RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 LRRC15Q8TF66 581 aa13.78□□□□□ -0.2
SRRM1-216ENST00000489130 HASPINQ8TF76 798 aa13.78□□□□□ -0.2
SRRM1-216ENST00000489130 HDAC7Q8WUI4 952 aa13.78□□□□□ -0.2
SRRM1-216ENST00000489130 RIN2Q8WYP3 895 aaPredicted RBP13.78□□□□□ -0.2
SRRM1-216ENST00000489130 KCNN1Q92952 543 aa13.78□□□□□ -0.2
SRRM1-216ENST00000489130 TARS2Q9BW92 718 aaKnown RBP13.78□□□□□ -0.2
SRRM1-216ENST00000489130 VPS37CA5D8V6 355 aaPredicted RBP13.77□□□□□ -0.21
SRRM1-216ENST00000489130 TMEM221A6NGB7 291 aa13.77□□□□□ -0.21
SRRM1-216ENST00000489130 M0R296 226 aa13.77□□□□□ -0.21
SRRM1-216ENST00000489130 TGM5O43548 720 aa13.77□□□□□ -0.21
SRRM1-216ENST00000489130 MAPTP10636 758 aaKnown RBP13.77□□□□□ -0.21
SRRM1-216ENST00000489130 MCF2P10911 925 aa13.77□□□□□ -0.21
SRRM1-216ENST00000489130 SMTNP53814 917 aa13.77□□□□□ -0.21
SRRM1-216ENST00000489130 YARSP54577 528 aaKnown RBP13.77□□□□□ -0.21
SRRM1-216ENST00000489130 GRIN1Q05586 938 aa13.77□□□□□ -0.21
SRRM1-216ENST00000489130 SIGLEC14Q08ET2 396 aa13.77□□□□□ -0.21
SRRM1-216ENST00000489130 ELAVL2Q12926 359 aaKnown RBP13.77□□□□□ -0.21
SRRM1-216ENST00000489130 GLRA4Q5JXX5 417 aa13.77□□□□□ -0.21
SRRM1-216ENST00000489130 RTP2Q5QGT7 225 aa13.77□□□□□ -0.21
SRRM1-216ENST00000489130 LILRA6Q6PI73 481 aa13.77□□□□□ -0.21
SRRM1-216ENST00000489130 MPZL3Q6UWV2 235 aa13.77□□□□□ -0.21
SRRM1-216ENST00000489130 ALKAL1Q6UXT8 129 aa13.77□□□□□ -0.21
SRRM1-216ENST00000489130 CYP26C1Q6V0L0 522 aa13.77□□□□□ -0.21
SRRM1-216ENST00000489130 DENND4AQ7Z401 1863 aa13.77□□□□□ -0.21
SRRM1-216ENST00000489130 ZDHHC14Q8IZN3 488 aa13.77□□□□□ -0.21
SRRM1-216ENST00000489130 PIK3R5Q8WYR1 880 aa13.77□□□□□ -0.21
SRRM1-216ENST00000489130 CALML4Q96GE6 196 aa13.77□□□□□ -0.21
SRRM1-216ENST00000489130 INTS4Q96HW7 963 aaKnown RBP13.77□□□□□ -0.21
SRRM1-216ENST00000489130 MFSD14AQ96MC6 490 aa13.77□□□□□ -0.21
SRRM1-216ENST00000489130 TTPALQ9BTX7 342 aa13.77□□□□□ -0.21
SRRM1-216ENST00000489130 CCDC94Q9BW85 323 aaPredicted RBP13.77□□□□□ -0.21
SRRM1-216ENST00000489130 PLEKHA4Q9H4M7 779 aa13.77□□□□□ -0.21
SRRM1-216ENST00000489130 TOPORSQ9NS56 1045 aaPredicted RBP13.77□□□□□ -0.21
SRRM1-216ENST00000489130 LARSQ9P2J5 1176 aaKnown RBP13.77□□□□□ -0.21
SRRM1-216ENST00000489130 ODF2LQ9ULJ1 636 aa13.77□□□□□ -0.21
SRRM1-216ENST00000489130 PLXNA3P51805 1871 aa13.76□□□□□ -0.21
SRRM1-216ENST00000489130 TRIOO75962 3097 aa13.76□□□□□ -0.21
SRRM1-216ENST00000489130 NPHP3-ACAD11A0A0J9YXS1 232 aa13.76□□□□□ -0.21
SRRM1-216ENST00000489130 SMIM28A0A1B0GU29 152 aa13.76□□□□□ -0.21
SRRM1-216ENST00000489130 TOM1L1O75674 476 aa13.76□□□□□ -0.21
SRRM1-216ENST00000489130 STRN3Q13033 797 aa13.76□□□□□ -0.21
SRRM1-216ENST00000489130 UPP1Q16831 310 aa13.76□□□□□ -0.21
SRRM1-216ENST00000489130 FAM171A1Q5VUB5 890 aa13.76□□□□□ -0.21
SRRM1-216ENST00000489130 ZPBP2Q6X784 338 aa13.76□□□□□ -0.21
SRRM1-216ENST00000489130 CCDC149Q6ZUS6 474 aa13.76□□□□□ -0.21
SRRM1-216ENST00000489130 PLCD3Q8N3E9 789 aa13.76□□□□□ -0.21
SRRM1-216ENST00000489130 LNX1Q8TBB1 728 aaPredicted RBP13.76□□□□□ -0.21
SRRM1-216ENST00000489130 ASIC4Q96FT7 647 aa13.76□□□□□ -0.21
SRRM1-216ENST00000489130 SNX27Q96L92 541 aa13.76□□□□□ -0.21
SRRM1-216ENST00000489130 UROC1Q96N76 676 aa13.76□□□□□ -0.21
SRRM1-216ENST00000489130 REEP2Q9BRK0 252 aa13.76□□□□□ -0.21
SRRM1-216ENST00000489130 SORCS3Q9UPU3 1222 aa13.76□□□□□ -0.21
SRRM1-216ENST00000489130 TECTAO75443 2155 aa13.76□□□□□ -0.21
SRRM1-216ENST00000489130 CCDC195A0A1B0GUA6 201 aa13.75□□□□□ -0.21
SRRM1-216ENST00000489130 H0YCG3 227 aa13.75□□□□□ -0.21
SRRM1-216ENST00000489130 RFPL2O75678 378 aa13.75□□□□□ -0.21
SRRM1-216ENST00000489130 B3GAT3O94766 335 aa13.75□□□□□ -0.21
SRRM1-216ENST00000489130 RPL17P18621 184 aaKnown RBP13.75□□□□□ -0.21
SRRM1-216ENST00000489130 PLCG1P19174 1290 aa13.75□□□□□ -0.21
SRRM1-216ENST00000489130 SYT1P21579 422 aa13.75□□□□□ -0.21
SRRM1-216ENST00000489130 CLCNKBP51801 687 aa13.75□□□□□ -0.21
SRRM1-216ENST00000489130 ZNF131P52739 623 aa13.75□□□□□ -0.21
SRRM1-216ENST00000489130 NCKAP1LP55160 1127 aa13.75□□□□□ -0.21
SRRM1-216ENST00000489130 OSTNP61366 133 aa13.75□□□□□ -0.21
SRRM1-216ENST00000489130 RESTQ13127 1097 aa13.75□□□□□ -0.21
SRRM1-216ENST00000489130 MTMR3Q13615 1198 aa13.75□□□□□ -0.21
SRRM1-216ENST00000489130 PTPAQ15257 358 aa13.75□□□□□ -0.21
SRRM1-216ENST00000489130 PDXDC1Q6P996 788 aa13.75□□□□□ -0.21
SRRM1-216ENST00000489130 DCLRE1AQ6PJP8 1040 aa13.75□□□□□ -0.21
SRRM1-216ENST00000489130 PRSS55Q6UWB4 352 aaPredicted RBP13.75□□□□□ -0.21
SRRM1-216ENST00000489130 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.75□□□□□ -0.21
SRRM1-216ENST00000489130 OTOP3Q7RTS5 596 aa13.75□□□□□ -0.21
SRRM1-216ENST00000489130 ZBTB33Q86T24 672 aa13.75□□□□□ -0.21
SRRM1-216ENST00000489130 GPBP1Q86WP2 473 aa13.75□□□□□ -0.21
SRRM1-216ENST00000489130 PALB2Q86YC2 1186 aa13.75□□□□□ -0.21
SRRM1-216ENST00000489130 UBALD2Q8IYN6 164 aa13.75□□□□□ -0.21
SRRM1-216ENST00000489130 KREMEN2Q8NCW0 462 aa13.75□□□□□ -0.21
SRRM1-216ENST00000489130 ZNF707Q96C28 371 aaPredicted RBP13.75□□□□□ -0.21
SRRM1-216ENST00000489130 FAM122AQ96E09 287 aa13.75□□□□□ -0.21
SRRM1-216ENST00000489130 ZMAT2Q96NC0 199 aaKnown RBP13.75□□□□□ -0.21
SRRM1-216ENST00000489130 ACAP3Q96P50 834 aa13.75□□□□□ -0.21
SRRM1-216ENST00000489130 CLSTN3Q9BQT9 956 aa13.75□□□□□ -0.21
SRRM1-216ENST00000489130 TCHPQ9BT92 498 aa13.75□□□□□ -0.21
SRRM1-216ENST00000489130 CCSER1Q9C0I3 900 aa13.75□□□□□ -0.21
SRRM1-216ENST00000489130 KCNH6Q9H252 994 aa13.75□□□□□ -0.21
SRRM1-216ENST00000489130 WDR6Q9NNW5 1121 aaKnown RBP13.75□□□□□ -0.21
SRRM1-216ENST00000489130 BLOC1S4Q9NUP1 217 aa13.75□□□□□ -0.21
SRRM1-216ENST00000489130 SLC38A7Q9NVC3 462 aa13.75□□□□□ -0.21
SRRM1-216ENST00000489130 ZDHHC7Q9NXF8 308 aa13.75□□□□□ -0.21
SRRM1-216ENST00000489130 CNTN3Q9P232 1028 aa13.75□□□□□ -0.21
SRRM1-216ENST00000489130 ANKFY1Q9P2R3 1169 aa13.75□□□□□ -0.21
SRRM1-216ENST00000489130 K7ELQ4 463 aaPredicted RBP13.74□□□□□ -0.21
SRRM1-216ENST00000489130 MEFVO15553 781 aaPredicted RBP13.74□□□□□ -0.21
SRRM1-216ENST00000489130 SPATA31D3P0C874 917 aa13.74□□□□□ -0.21
SRRM1-216ENST00000489130 KCNE1P15382 129 aa13.74□□□□□ -0.21
SRRM1-216ENST00000489130 SCP2P22307 547 aa13.74□□□□□ -0.21
SRRM1-216ENST00000489130 FGFR3P22607 806 aa13.74□□□□□ -0.21
SRRM1-216ENST00000489130 IGFBP6P24592 240 aaPredicted RBP13.74□□□□□ -0.21
SRRM1-216ENST00000489130 SOX4Q06945 474 aaPredicted RBP13.74□□□□□ -0.21
SRRM1-216ENST00000489130 MCL1Q07820 350 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms