RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 K7ENM7 598 aa21.64■■□□□ 1.05
SMC4-222ENST00000490207 TBCAO75347 108 aaKnown RBP21.64■■□□□ 1.05
SMC4-222ENST00000490207 TOM1L1O75674 476 aa21.64■■□□□ 1.05
SMC4-222ENST00000490207 KIF4AO95239 1232 aa21.64■■□□□ 1.05
SMC4-222ENST00000490207 BRD1O95696 1058 aa21.64■■□□□ 1.05
SMC4-222ENST00000490207 ADH1AP07327 375 aa21.64■■□□□ 1.05
SMC4-222ENST00000490207 ZNF131P52739 623 aa21.64■■□□□ 1.05
SMC4-222ENST00000490207 ITIH3Q06033 890 aa21.64■■□□□ 1.05
SMC4-222ENST00000490207 NOLC1Q14978 699 aaKnown RBP eCLIP21.64■■□□□ 1.05
SMC4-222ENST00000490207 KIAA0319Q5VV43 1072 aa21.64■■□□□ 1.05
SMC4-222ENST00000490207 MYCT1Q8N699 235 aa21.64■■□□□ 1.05
SMC4-222ENST00000490207 BICD1Q96G01 975 aa21.64■■□□□ 1.05
SMC4-222ENST00000490207 ZBTB45Q96K62 511 aaPredicted RBP21.64■■□□□ 1.05
SMC4-222ENST00000490207 B3GALT6Q96L58 329 aa21.64■■□□□ 1.05
SMC4-222ENST00000490207 PPP1R10Q96QC0 940 aaKnown RBP21.64■■□□□ 1.05
SMC4-222ENST00000490207 ADAM7Q9H2U9 754 aa21.64■■□□□ 1.05
SMC4-222ENST00000490207 CHST7Q9NS84 486 aa21.64■■□□□ 1.05
SMC4-222ENST00000490207 STK17AQ9UEE5 414 aa21.64■■□□□ 1.05
SMC4-222ENST00000490207 CDH22Q9UJ99 828 aa21.64■■□□□ 1.05
SMC4-222ENST00000490207 C2orf16Q68DN1 1984 aa21.63■■□□□ 1.05
SMC4-222ENST00000490207 TEX28O15482 410 aa21.63■■□□□ 1.05
SMC4-222ENST00000490207 DCXO43602 365 aa21.63■■□□□ 1.05
SMC4-222ENST00000490207 ALADP13716 330 aa21.63■■□□□ 1.05
SMC4-222ENST00000490207 NASPP49321 788 aaPredicted RBP21.63■■□□□ 1.05
SMC4-222ENST00000490207 SLC39A14Q15043 492 aa21.63■■□□□ 1.05
SMC4-222ENST00000490207 ZPBP2Q6X784 338 aa21.63■■□□□ 1.05
SMC4-222ENST00000490207 HAUS6Q7Z4H7 955 aa21.63■■□□□ 1.05
SMC4-222ENST00000490207 C12orf76Q8N812 135 aaPredicted RBP21.63■■□□□ 1.05
SMC4-222ENST00000490207 KRI1Q8N9T8 703 aaKnown RBP21.63■■□□□ 1.05
SMC4-222ENST00000490207 RPGRIP1Q96KN7 1286 aa21.63■■□□□ 1.05
SMC4-222ENST00000490207 SNX27Q96L92 541 aa21.63■■□□□ 1.05
SMC4-222ENST00000490207 FBXL18Q96ME1 805 aa21.63■■□□□ 1.05
SMC4-222ENST00000490207 NECTIN4Q96NY8 510 aa21.63■■□□□ 1.05
SMC4-222ENST00000490207 ACAP3Q96P50 834 aa21.63■■□□□ 1.05
SMC4-222ENST00000490207 ZHX3Q9H4I2 956 aa21.63■■□□□ 1.05
SMC4-222ENST00000490207 SFXN1Q9H9B4 322 aa21.63■■□□□ 1.05
SMC4-222ENST00000490207 RXFP1Q9HBX9 757 aa21.63■■□□□ 1.05
SMC4-222ENST00000490207 DDIT3P35638 169 aa21.62■■□□□ 1.05
SMC4-222ENST00000490207 MTHFRP42898 656 aa21.62■■□□□ 1.05
SMC4-222ENST00000490207 MATR3P43243 847 aaKnown RBP eCLIP21.62■■□□□ 1.057e-8■■□□□ 11.8
SMC4-222ENST00000490207 STK38Q15208 465 aa21.62■■□□□ 1.05
SMC4-222ENST00000490207 RNF135Q8IUD6 432 aa21.62■■□□□ 1.05
SMC4-222ENST00000490207 RIN2Q8WYP3 895 aaPredicted RBP21.62■■□□□ 1.05
SMC4-222ENST00000490207 KCNN1Q92952 543 aa21.62■■□□□ 1.05
SMC4-222ENST00000490207 RIPOR3Q96MK2 946 aa21.62■■□□□ 1.05
SMC4-222ENST00000490207 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.62■■□□□ 1.05
SMC4-222ENST00000490207 MTCL1Q9Y4B5 1905 aaKnown RBP21.62■■□□□ 1.05
SMC4-222ENST00000490207 SMIM28A0A1B0GU29 152 aa21.61■■□□□ 1.05
SMC4-222ENST00000490207 TRAK2O60296 914 aa21.61■■□□□ 1.05
SMC4-222ENST00000490207 GLUD1P00367 558 aa21.61■■□□□ 1.05
SMC4-222ENST00000490207 WEE2P0C1S8 567 aa21.61■■□□□ 1.05
SMC4-222ENST00000490207 SCP2P22307 547 aa21.61■■□□□ 1.05
SMC4-222ENST00000490207 CREMQ03060 361 aa21.61■■□□□ 1.05
SMC4-222ENST00000490207 ELAVL2Q12926 359 aaKnown RBP21.61■■□□□ 1.05
SMC4-222ENST00000490207 XKR4Q5GH76 650 aa21.61■■□□□ 1.05
SMC4-222ENST00000490207 TMEM31Q5JXX7 168 aa21.61■■□□□ 1.05
SMC4-222ENST00000490207 RRAGBQ5VZM2 374 aa21.61■■□□□ 1.05
SMC4-222ENST00000490207 GPR65Q8IYL9 337 aa21.61■■□□□ 1.05
SMC4-222ENST00000490207 UROC1Q96N76 676 aa21.61■■□□□ 1.05
SMC4-222ENST00000490207 ZNF396Q96N95 335 aaPredicted RBP21.61■■□□□ 1.05
SMC4-222ENST00000490207 POMKQ9H5K3 350 aa21.61■■□□□ 1.05
SMC4-222ENST00000490207 GOLGA2P5Q9HBQ8 144 aa21.61■■□□□ 1.05
SMC4-222ENST00000490207 MAN1C1Q9NR34 630 aa21.61■■□□□ 1.05
SMC4-222ENST00000490207 MUTYHQ9UIF7 546 aa21.61■■□□□ 1.05
SMC4-222ENST00000490207 FAM86C2PA6NEL3 165 aa21.6■■□□□ 1.05
SMC4-222ENST00000490207 TMEM189-UBE2V1I3L0A0 370 aa21.6■■□□□ 1.05
SMC4-222ENST00000490207 CLDN3O15551 220 aa21.6■■□□□ 1.05
SMC4-222ENST00000490207 LIG4P49917 911 aa21.6■■□□□ 1.05
SMC4-222ENST00000490207 CLCNKBP51801 687 aa21.6■■□□□ 1.05
SMC4-222ENST00000490207 MCL1Q07820 350 aa21.6■■□□□ 1.05
SMC4-222ENST00000490207 RTP2Q5QGT7 225 aa21.6■■□□□ 1.05
SMC4-222ENST00000490207 FAM171A1Q5VUB5 890 aa21.6■■□□□ 1.05
SMC4-222ENST00000490207 FOXD4L5Q5VV16 416 aaPredicted RBP21.6■■□□□ 1.05
SMC4-222ENST00000490207 KANK3Q6NY19 840 aa21.6■■□□□ 1.05
SMC4-222ENST00000490207 ALKAL1Q6UXT8 129 aa21.6■■□□□ 1.05
SMC4-222ENST00000490207 FOXD4L4Q8WXT5 416 aaPredicted RBP21.6■■□□□ 1.05
SMC4-222ENST00000490207 C11orf16Q9NQ32 467 aa21.6■■□□□ 1.05
SMC4-222ENST00000490207 SLC38A7Q9NVC3 462 aa21.6■■□□□ 1.05
SMC4-222ENST00000490207 CNTN3Q9P232 1028 aa21.6■■□□□ 1.05
SMC4-222ENST00000490207 FNIP2Q9P278 1114 aa21.6■■□□□ 1.05
SMC4-222ENST00000490207 TBX20Q9UMR3 447 aa21.6■■□□□ 1.05
SMC4-222ENST00000490207 HNRNPDLO14979 420 aaKnown RBP21.59■■□□□ 1.05
SMC4-222ENST00000490207 SP100P23497 879 aaPredicted RBP21.59■■□□□ 1.05
SMC4-222ENST00000490207 STAT6P42226 847 aa21.59■■□□□ 1.05
SMC4-222ENST00000490207 SEZ6Q53EL9 994 aa21.59■■□□□ 1.05
SMC4-222ENST00000490207 ELMSAN1Q6PJG2 1045 aa21.59■■□□□ 1.05
SMC4-222ENST00000490207 PRSS55Q6UWB4 352 aaPredicted RBP21.59■■□□□ 1.05
SMC4-222ENST00000490207 TMC5Q6UXY8 1006 aa21.59■■□□□ 1.05
SMC4-222ENST00000490207 CCDC73Q6ZRK6 1079 aa21.59■■□□□ 1.05
SMC4-222ENST00000490207 DYMQ7RTS9 669 aa21.59■■□□□ 1.05
SMC4-222ENST00000490207 GLYCTKQ8IVS8 523 aa21.59■■□□□ 1.05
SMC4-222ENST00000490207 LINC00301Q8NCQ3 95 aa21.59■■□□□ 1.05
SMC4-222ENST00000490207 FIZ1Q96SL8 496 aa21.59■■□□□ 1.05
SMC4-222ENST00000490207 TTPALQ9BTX7 342 aa21.59■■□□□ 1.05
SMC4-222ENST00000490207 TSHZ2Q9NRE2 1034 aa21.59■■□□□ 1.05
SMC4-222ENST00000490207 NR2E1Q9Y466 385 aa21.59■■□□□ 1.05
SMC4-222ENST00000490207 SPTLC2O15270 562 aa21.58■■□□□ 1.05
SMC4-222ENST00000490207 GPR37L1O60883 481 aa21.58■■□□□ 1.05
SMC4-222ENST00000490207 PIGRP01833 764 aa21.58■■□□□ 1.05
SMC4-222ENST00000490207 ZSCAN22P10073 491 aaPredicted RBP21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms