RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 CEP57Q86XR8 500 aa11.36□□□□□ -0.59
RBM39-236ENST00000490484 PALB2Q86YC2 1186 aa11.36□□□□□ -0.59
RBM39-236ENST00000490484 KCTD17Q8N5Z5 321 aa11.36□□□□□ -0.59
RBM39-236ENST00000490484 LRRC15Q8TF66 581 aa11.36□□□□□ -0.59
RBM39-236ENST00000490484 REEP2Q9BRK0 252 aa11.36□□□□□ -0.59
RBM39-236ENST00000490484 TCHPQ9BT92 498 aa11.36□□□□□ -0.59
RBM39-236ENST00000490484 GOLGA2P5Q9HBQ8 144 aa11.36□□□□□ -0.59
RBM39-236ENST00000490484 PTPRHQ9HD43 1115 aa11.36□□□□□ -0.59
RBM39-236ENST00000490484 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.36□□□□□ -0.59
RBM39-236ENST00000490484 TOPORSQ9NS56 1045 aaPredicted RBP11.36□□□□□ -0.59
RBM39-236ENST00000490484 FOXD4L1Q9NU39 408 aa11.36□□□□□ -0.59
RBM39-236ENST00000490484 KCND2Q9NZV8 630 aa11.36□□□□□ -0.59
RBM39-236ENST00000490484 RBM19Q9Y4C8 960 aaKnown RBP11.36□□□□□ -0.59
RBM39-236ENST00000490484 TMEM221A6NGB7 291 aa11.35□□□□□ -0.59
RBM39-236ENST00000490484 M0R296 226 aa11.35□□□□□ -0.59
RBM39-236ENST00000490484 ABLIM1O14639 778 aa11.35□□□□□ -0.59
RBM39-236ENST00000490484 TGM5O43548 720 aa11.35□□□□□ -0.59
RBM39-236ENST00000490484 RFPL2O75678 378 aa11.35□□□□□ -0.59
RBM39-236ENST00000490484 B3GAT3O94766 335 aa11.35□□□□□ -0.59
RBM39-236ENST00000490484 MAPTP10636 758 aaKnown RBP11.35□□□□□ -0.59
RBM39-236ENST00000490484 MCF2P10911 925 aa11.35□□□□□ -0.59
RBM39-236ENST00000490484 PLCG1P19174 1290 aa11.35□□□□□ -0.59
RBM39-236ENST00000490484 PROZP22891 400 aa11.35□□□□□ -0.59
RBM39-236ENST00000490484 LONP1P36776 959 aaKnown RBP11.35□□□□□ -0.59
RBM39-236ENST00000490484 PLA2G5P39877 138 aa11.35□□□□□ -0.59
RBM39-236ENST00000490484 CLCNKBP51801 687 aa11.35□□□□□ -0.59
RBM39-236ENST00000490484 SMTNP53814 917 aa11.35□□□□□ -0.59
RBM39-236ENST00000490484 CREMQ03060 361 aa11.35□□□□□ -0.59
RBM39-236ENST00000490484 RESTQ13127 1097 aa11.35□□□□□ -0.59
RBM39-236ENST00000490484 MTMR3Q13615 1198 aa11.35□□□□□ -0.59
RBM39-236ENST00000490484 NOLC1Q14978 699 aaKnown RBP eCLIP11.35□□□□□ -0.59
RBM39-236ENST00000490484 PSMD5Q16401 504 aa11.35□□□□□ -0.59
RBM39-236ENST00000490484 C15orf39Q6ZRI6 1047 aa11.35□□□□□ -0.59
RBM39-236ENST00000490484 TMEM161BQ8NDZ6 487 aa11.35□□□□□ -0.59
RBM39-236ENST00000490484 SPIRE2Q8WWL2 714 aa11.35□□□□□ -0.59
RBM39-236ENST00000490484 BICD1Q96G01 975 aa11.35□□□□□ -0.59
RBM39-236ENST00000490484 SNX27Q96L92 541 aa11.35□□□□□ -0.59
RBM39-236ENST00000490484 PPP1R10Q96QC0 940 aaKnown RBP11.35□□□□□ -0.59
RBM39-236ENST00000490484 TTPALQ9BTX7 342 aa11.35□□□□□ -0.59
RBM39-236ENST00000490484 DPP7Q9UHL4 492 aa11.35□□□□□ -0.59
RBM39-236ENST00000490484 CLIC4Q9Y696 253 aa11.35□□□□□ -0.59
RBM39-236ENST00000490484 VWA8A3KMH1 1905 aa11.35□□□□□ -0.59
RBM39-236ENST00000490484 SMIM28A0A1B0GU29 152 aa11.34□□□□□ -0.59
RBM39-236ENST00000490484 CCDC195A0A1B0GUA6 201 aa11.34□□□□□ -0.59
RBM39-236ENST00000490484 K7ELQ4 463 aaPredicted RBP11.34□□□□□ -0.59
RBM39-236ENST00000490484 K7ENM7 598 aa11.34□□□□□ -0.59
RBM39-236ENST00000490484 SLC26A4O43511 780 aa11.34□□□□□ -0.59
RBM39-236ENST00000490484 TOM1L1O75674 476 aa11.34□□□□□ -0.59
RBM39-236ENST00000490484 FAM13AO94988 1023 aa11.34□□□□□ -0.59
RBM39-236ENST00000490484 BRD1O95696 1058 aa11.34□□□□□ -0.59
RBM39-236ENST00000490484 KRT18P05783 430 aaKnown RBP11.34□□□□□ -0.59
RBM39-236ENST00000490484 ASGR2P07307 311 aa11.34□□□□□ -0.59
RBM39-236ENST00000490484 SYT1P21579 422 aa11.34□□□□□ -0.59
RBM39-236ENST00000490484 IGFBP6P24592 240 aaPredicted RBP11.34□□□□□ -0.59
RBM39-236ENST00000490484 MARCKSP29966 332 aaPredicted RBP11.34□□□□□ -0.59
RBM39-236ENST00000490484 SOX4Q06945 474 aaPredicted RBP11.34□□□□□ -0.59
RBM39-236ENST00000490484 SIGLEC14Q08ET2 396 aa11.34□□□□□ -0.59
RBM39-236ENST00000490484 ELAVL2Q12926 359 aaKnown RBP11.34□□□□□ -0.59
RBM39-236ENST00000490484 SEZ6Q53EL9 994 aa11.34□□□□□ -0.59
RBM39-236ENST00000490484 ARSHQ5FYA8 562 aa11.34□□□□□ -0.59
RBM39-236ENST00000490484 SPECC1Q5M775 1068 aa11.34□□□□□ -0.59
RBM39-236ENST00000490484 FAM173BQ6P4H8 233 aa11.34□□□□□ -0.59
RBM39-236ENST00000490484 GPR65Q8IYL9 337 aa11.34□□□□□ -0.59
RBM39-236ENST00000490484 KREMEN2Q8NCW0 462 aa11.34□□□□□ -0.59
RBM39-236ENST00000490484 C3orf58Q8NDZ4 430 aa11.34□□□□□ -0.59
RBM39-236ENST00000490484 CMASQ8NFW8 434 aaPredicted RBP11.34□□□□□ -0.59
RBM39-236ENST00000490484 PIK3R5Q8WYR1 880 aa11.34□□□□□ -0.59
RBM39-236ENST00000490484 RAD54LQ92698 747 aa11.34□□□□□ -0.59
RBM39-236ENST00000490484 FAM122AQ96E09 287 aa11.34□□□□□ -0.59
RBM39-236ENST00000490484 ZBTB45Q96K62 511 aaPredicted RBP11.34□□□□□ -0.59
RBM39-236ENST00000490484 ACAP3Q96P50 834 aa11.34□□□□□ -0.59
RBM39-236ENST00000490484 SMOC2Q9H3U7 446 aa11.34□□□□□ -0.59
RBM39-236ENST00000490484 ZHX3Q9H4I2 956 aa11.34□□□□□ -0.59
RBM39-236ENST00000490484 BLOC1S4Q9NUP1 217 aa11.34□□□□□ -0.59
RBM39-236ENST00000490484 FNIP2Q9P278 1114 aa11.34□□□□□ -0.59
RBM39-236ENST00000490484 LARSQ9P2J5 1176 aaKnown RBP11.34□□□□□ -0.59
RBM39-236ENST00000490484 USTQ9Y2C2 406 aa11.34□□□□□ -0.59
RBM39-236ENST00000490484 ZNF318Q5VUA4 2279 aa11.34□□□□□ -0.59
RBM39-236ENST00000490484 TRIP11Q15643 1979 aa11.34□□□□□ -0.59
RBM39-236ENST00000490484 CITO14578 2027 aa11.33□□□□□ -0.6
RBM39-236ENST00000490484 TMEM189-UBE2V1I3L0A0 370 aa11.33□□□□□ -0.6
RBM39-236ENST00000490484 I3L4J1 428 aa11.33□□□□□ -0.6
RBM39-236ENST00000490484 HNRNPDLO14979 420 aaKnown RBP11.33□□□□□ -0.6
RBM39-236ENST00000490484 MEFVO15553 781 aaPredicted RBP11.33□□□□□ -0.6
RBM39-236ENST00000490484 TBCAO75347 108 aaKnown RBP11.33□□□□□ -0.6
RBM39-236ENST00000490484 MATR3P43243 847 aaKnown RBP eCLIP11.33□□□□□ -0.6
RBM39-236ENST00000490484 NCKAP1LP55160 1127 aa11.33□□□□□ -0.6
RBM39-236ENST00000490484 CEBPZQ03701 1054 aaKnown RBP11.33□□□□□ -0.6
RBM39-236ENST00000490484 MCM6Q14566 821 aa11.33□□□□□ -0.6
RBM39-236ENST00000490484 PTPAQ15257 358 aa11.33□□□□□ -0.6
RBM39-236ENST00000490484 UPP1Q16831 310 aa11.33□□□□□ -0.6
RBM39-236ENST00000490484 ZPBP2Q6X784 338 aa11.33□□□□□ -0.6
RBM39-236ENST00000490484 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.33□□□□□ -0.6
RBM39-236ENST00000490484 OTOP3Q7RTS5 596 aa11.33□□□□□ -0.6
RBM39-236ENST00000490484 ZDHHC14Q8IZN3 488 aa11.33□□□□□ -0.6
RBM39-236ENST00000490484 LNX1Q8TBB1 728 aaPredicted RBP11.33□□□□□ -0.6
RBM39-236ENST00000490484 SMG7Q92540 1137 aaKnown RBP11.33□□□□□ -0.6
RBM39-236ENST00000490484 PBXIP1Q96AQ6 731 aa11.33□□□□□ -0.6
RBM39-236ENST00000490484 ZNF707Q96C28 371 aaPredicted RBP11.33□□□□□ -0.6
RBM39-236ENST00000490484 INTS4Q96HW7 963 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms