RNA–Protein interactions for RNA: ENST00000490668.5

SFPQ-210, Transcript of splicing factor proline and glutamine rich, human

TSL 2

Gene SFPQ, Length 434 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFPQ-210	ENST00000490668	BSND	Q8WZ55	320 aa		4.91	□□□□□ -1.62
SFPQ-210	ENST00000490668	WASF1	Q92558	559 aa		4.91	□□□□□ -1.62
SFPQ-210	ENST00000490668	GTF3C6	Q969F1	213 aa		4.91	□□□□□ -1.62
SFPQ-210	ENST00000490668	KCTD12	Q96CX2	325 aa	Known RBP	4.91	□□□□□ -1.62
SFPQ-210	ENST00000490668	MAML3	Q96JK9	1138 aa		4.91	□□□□□ -1.62
SFPQ-210	ENST00000490668	MRGPRX3	Q96LB0	322 aa		4.91	□□□□□ -1.62
SFPQ-210	ENST00000490668	SGCZ	Q96LD1	299 aa		4.91	□□□□□ -1.62
SFPQ-210	ENST00000490668	ZSCAN31	Q96LW9	406 aa	Predicted RBP	4.91	□□□□□ -1.62
SFPQ-210	ENST00000490668	EIF2AK1	Q9BQI3	630 aa	Known RBP	4.91	□□□□□ -1.62
SFPQ-210	ENST00000490668	SLC26A6	Q9BXS9	759 aa		4.91	□□□□□ -1.62
SFPQ-210	ENST00000490668	CSRNP2	Q9H175	543 aa		4.91	□□□□□ -1.62
SFPQ-210	ENST00000490668	SMOC1	Q9H4F8	434 aa		4.91	□□□□□ -1.62
SFPQ-210	ENST00000490668	EMC7	Q9NPA0	242 aa		4.91	□□□□□ -1.62
SFPQ-210	ENST00000490668	SH2B1	Q9NRF2	756 aa	Predicted RBP	4.91	□□□□□ -1.62
SFPQ-210	ENST00000490668	TRMT13	Q9NUP7	481 aa	Known RBP	4.91	□□□□□ -1.62
SFPQ-210	ENST00000490668	CYP39A1	Q9NYL5	469 aa		4.91	□□□□□ -1.62
SFPQ-210	ENST00000490668	EVL	Q9UI08	416 aa	Predicted RBP	4.91	□□□□□ -1.62
SFPQ-210	ENST00000490668	HCN2	Q9UL51	889 aa		4.91	□□□□□ -1.62
SFPQ-210	ENST00000490668	TPCN1	Q9ULQ1	816 aa		4.91	□□□□□ -1.62
SFPQ-210	ENST00000490668	SOX13	Q9UN79	622 aa		4.91	□□□□□ -1.62
SFPQ-210	ENST00000490668	GABRQ	Q9UN88	632 aa		4.91	□□□□□ -1.62
SFPQ-210	ENST00000490668	LIMCH1	Q9UPQ0	1083 aa		4.91	□□□□□ -1.62
SFPQ-210	ENST00000490668	CNPY2	Q9Y2B0	182 aa		4.91	□□□□□ -1.62
SFPQ-210	ENST00000490668	DIS3	Q9Y2L1	958 aa	Known RBP	4.91	□□□□□ -1.62
SFPQ-210	ENST00000490668	LRRC37A2	A6NM11	1700 aa		4.91	□□□□□ -1.62
SFPQ-210	ENST00000490668	STK36	Q9NRP7	1315 aa		4.91	□□□□□ -1.62
SFPQ-210	ENST00000490668	hCG_1642624	A0A1W2PR95	340 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	ESYT2	A0FGR8	921 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	ASB14	A6NK59	587 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	SPDYE3	A6NKU9	549 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668		B4DLN1	442 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	GCOM1	H8Y6P7	765 aa	Predicted RBP	4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	TPP1	O14773	563 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	MSC	O60682	206 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	SNX2	O60749	519 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	PFKFB2	O60825	505 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	COBL	O75128	1261 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	LARGE1	O95461	756 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	TP53	P04637	393 aa	Predicted RBP	4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	PGK2	P07205	417 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	POLR2M	P0CAP2	368 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	VDR	P11473	427 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	RAG1	P15918	1043 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	LSS	P48449	732 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	ADCY7	P51828	1080 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	MRPL12	P52815	198 aa	Known RBP	4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	IL2	P60568	153 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	RPS6	P62753	249 aa	Known RBP	4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	BAAT	Q14032	418 aa	Predicted RBP	4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	TRIM14	Q14142	442 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	ZNF267	Q14586	743 aa	Predicted RBP	4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	SF1	Q15637	639 aa	Known RBP	4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	CCL14	Q16627	93 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	PFKFB3	Q16875	520 aa	Predicted RBP	4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	SLC35G1	Q2M3R5	365 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	ZNF792	Q3KQV3	632 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	BBS9	Q3SYG4	887 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	CFAP161	Q6P656	301 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	ARMCX2	Q7L311	632 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	OTOP3	Q7RTS5	596 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	PRICKLE2	Q7Z3G6	844 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	MAATS1	Q7Z4T9	603 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	MSL3	Q8N5Y2	521 aa	Known RBP	4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	CLRN3	Q8NCR9	226 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	DNER	Q8NFT8	737 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	NPLOC4	Q8TAT6	608 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	GPBAR1	Q8TDU6	330 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	CLEC4D	Q8WXI8	215 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	USP6NL	Q92738	828 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	PTPRN2	Q92932	1015 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	PHKB	Q93100	1093 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	AHCYL2	Q96HN2	611 aa	Known RBP	4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	ABHD8	Q96I13	439 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	ZNF333	Q96JL9	665 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	MAGEB10	Q96LZ2	347 aa	Predicted RBP	4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	TBATA	Q96M53	351 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	FGD4	Q96M96	766 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	CRB3	Q9BUF7	120 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	GLT8D2	Q9H1C3	349 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	RUBCNL	Q9H714	662 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	TIMMDC1	Q9NPL8	285 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	PDLIM7	Q9NR12	457 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	DISC1	Q9NRI5	854 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	BARHL2	Q9NY43	387 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	SAMD15	Q9P1V8	674 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	KLHL3	Q9UH77	587 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	GJD2	Q9UKL4	321 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	ZHX1	Q9UKY1	873 aa	Predicted RBP	4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	GPR52	Q9Y2T5	361 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	KIF3A	Q9Y496	699 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	SYNGAP1	Q96PV0	1343 aa		4.9	□□□□□ -1.63
SFPQ-210	ENST00000490668	ZBTB42	B2RXF5	422 aa		4.89	□□□□□ -1.63
SFPQ-210	ENST00000490668		J3QW42	95 aa		4.89	□□□□□ -1.63
SFPQ-210	ENST00000490668	TLR5	O60602	858 aa		4.89	□□□□□ -1.63
SFPQ-210	ENST00000490668	HIP1R	O75146	1068 aa		4.89	□□□□□ -1.63
SFPQ-210	ENST00000490668	CRTAM	O95727	393 aa		4.89	□□□□□ -1.63
SFPQ-210	ENST00000490668	IL33	O95760	270 aa		4.89	□□□□□ -1.63
SFPQ-210	ENST00000490668	ZBED1	O96006	694 aa		4.89	□□□□□ -1.63
SFPQ-210	ENST00000490668	SOD2	P04179	222 aa		4.89	□□□□□ -1.63
SFPQ-210	ENST00000490668	GSTP1	P09211	210 aa	Known RBP	4.89	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 38 ms