RNA–Protein interactions for RNA: ENST00000489629.1

CPSF3-205, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 3

Gene CPSF3, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-205ENST00000489629 ALG13Q9NP73 1137 aaKnown RBP4.37□□□□□ -1.71
CPSF3-205ENST00000489629 ZNHIT2Q9UHR6 403 aa4.37□□□□□ -1.71
CPSF3-205ENST00000489629 FPGT-TNNI3KV9GXZ4 949 aa4.37□□□□□ -1.71
CPSF3-205ENST00000489629 ZAR1LA6NP61 321 aa4.36□□□□□ -1.71
CPSF3-205ENST00000489629 SPDEFO95238 335 aa4.36□□□□□ -1.71
CPSF3-205ENST00000489629 GUCY1A2P33402 732 aa4.36□□□□□ -1.71
CPSF3-205ENST00000489629 SOX5P35711 763 aa4.36□□□□□ -1.71
CPSF3-205ENST00000489629 GPR3P46089 330 aa4.36□□□□□ -1.71
CPSF3-205ENST00000489629 SEC24CP53992 1094 aa4.36□□□□□ -1.71
CPSF3-205ENST00000489629 KRTAP1-1Q07627 177 aa4.36□□□□□ -1.71
CPSF3-205ENST00000489629 RESTQ13127 1097 aa4.36□□□□□ -1.71
CPSF3-205ENST00000489629 STAT4Q14765 748 aa4.36□□□□□ -1.71
CPSF3-205ENST00000489629 ANO4Q32M45 955 aa4.36□□□□□ -1.71
CPSF3-205ENST00000489629 ABHD17BQ5VST6 288 aa4.36□□□□□ -1.71
CPSF3-205ENST00000489629 LHFPL2Q6ZUX7 228 aa4.36□□□□□ -1.71
CPSF3-205ENST00000489629 CMTR2Q8IYT2 770 aaKnown RBP4.36□□□□□ -1.71
CPSF3-205ENST00000489629 LCORLQ8N3X6 602 aa4.36□□□□□ -1.71
CPSF3-205ENST00000489629 SUPT20HQ8NEM7 779 aa4.36□□□□□ -1.71
CPSF3-205ENST00000489629 FBXO18Q8NFZ0 1043 aa4.36□□□□□ -1.71
CPSF3-205ENST00000489629 BBC3Q96PG8 261 aaPredicted RBP4.36□□□□□ -1.71
CPSF3-205ENST00000489629 RIOX1Q9H6W3 641 aa4.36□□□□□ -1.71
CPSF3-205ENST00000489629 RBM12Q9NTZ6 932 aaKnown RBP4.36□□□□□ -1.71
CPSF3-205ENST00000489629 KLHL11Q9NVR0 708 aa4.36□□□□□ -1.71
CPSF3-205ENST00000489629 FAM30AQ9NZY2 134 aa4.36□□□□□ -1.71
CPSF3-205ENST00000489629 HLA-DOAP06340 250 aa4.35□□□□□ -1.71
CPSF3-205ENST00000489629 HKR1P10072 659 aa4.35□□□□□ -1.71
CPSF3-205ENST00000489629 MTHFD2P13995 350 aa4.35□□□□□ -1.71
CPSF3-205ENST00000489629 HSD3B2P26439 372 aa4.35□□□□□ -1.71
CPSF3-205ENST00000489629 ECHS1P30084 290 aa4.35□□□□□ -1.71
CPSF3-205ENST00000489629 AVPR1BP47901 424 aa4.35□□□□□ -1.71
CPSF3-205ENST00000489629 SRSF2Q01130 221 aaKnown RBP4.35□□□□□ -1.71
CPSF3-205ENST00000489629 MUM1L1Q5H9M0 696 aa4.35□□□□□ -1.71
CPSF3-205ENST00000489629 TOR2AQ5JU69 321 aa4.35□□□□□ -1.71
CPSF3-205ENST00000489629 GJC2Q5T442 439 aaPredicted RBP4.35□□□□□ -1.71
CPSF3-205ENST00000489629 AFMIDQ63HM1 303 aa4.35□□□□□ -1.71
CPSF3-205ENST00000489629 B3GNTL1Q67FW5 361 aaPredicted RBP4.35□□□□□ -1.71
CPSF3-205ENST00000489629 ARMC6Q6NXE6 501 aa4.35□□□□□ -1.71
CPSF3-205ENST00000489629 GIMAP6Q6P9H5 292 aa4.35□□□□□ -1.71
CPSF3-205ENST00000489629 OR56A1Q8NGH5 318 aa4.35□□□□□ -1.71
CPSF3-205ENST00000489629 CHAC2Q8WUX2 184 aa4.35□□□□□ -1.71
CPSF3-205ENST00000489629 FUBP1Q96AE4 644 aaKnown RBP4.35□□□□□ -1.71
CPSF3-205ENST00000489629 ZNF764Q96H86 408 aaPredicted RBP4.35□□□□□ -1.71
CPSF3-205ENST00000489629 MRI1Q9BV20 369 aa4.35□□□□□ -1.71
CPSF3-205ENST00000489629 ACE2Q9BYF1 805 aaPredicted RBP4.35□□□□□ -1.71
CPSF3-205ENST00000489629 ATP11BQ9Y2G3 1177 aa4.35□□□□□ -1.71
CPSF3-205ENST00000489629 SIK3Q9Y2K2 1263 aa4.35□□□□□ -1.71
CPSF3-205ENST00000489629 CCDC78A2IDD5 438 aa4.34□□□□□ -1.71
CPSF3-205ENST00000489629 KIAA0355O15063 1070 aa4.34□□□□□ -1.71
CPSF3-205ENST00000489629 PRKD3O94806 890 aa4.34□□□□□ -1.71
CPSF3-205ENST00000489629 IL2RBP14784 551 aa4.34□□□□□ -1.71
CPSF3-205ENST00000489629 MPLP40238 635 aa4.34□□□□□ -1.71
CPSF3-205ENST00000489629 MCAMP43121 646 aa4.34□□□□□ -1.71
CPSF3-205ENST00000489629 MTNR1BP49286 362 aa4.34□□□□□ -1.71
CPSF3-205ENST00000489629 SCAND1P57086 179 aa4.34□□□□□ -1.71
CPSF3-205ENST00000489629 RAP2BP61225 183 aa4.34□□□□□ -1.71
CPSF3-205ENST00000489629 BLOC1S1P78537 153 aa4.34□□□□□ -1.71
CPSF3-205ENST00000489629 FAPQ12884 760 aa4.34□□□□□ -1.71
CPSF3-205ENST00000489629 PRR16Q569H4 304 aa4.34□□□□□ -1.71
CPSF3-205ENST00000489629 RRP12Q5JTH9 1297 aaKnown RBP4.34□□□□□ -1.71
CPSF3-205ENST00000489629 OTUD7BQ6GQQ9 843 aa4.34□□□□□ -1.71
CPSF3-205ENST00000489629 SDE2Q6IQ49 451 aa4.34□□□□□ -1.71
CPSF3-205ENST00000489629 MED25Q71SY5 747 aa4.34□□□□□ -1.71
CPSF3-205ENST00000489629 MAPKAPK5Q8IW41 473 aa4.34□□□□□ -1.71
CPSF3-205ENST00000489629 DRC7Q8IY82 874 aa4.34□□□□□ -1.71
CPSF3-205ENST00000489629 PQLC1Q8N2U9 271 aa4.34□□□□□ -1.71
CPSF3-205ENST00000489629 TMEM132CQ8N3T6 1108 aa4.34□□□□□ -1.71
CPSF3-205ENST00000489629 VOPP1Q96AW1 172 aa4.34□□□□□ -1.71
CPSF3-205ENST00000489629 KRTAP9-8Q9BYQ0 159 aa4.34□□□□□ -1.71
CPSF3-205ENST00000489629 DMRT3Q9NQL9 472 aa4.34□□□□□ -1.71
CPSF3-205ENST00000489629 TMEM74BQ9NUR3 256 aa4.34□□□□□ -1.71
CPSF3-205ENST00000489629 C14orf119Q9NWQ9 140 aa4.34□□□□□ -1.71
CPSF3-205ENST00000489629 COL11A2P13942 1736 aaPredicted RBP4.34□□□□□ -1.71
CPSF3-205ENST00000489629 CDKL5O76039 1030 aa4.33□□□□□ -1.72
CPSF3-205ENST00000489629 PRSS23O95084 383 aa4.33□□□□□ -1.72
CPSF3-205ENST00000489629 VIL1P09327 827 aaKnown RBP4.33□□□□□ -1.72
CPSF3-205ENST00000489629 FPR1P21462 350 aa4.33□□□□□ -1.72
CPSF3-205ENST00000489629 GCSHP23434 173 aa4.33□□□□□ -1.72
CPSF3-205ENST00000489629 SLC6A9P48067 706 aa4.33□□□□□ -1.72
CPSF3-205ENST00000489629 TMPRSS15P98073 1019 aa4.33□□□□□ -1.72
CPSF3-205ENST00000489629 OCA2Q04671 838 aa4.33□□□□□ -1.72
CPSF3-205ENST00000489629 MALLQ13021 153 aa4.33□□□□□ -1.72
CPSF3-205ENST00000489629 UBXN2BQ14CS0 331 aa4.33□□□□□ -1.72
CPSF3-205ENST00000489629 SEPT2Q15019 361 aa4.33□□□□□ -1.72
CPSF3-205ENST00000489629 CCDC142Q17RM4 750 aa4.33□□□□□ -1.72
CPSF3-205ENST00000489629 TSHZ3Q63HK5 1081 aa4.33□□□□□ -1.72
CPSF3-205ENST00000489629 FAM180AQ6UWF9 173 aa4.33□□□□□ -1.72
CPSF3-205ENST00000489629 KRT26Q7Z3Y9 468 aa4.33□□□□□ -1.72
CPSF3-205ENST00000489629 GPR149Q86SP6 731 aa4.33□□□□□ -1.72
CPSF3-205ENST00000489629 ADGRG3Q86Y34 549 aa4.33□□□□□ -1.72
CPSF3-205ENST00000489629 CASKIN2Q8WXE0 1202 aa4.33□□□□□ -1.72
CPSF3-205ENST00000489629 STON2Q8WXE9 905 aa4.33□□□□□ -1.72
CPSF3-205ENST00000489629 CAVIN3Q969G5 261 aa4.33□□□□□ -1.72
CPSF3-205ENST00000489629 FUBP3Q96I24 572 aaKnown RBP eCLIP4.33□□□□□ -1.72
CPSF3-205ENST00000489629 PHACTR3Q96KR7 559 aa4.33□□□□□ -1.72
CPSF3-205ENST00000489629 UHRF1Q96T88 793 aaPredicted RBP4.33□□□□□ -1.72
CPSF3-205ENST00000489629 SLKQ9H2G2 1235 aaPredicted RBP4.33□□□□□ -1.72
CPSF3-205ENST00000489629 LANCL2Q9NS86 450 aa4.33□□□□□ -1.72
CPSF3-205ENST00000489629 CCM2LQ9NUG4 571 aaPredicted RBP4.33□□□□□ -1.72
CPSF3-205ENST00000489629 MOCS1Q9NZB8 636 aa4.33□□□□□ -1.72
CPSF3-205ENST00000489629 SLC23A1Q9UHI7 598 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms