RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 SRSF3P84103 164 aaKnown RBP6.1□□□□□ -1.43
SSX2IP-208ENST00000490476 HDAC1Q13547 482 aaPredicted RBP6.1□□□□□ -1.43
SSX2IP-208ENST00000490476 ZSWIM9Q86XI8 627 aa6.1□□□□□ -1.43
SSX2IP-208ENST00000490476 IRF2BP1Q8IU81 584 aa6.1□□□□□ -1.43
SSX2IP-208ENST00000490476 GAB3Q8WWW8 586 aa6.1□□□□□ -1.43
SSX2IP-208ENST00000490476 RPS6KC1Q96S38 1066 aa6.1□□□□□ -1.43
SSX2IP-208ENST00000490476 CHST12Q9NRB3 414 aa6.1□□□□□ -1.43
SSX2IP-208ENST00000490476 FTSJ1Q9UET6 329 aa6.1□□□□□ -1.43
SSX2IP-208ENST00000490476 SPTBN4Q9H254 2564 aa6.1□□□□□ -1.43
SSX2IP-208ENST00000490476 FER1L6Q2WGJ9 1857 aa6.09□□□□□ -1.43
SSX2IP-208ENST00000490476 ANKRD11Q6UB99 2663 aaPredicted RBP6.09□□□□□ -1.43
SSX2IP-208ENST00000490476 POU2F2P09086 479 aa6.09□□□□□ -1.43
SSX2IP-208ENST00000490476 NBPF7P0C2Y1 421 aaPredicted RBP6.09□□□□□ -1.43
SSX2IP-208ENST00000490476 CYP2C8P10632 490 aa6.09□□□□□ -1.43
SSX2IP-208ENST00000490476 NCAM1P13591 858 aa6.09□□□□□ -1.43
SSX2IP-208ENST00000490476 KCNA3P22001 575 aa6.09□□□□□ -1.43
SSX2IP-208ENST00000490476 SLC16A1P53985 500 aa6.09□□□□□ -1.43
SSX2IP-208ENST00000490476 CACNB2Q08289 660 aaPredicted RBP6.09□□□□□ -1.43
SSX2IP-208ENST00000490476 BRD3Q15059 726 aa6.09□□□□□ -1.43
SSX2IP-208ENST00000490476 LILRA6Q6PI73 481 aa6.09□□□□□ -1.43
SSX2IP-208ENST00000490476 ATG4DQ86TL0 474 aaPredicted RBP6.09□□□□□ -1.43
SSX2IP-208ENST00000490476 CAMKK1Q8N5S9 505 aa6.09□□□□□ -1.43
SSX2IP-208ENST00000490476 STPG3Q8N7X2 389 aa6.09□□□□□ -1.43
SSX2IP-208ENST00000490476 COA7Q96BR5 231 aa6.09□□□□□ -1.43
SSX2IP-208ENST00000490476 RUNDC1Q96C34 613 aa6.09□□□□□ -1.43
SSX2IP-208ENST00000490476 TAAR9Q96RI9 348 aa6.09□□□□□ -1.43
SSX2IP-208ENST00000490476 MAP3K14Q99558 947 aa6.09□□□□□ -1.43
SSX2IP-208ENST00000490476 KRTAP4-12Q9BQ66 201 aa6.09□□□□□ -1.43
SSX2IP-208ENST00000490476 BTBD2Q9BX70 525 aa6.09□□□□□ -1.43
SSX2IP-208ENST00000490476 RNF38Q9H0F5 515 aa6.09□□□□□ -1.43
SSX2IP-208ENST00000490476 OR10A5Q9H207 317 aa6.09□□□□□ -1.43
SSX2IP-208ENST00000490476 DDX21Q9NR30 783 aaKnown RBP eCLIP6.09□□□□□ -1.43
SSX2IP-208ENST00000490476 SIRT5Q9NXA8 310 aa6.09□□□□□ -1.43
SSX2IP-208ENST00000490476 SAGE1Q9NXZ1 904 aa6.09□□□□□ -1.43
SSX2IP-208ENST00000490476 HSPBP1Q9NZL4 362 aa6.09□□□□□ -1.43
SSX2IP-208ENST00000490476 ZFP69BQ9UJL9 534 aa6.09□□□□□ -1.43
SSX2IP-208ENST00000490476 DENND2AQ9ULE3 1009 aa6.09□□□□□ -1.43
SSX2IP-208ENST00000490476 PCDHB6Q9Y5E3 794 aa6.09□□□□□ -1.43
SSX2IP-208ENST00000490476 CDY2AQ9Y6F7 541 aa6.09□□□□□ -1.43
SSX2IP-208ENST00000490476 MAFGO15525 162 aa6.08□□□□□ -1.44
SSX2IP-208ENST00000490476 OPHN1O60890 802 aa6.08□□□□□ -1.44
SSX2IP-208ENST00000490476 MMP10P09238 476 aa6.08□□□□□ -1.44
SSX2IP-208ENST00000490476 PDCP20941 246 aa6.08□□□□□ -1.44
SSX2IP-208ENST00000490476 XPAP23025 273 aaPredicted RBP6.08□□□□□ -1.44
SSX2IP-208ENST00000490476 ADCY8P40145 1251 aa6.08□□□□□ -1.44
SSX2IP-208ENST00000490476 IL13RA1P78552 427 aa6.08□□□□□ -1.44
SSX2IP-208ENST00000490476 CD83Q01151 205 aa6.08□□□□□ -1.44
SSX2IP-208ENST00000490476 OS9Q13438 667 aaPredicted RBP6.08□□□□□ -1.44
SSX2IP-208ENST00000490476 GBX1Q14549 363 aa6.08□□□□□ -1.44
SSX2IP-208ENST00000490476 KCTD2Q14681 263 aa6.08□□□□□ -1.44
SSX2IP-208ENST00000490476 LLGL1Q15334 1064 aa6.08□□□□□ -1.44
SSX2IP-208ENST00000490476 WDR72Q3MJ13 1102 aa6.08□□□□□ -1.44
SSX2IP-208ENST00000490476 COBLL1Q53SF7 1204 aa6.08□□□□□ -1.44
SSX2IP-208ENST00000490476 MCTP1Q6DN14 999 aa6.08□□□□□ -1.44
SSX2IP-208ENST00000490476 IL31Q6EBC2 164 aa6.08□□□□□ -1.44
SSX2IP-208ENST00000490476 TMEM132EQ6IEE7 984 aa6.08□□□□□ -1.44
SSX2IP-208ENST00000490476 B3GNT9Q6UX72 402 aa6.08□□□□□ -1.44
SSX2IP-208ENST00000490476 GAREM2Q75VX8 874 aa6.08□□□□□ -1.44
SSX2IP-208ENST00000490476 Q7L0L9 218 aa6.08□□□□□ -1.44
SSX2IP-208ENST00000490476 CNTROBQ8N137 903 aa6.08□□□□□ -1.44
SSX2IP-208ENST00000490476 CDYL2Q8N8U2 506 aa6.08□□□□□ -1.44
SSX2IP-208ENST00000490476 DTX3Q8N9I9 347 aa6.08□□□□□ -1.44
SSX2IP-208ENST00000490476 ZBTB34Q8NCN2 500 aa6.08□□□□□ -1.44
SSX2IP-208ENST00000490476 SMARCC2Q8TAQ2 1214 aa6.08□□□□□ -1.44
SSX2IP-208ENST00000490476 NRG4Q8WWG1 115 aa6.08□□□□□ -1.44
SSX2IP-208ENST00000490476 HPS3Q969F9 1004 aa6.08□□□□□ -1.44
SSX2IP-208ENST00000490476 LIN37Q96GY3 246 aaPredicted RBP6.08□□□□□ -1.44
SSX2IP-208ENST00000490476 DIRC2Q96SL1 478 aa6.08□□□□□ -1.44
SSX2IP-208ENST00000490476 ACO2Q99798 780 aaKnown RBP6.08□□□□□ -1.44
SSX2IP-208ENST00000490476 PRO3102Q9H379 93 aa6.08□□□□□ -1.44
SSX2IP-208ENST00000490476 TAF1DQ9H5J8 278 aaPredicted RBP6.08□□□□□ -1.44
SSX2IP-208ENST00000490476 ZNF552Q9H707 407 aaPredicted RBP6.08□□□□□ -1.44
SSX2IP-208ENST00000490476 DMRT3Q9NQL9 472 aa6.08□□□□□ -1.44
SSX2IP-208ENST00000490476 DLL4Q9NR61 685 aa6.08□□□□□ -1.44
SSX2IP-208ENST00000490476 C1orf112Q9NSG2 853 aa6.08□□□□□ -1.44
SSX2IP-208ENST00000490476 EVLQ9UI08 416 aaPredicted RBP6.08□□□□□ -1.44
SSX2IP-208ENST00000490476 CROTQ9UKG9 612 aa6.08□□□□□ -1.44
SSX2IP-208ENST00000490476 INTUQ9ULD6 942 aa6.08□□□□□ -1.44
SSX2IP-208ENST00000490476 KMT2BQ9UMN6 2715 aaPredicted RBP6.08□□□□□ -1.44
SSX2IP-208ENST00000490476 TRANK1O15050 2925 aa6.08□□□□□ -1.44
SSX2IP-208ENST00000490476 PPIP5K1Q6PFW1 1433 aa6.08□□□□□ -1.44
SSX2IP-208ENST00000490476 NSD3Q9BZ95 1437 aa6.08□□□□□ -1.44
SSX2IP-208ENST00000490476 WDR17Q8IZU2 1322 aa6.07□□□□□ -1.44
SSX2IP-208ENST00000490476 A0A1W2PPC1 479 aa6.07□□□□□ -1.44
SSX2IP-208ENST00000490476 CCDC154A6NI56 674 aa6.07□□□□□ -1.44
SSX2IP-208ENST00000490476 BIN1O00499 593 aa6.07□□□□□ -1.44
SSX2IP-208ENST00000490476 IL18BPO95998 194 aa6.07□□□□□ -1.44
SSX2IP-208ENST00000490476 ATF2P15336 505 aa6.07□□□□□ -1.44
SSX2IP-208ENST00000490476 NFATC3Q12968 1075 aa6.07□□□□□ -1.44
SSX2IP-208ENST00000490476 USP45Q70EL2 814 aa6.07□□□□□ -1.44
SSX2IP-208ENST00000490476 SLC41A1Q8IVJ1 513 aa6.07□□□□□ -1.44
SSX2IP-208ENST00000490476 PPP1R35Q8TAP8 253 aa6.07□□□□□ -1.44
SSX2IP-208ENST00000490476 RSAD2Q8WXG1 361 aa6.07□□□□□ -1.44
SSX2IP-208ENST00000490476 CPA5Q8WXQ8 436 aa6.07□□□□□ -1.44
SSX2IP-208ENST00000490476 DPF2Q92785 391 aa6.07□□□□□ -1.44
SSX2IP-208ENST00000490476 FATE1Q969F0 183 aa6.07□□□□□ -1.44
SSX2IP-208ENST00000490476 MVB12AQ96EY5 273 aa6.07□□□□□ -1.44
SSX2IP-208ENST00000490476 HIST1H2AHQ96KK5 128 aa6.07□□□□□ -1.44
SSX2IP-208ENST00000490476 TMEM209Q96SK2 561 aa6.07□□□□□ -1.44
SSX2IP-208ENST00000490476 HIST1H2AJQ99878 128 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms