RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 GCM1Q9NP62 436 aa5.47□□□□□ -1.53
CSTF1-205ENST00000490539 ZCCHC17Q9NP64 241 aaKnown RBP5.47□□□□□ -1.53
CSTF1-205ENST00000490539 HELLSQ9NRZ9 838 aa5.47□□□□□ -1.53
CSTF1-205ENST00000490539 TMOD4Q9NZQ9 345 aa5.47□□□□□ -1.53
CSTF1-205ENST00000490539 ARPP21Q9UBL0 812 aaPredicted RBP5.47□□□□□ -1.53
CSTF1-205ENST00000490539 ZHX2Q9Y6X8 837 aa5.47□□□□□ -1.53
CSTF1-205ENST00000490539 TRAV20A0A0B4J274 112 aa5.46□□□□□ -1.54
CSTF1-205ENST00000490539 C22orf46C9J442 243 aa5.46□□□□□ -1.54
CSTF1-205ENST00000490539 C19orf81C9J6K1 198 aa5.46□□□□□ -1.54
CSTF1-205ENST00000490539 GPAA1O43292 621 aa5.46□□□□□ -1.54
CSTF1-205ENST00000490539 BUB1BO60566 1050 aaPredicted RBP5.46□□□□□ -1.54
CSTF1-205ENST00000490539 NTRK1P04629 796 aa5.46□□□□□ -1.54
CSTF1-205ENST00000490539 CDR1P51861 262 aa5.46□□□□□ -1.54
CSTF1-205ENST00000490539 USP14P54578 494 aa5.46□□□□□ -1.54
CSTF1-205ENST00000490539 IFRD2Q12894 506 aaPredicted RBP5.46□□□□□ -1.54
CSTF1-205ENST00000490539 PKN2Q16513 984 aaKnown RBP5.46□□□□□ -1.54
CSTF1-205ENST00000490539 ABCB5Q2M3G0 1257 aa5.46□□□□□ -1.54
CSTF1-205ENST00000490539 SLC4A8Q2Y0W8 1093 aa5.46□□□□□ -1.54
CSTF1-205ENST00000490539 CNKSR3Q6P9H4 555 aa5.46□□□□□ -1.54
CSTF1-205ENST00000490539 CLEC17AQ6ZS10 378 aa5.46□□□□□ -1.54
CSTF1-205ENST00000490539 CEP68Q76N32 757 aa5.46□□□□□ -1.54
CSTF1-205ENST00000490539 ADGRA1Q86SQ6 560 aa5.46□□□□□ -1.54
CSTF1-205ENST00000490539 ZFPM1Q8IX07 1006 aa5.46□□□□□ -1.54
CSTF1-205ENST00000490539 ZNF444Q8N0Y2 327 aaPredicted RBP5.46□□□□□ -1.54
CSTF1-205ENST00000490539 DEFB123Q8N688 67 aa5.46□□□□□ -1.54
CSTF1-205ENST00000490539 TMEM145Q8NBT3 493 aa5.46□□□□□ -1.54
CSTF1-205ENST00000490539 SMCR8Q8TEV9 937 aaPredicted RBP5.46□□□□□ -1.54
CSTF1-205ENST00000490539 ZNF384Q8TF68 577 aa5.46□□□□□ -1.54
CSTF1-205ENST00000490539 UBE2Q2Q8WVN8 375 aa5.46□□□□□ -1.54
CSTF1-205ENST00000490539 EDC3Q96F86 508 aaKnown RBP5.46□□□□□ -1.54
CSTF1-205ENST00000490539 TSPAN17Q96FV3 270 aa5.46□□□□□ -1.54
CSTF1-205ENST00000490539 CCDC17Q96LX7 622 aa5.46□□□□□ -1.54
CSTF1-205ENST00000490539 PARK7Q99497 189 aaKnown RBP5.46□□□□□ -1.54
CSTF1-205ENST00000490539 RIOK1Q9BRS2 568 aaKnown RBP5.46□□□□□ -1.54
CSTF1-205ENST00000490539 MTA3Q9BTC8 594 aa5.46□□□□□ -1.54
CSTF1-205ENST00000490539 IER2Q9BTL4 223 aa5.46□□□□□ -1.54
CSTF1-205ENST00000490539 IRF2BPLQ9H1B7 796 aa5.46□□□□□ -1.54
CSTF1-205ENST00000490539 GRPEL1Q9HAV7 217 aa5.46□□□□□ -1.54
CSTF1-205ENST00000490539 DDX4Q9NQI0 724 aaKnown RBP5.46□□□□□ -1.54
CSTF1-205ENST00000490539 MTMR10Q9NXD2 777 aa5.46□□□□□ -1.54
CSTF1-205ENST00000490539 RNF186Q9NXI6 227 aa5.46□□□□□ -1.54
CSTF1-205ENST00000490539 ZNF112Q9UJU3 913 aa5.46□□□□□ -1.54
CSTF1-205ENST00000490539 FZD1Q9UP38 647 aa5.46□□□□□ -1.54
CSTF1-205ENST00000490539 PCDHA2Q9Y5H9 948 aa5.46□□□□□ -1.54
CSTF1-205ENST00000490539 MAST2Q6P0Q8 1798 aa5.46□□□□□ -1.54
CSTF1-205ENST00000490539 AKAP11Q9UKA4 1901 aa5.46□□□□□ -1.54
CSTF1-205ENST00000490539 ZNF646O15015 1829 aaPredicted RBP5.46□□□□□ -1.54
CSTF1-205ENST00000490539 RFX7Q2KHR2 1363 aa5.45□□□□□ -1.54
CSTF1-205ENST00000490539 TCRBV5S4A2TA0A5A2 114 aa5.45□□□□□ -1.54
CSTF1-205ENST00000490539 TRIM75PA6NK02 468 aa5.45□□□□□ -1.54
CSTF1-205ENST00000490539 FGFR1P11362 822 aa5.45□□□□□ -1.54
CSTF1-205ENST00000490539 HOXD10P28358 340 aa5.45□□□□□ -1.54
CSTF1-205ENST00000490539 EPHB3P54753 998 aa5.45□□□□□ -1.54
CSTF1-205ENST00000490539 IRX3P78415 501 aaPredicted RBP5.45□□□□□ -1.54
CSTF1-205ENST00000490539 RBL2Q08999 1139 aa5.45□□□□□ -1.54
CSTF1-205ENST00000490539 LSAMPQ13449 338 aa5.45□□□□□ -1.54
CSTF1-205ENST00000490539 TESK1Q15569 626 aa5.45□□□□□ -1.54
CSTF1-205ENST00000490539 SF1Q15637 639 aaKnown RBP5.45□□□□□ -1.54
CSTF1-205ENST00000490539 INF2Q27J81 1249 aa5.45□□□□□ -1.54
CSTF1-205ENST00000490539 MCMDC2Q4G0Z9 681 aa5.45□□□□□ -1.54
CSTF1-205ENST00000490539 NSMFQ6X4W1 530 aa5.45□□□□□ -1.54
CSTF1-205ENST00000490539 GADL1Q6ZQY3 521 aa5.45□□□□□ -1.54
CSTF1-205ENST00000490539 TMEM179Q6ZVK1 233 aa5.45□□□□□ -1.54
CSTF1-205ENST00000490539 TEX2Q8IWB9 1127 aa5.45□□□□□ -1.54
CSTF1-205ENST00000490539 LCORLQ8N3X6 602 aa5.45□□□□□ -1.54
CSTF1-205ENST00000490539 SDR42E1Q8WUS8 393 aa5.45□□□□□ -1.54
CSTF1-205ENST00000490539 SEC14L1Q92503 715 aa5.45□□□□□ -1.54
CSTF1-205ENST00000490539 TNPO1Q92973 898 aaKnown RBP5.45□□□□□ -1.54
CSTF1-205ENST00000490539 DDX11Q96FC9 970 aa5.45□□□□□ -1.54
CSTF1-205ENST00000490539 ERO1AQ96HE7 468 aa5.45□□□□□ -1.54
CSTF1-205ENST00000490539 STRBPQ96SI9 672 aaKnown RBP5.45□□□□□ -1.54
CSTF1-205ENST00000490539 CDC6Q99741 560 aa5.45□□□□□ -1.54
CSTF1-205ENST00000490539 RNF41Q9H4P4 317 aaPredicted RBP5.45□□□□□ -1.54
CSTF1-205ENST00000490539 CTNNA3Q9UI47 895 aa5.45□□□□□ -1.54
CSTF1-205ENST00000490539 PCDHA5Q9Y5H7 936 aa5.45□□□□□ -1.54
CSTF1-205ENST00000490539 BDP1A6H8Y1 2624 aa5.45□□□□□ -1.54
CSTF1-205ENST00000490539 TRANK1O15050 2925 aa5.44□□□□□ -1.54
CSTF1-205ENST00000490539 SSC5DA1L4H1 1573 aa5.44□□□□□ -1.54
CSTF1-205ENST00000490539 H7BY64 318 aa5.44□□□□□ -1.54
CSTF1-205ENST00000490539 PDHXO00330 501 aa5.44□□□□□ -1.54
CSTF1-205ENST00000490539 PRODHO43272 600 aa5.44□□□□□ -1.54
CSTF1-205ENST00000490539 MAFKO60675 156 aa5.44□□□□□ -1.54
CSTF1-205ENST00000490539 PPP1R11O60927 126 aaPredicted RBP5.44□□□□□ -1.54
CSTF1-205ENST00000490539 GH2P01242 217 aa5.44□□□□□ -1.54
CSTF1-205ENST00000490539 PCP11498 1178 aaKnown RBP5.44□□□□□ -1.54
CSTF1-205ENST00000490539 PABPC1P11940 636 aaKnown RBP5.44□□□□□ -1.54
CSTF1-205ENST00000490539 PI3P19957 117 aa5.44□□□□□ -1.54
CSTF1-205ENST00000490539 BCL6P41182 706 aa5.44□□□□□ -1.54
CSTF1-205ENST00000490539 NT5C2P49902 561 aa5.44□□□□□ -1.54
CSTF1-205ENST00000490539 NCKAP1LP55160 1127 aa5.44□□□□□ -1.54
CSTF1-205ENST00000490539 SP3Q02447 781 aa5.44□□□□□ -1.54
CSTF1-205ENST00000490539 SSRP1Q08945 709 aaKnown RBP5.44□□□□□ -1.54
CSTF1-205ENST00000490539 SPP2Q13103 211 aa5.44□□□□□ -1.54
CSTF1-205ENST00000490539 KCTD2Q14681 263 aa5.44□□□□□ -1.54
CSTF1-205ENST00000490539 PRSS53Q2L4Q9 553 aa5.44□□□□□ -1.54
CSTF1-205ENST00000490539 SBK1Q52WX2 424 aa5.44□□□□□ -1.54
CSTF1-205ENST00000490539 SLC35F1Q5T1Q4 408 aa5.44□□□□□ -1.54
CSTF1-205ENST00000490539 CWC27Q6UX04 472 aaKnown RBP5.44□□□□□ -1.54
CSTF1-205ENST00000490539 RSPO2Q6UXX9 243 aaPredicted RBP5.44□□□□□ -1.54
CSTF1-205ENST00000490539 USP53Q70EK8 1073 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms