ -0.22
COL6A1-205ENST00000492851 PSMD5Q16401 504 aa13.67□□□□□ -0.22
COL6A1-205ENST00000492851 RTP2Q5QGT7 225 aa13.67□□□□□ -0.22
COL6A1-205ENST00000492851 HYIQ5T013 277 aa13.67□□□□□ -0.22
COL6A1-205ENST00000492851 EEF1DP3Q658K8 133 aa13.67□□□□□ -0.22
COL6A1-205ENST00000492851 ASTLQ6HA08 431 aaPredicted RBP13.67□□□□□ -0.22
COL6A1-205ENST00000492851 SPATA31D4Q6ZUB0 917 aa13.67□□□□□ -0.22
COL6A1-205ENST00000492851 C1orf186Q6ZWK4 172 aa13.67□□□□□ -0.22
COL6A1-205ENST00000492851 SYT2Q8N9I0 419 aaPredicted RBP13.67□□□□□ -0.22
COL6A1-205ENST00000492851 SPIRE2Q8WWL2 714 aa13.67□□□□□ -0.22
COL6A1-205ENST00000492851 RABGGTAQ92696 567 aa13.67□□□□□ -0.22
COL6A1-205ENST00000492851 TMX3Q96JJ7 454 aa13.67□□□□□ -0.22
COL6A1-205ENST00000492851 B3GALT6Q96L58 329 aa13.67□□□□□ -0.22
COL6A1-205ENST00000492851 ACAP3Q96P50 834 aa13.67□□□□□ -0.22
COL6A1-205ENST00000492851 PPP1R10Q96QC0 940 aaKnown RBP13.67□□□□□ -0.22
COL6A1-205ENST00000492851 CLSTN3Q9BQT9 956 aa13.67□□□□□ -0.22
COL6A1-205ENST00000492851 PAAF1Q9BRP4 392 aa13.67□□□□□ -0.22
COL6A1-205ENST00000492851 KIFC3Q9BVG8 833 aa13.67□□□□□ -0.22
COL6A1-205ENST00000492851 PTPRHQ9HD43 1115 aa13.67□□□□□ -0.22
COL6A1-205ENST00000492851 ARHGAP28Q9P2N2 729 aa13.67□□□□□ -0.22
COL6A1-205ENST00000492851 WNT16Q9UBV4 365 aa13.67□□□□□ -0.22
COL6A1-205ENST00000492851 FBXL21Q9UKT6 434 aa13.67□□□□□ -0.22
COL6A1-205ENST00000492851 TECTAO75443 2155 aa13.66□□□□□ -0.22
COL6A1-205ENST00000492851 SMIM28A0A1B0GU29 152 aa13.66□□□□□ -0.22
COL6A1-205ENST00000492851 GALR2O43603 387 aaPredicted RBP13.66□□□□□ -0.22
COL6A1-205ENST00000492851 BMP15O95972 392 aa13.66□□□□□ -0.22
COL6A1-205ENST00000492851 POU2F2P09086 479 aa13.66□□□□□ -0.22
COL6A1-205ENST00000492851 GJB2P29033 226 aa13.66□□□□□ -0.22
COL6A1-205ENST00000492851 RPL9P32969 192 aaKnown RBP13.66□□□□□ -0.22
COL6A1-205ENST00000492851 VCPP55072 806 aaKnown RBP13.66□□□□□ -0.22
COL6A1-205ENST00000492851 TCF15Q12870 199 aa13.66□□□□□ -0.22
COL6A1-205ENST00000492851 RAB33AQ14088 237 aa13.66□□□□□ -0.22
COL6A1-205ENST00000492851 IL17AQ16552 155 aa13.66□□□□□ -0.22
COL6A1-205ENST00000492851 UPP1Q16831 310 aa13.66□□□□□ -0.22
COL6A1-205ENST00000492851 ZNF568Q3ZCX4 644 aa13.66□□□□□ -0.22
COL6A1-205ENST00000492851 XKR4Q5GH76 650 aa13.66□□□□□ -0.22
COL6A1-205ENST00000492851 PPM1LQ5SGD2 360 aa13.66□□□□□ -0.22
COL6A1-205ENST00000492851 PRSS55Q6UWB4 352 aaPredicted RBP13.66□□□□□ -0.22
COL6A1-205ENST00000492851 ALKAL1Q6UXT8 129 aa13.66□□□□□ -0.22
COL6A1-205ENST00000492851 ANKS3Q6ZW76 656 aa13.66□□□□□ -0.22
COL6A1-205ENST00000492851 HASPINQ8TF76 798 aa13.66□□□□□ -0.22
COL6A1-205ENST00000492851 ATOH1Q92858 354 aaPredicted RBP13.66□□□□□ -0.22
COL6A1-205ENST00000492851 ZNF707Q96C28 371 aaPredicted RBP13.66□□□□□ -0.22
COL6A1-205ENST00000492851 POLD4Q9HCU8 107 aa13.66□□□□□ -0.22
COL6A1-205ENST00000492851 LARSQ9P2J5 1176 aaKnown RBP13.66□□□□□ -0.22
COL6A1-205ENST00000492851 FBXW11Q9UKB1 542 aa13.66□□□□□ -0.22
COL6A1-205ENST00000492851 SMC3Q9UQE7 1217 aa13.66□□□□□ -0.22
COL6A1-205ENST00000492851 BACE2Q9Y5Z0 518 aa13.66□□□□□ -0.22
COL6A1-205ENST00000492851 TRIOO75962 3097 aa13.65□□□□□ -0.22
COL6A1-205ENST00000492851 PP2D1A8MPX8 630 aa13.65□□□□□ -0.22
COL6A1-205ENST00000492851 TOM1L1O75674 476 aa13.65□□□□□ -0.22
COL6A1-205ENST00000492851 LAMP2P13473 410 aa13.65□□□□□ -0.22
COL6A1-205ENST00000492851 PLS3P13797 630 aa13.65□□□□□ -0.22
COL6A1-205ENST00000492851 RPL17P18621 184 aaKnown RBP13.65□□□□□ -0.22
COL6A1-205ENST00000492851 FGFR3P22607 806 aa13.65□□□□□ -0.22
COL6A1-205ENST00000492851 CDC25AP30304 524 aa13.65□□□□□ -0.22
COL6A1-205ENST00000492851 ABCD1P33897 745 aa13.65□□□□□ -0.22
COL6A1-205ENST00000492851 CLCNKBP51801 687 aa13.65□□□□□ -0.22
COL6A1-205ENST00000492851 ZRSR1Q15695 479 aaKnown RBP13.65□□□□□ -0.22
COL6A1-205ENST00000492851 KYAT1Q16773 422 aa13.65□□□□□ -0.22
COL6A1-205ENST00000492851 MPZL3Q6UWV2 235 aa13.65□□□□□ -0.22
COL6A1-205ENST00000492851 ZPBP2Q6X784 338 aa13.65□□□□□ -0.22
COL6A1-205ENST00000492851 GLYCTKQ8IVS8 523 aa13.65□□□□□ -0.22
COL6A1-205ENST00000492851 DAW1Q8N136 415 aa13.65□□□□□ -0.22
COL6A1-205ENST00000492851 RTP3Q9BQQ7 232 aa13.65□□□□□ -0.22
COL6A1-205ENST00000492851 MMTAG2Q9BU76 263 aaKnown RBP13.65□□□□□ -0.22
COL6A1-205ENST00000492851 CDT1Q9H211 546 aa13.65□□□□□ -0.22
COL6A1-205ENST00000492851 USP20Q9Y2K6 914 aa13.65□□□□□ -0.22
COL6A1-205ENST00000492851 MUC6Q6W4X9 2439 aa13.64□□□□□ -0.23
COL6A1-205ENST00000492851 VWA3AA6NCI4 1184 aa13.64□□□□□ -0.23
COL6A1-205ENST00000492851 PDGFBP01127 241 aaPredicted RBP13.64□□□□□ -0.23
COL6A1-205ENST00000492851 EDN1P05305 212 aa13.64□□□□□ -0.23
COL6A1-205ENST00000492851 C8AP07357 584 aa13.64□□□□□ -0.23
COL6A1-205ENST00000492851 KCNE1P15382 129 aa13.64□□□□□ -0.23
COL6A1-205ENST00000492851 PROZP22891 400 aa13.64□□□□□ -0.23
COL6A1-205ENST00000492851 FSHRP23945 695 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms