RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 USP6NLQ92738 828 aa17.21■□□□□ 0.35
MCF2L-229ENST00000488765 INPP5DQ92835 1189 aa17.21■□□□□ 0.35
MCF2L-229ENST00000488765 FAM192AQ9GZU8 254 aa17.21■□□□□ 0.35
MCF2L-229ENST00000488765 DCTN3O75935 186 aa17.21■□□□□ 0.34
MCF2L-229ENST00000488765 SYN2Q92777 582 aaPredicted RBP17.21■□□□□ 0.34
MCF2L-229ENST00000488765 FAM84BQ96KN1 310 aaPredicted RBP17.21■□□□□ 0.34
MCF2L-229ENST00000488765 PFDN4Q9NQP4 134 aa17.21■□□□□ 0.34
MCF2L-229ENST00000488765 ATP5HO75947 161 aa17.2■□□□□ 0.34
MCF2L-229ENST00000488765 TDP2O95551 362 aa17.2■□□□□ 0.34
MCF2L-229ENST00000488765 PGM1P36871 562 aa17.2■□□□□ 0.34
MCF2L-229ENST00000488765 CASP5P51878 434 aa17.2■□□□□ 0.34
MCF2L-229ENST00000488765 KDSRQ06136 332 aa17.2■□□□□ 0.34
MCF2L-229ENST00000488765 RASSF3Q86WH2 238 aa17.2■□□□□ 0.34
MCF2L-229ENST00000488765 TAOK3Q9H2K8 898 aa17.2■□□□□ 0.34
MCF2L-229ENST00000488765 TAS2R1Q9NYW7 299 aa17.2■□□□□ 0.34
MCF2L-229ENST00000488765 CHD4Q14839 1912 aa17.2■□□□□ 0.34
MCF2L-229ENST00000488765 TRIM43BA6NCK2 446 aa17.2■□□□□ 0.34
MCF2L-229ENST00000488765 USP17L3A6NCW0 530 aa17.2■□□□□ 0.34
MCF2L-229ENST00000488765 USP17L4A6NCW7 530 aa17.2■□□□□ 0.34
MCF2L-229ENST00000488765 FAM47DPA6NHR8 397 aa17.2■□□□□ 0.34
MCF2L-229ENST00000488765 CLDN3O15551 220 aa17.2■□□□□ 0.34
MCF2L-229ENST00000488765 PHF2O75151 1096 aa17.2■□□□□ 0.34
MCF2L-229ENST00000488765 CDK7P50613 346 aa17.2■□□□□ 0.34
MCF2L-229ENST00000488765 TNFAIP8L3Q5GJ75 292 aa17.2■□□□□ 0.34
MCF2L-229ENST00000488765 LRRC8BQ6P9F7 803 aa17.2■□□□□ 0.34
MCF2L-229ENST00000488765 BTNL9Q6UXG8 535 aa17.2■□□□□ 0.34
MCF2L-229ENST00000488765 RBM44Q6ZP01 1051 aaKnown RBP17.2■□□□□ 0.34
MCF2L-229ENST00000488765 FAM196AQ6ZSG2 479 aa17.2■□□□□ 0.34
MCF2L-229ENST00000488765 RAPH1Q70E73 1250 aa17.2■□□□□ 0.34
MCF2L-229ENST00000488765 USP17L1Q7RTZ2 530 aa17.2■□□□□ 0.34
MCF2L-229ENST00000488765 SLFN11Q7Z7L1 901 aa17.2■□□□□ 0.34
MCF2L-229ENST00000488765 EFCAB3Q8N7B9 438 aa17.2■□□□□ 0.34
MCF2L-229ENST00000488765 PYDC1Q8WXC3 89 aa17.2■□□□□ 0.34
MCF2L-229ENST00000488765 RPGRQ92834 1020 aaKnown RBP17.2■□□□□ 0.34
MCF2L-229ENST00000488765 ARHGEF1Q92888 912 aaKnown RBP17.2■□□□□ 0.34
MCF2L-229ENST00000488765 SYNCQ9H7C4 482 aa17.2■□□□□ 0.34
MCF2L-229ENST00000488765 PPM1HQ9ULR3 514 aa17.2■□□□□ 0.34
MCF2L-229ENST00000488765 A0A1W2PPM1 405 aa17.19■□□□□ 0.34
MCF2L-229ENST00000488765 FAM187AA6NFU0 413 aa17.19■□□□□ 0.34
MCF2L-229ENST00000488765 H3BRJ5 948 aa17.19■□□□□ 0.34
MCF2L-229ENST00000488765 SLC35G1Q2M3R5 365 aa17.19■□□□□ 0.34
MCF2L-229ENST00000488765 DAB2IPQ5VWQ8 1189 aa17.19■□□□□ 0.34
MCF2L-229ENST00000488765 TRIM50Q86XT4 487 aa17.19■□□□□ 0.34
MCF2L-229ENST00000488765 BTBD10Q9BSF8 475 aa17.19■□□□□ 0.34
MCF2L-229ENST00000488765 GCNT4Q9P109 453 aa17.19■□□□□ 0.34
MCF2L-229ENST00000488765 ZNF219Q9P2Y4 722 aaPredicted RBP17.19■□□□□ 0.34
MCF2L-229ENST00000488765 PAIP2BQ9ULR5 123 aaKnown RBP17.19■□□□□ 0.34
MCF2L-229ENST00000488765 COMMD3-BMI1R4GMX3 469 aa17.19■□□□□ 0.34
MCF2L-229ENST00000488765 CYTH3O43739 400 aa17.19■□□□□ 0.34
MCF2L-229ENST00000488765 ZNF862O60290 1169 aa17.19■□□□□ 0.34
MCF2L-229ENST00000488765 ESRRAP11474 423 aaPredicted RBP17.19■□□□□ 0.34
MCF2L-229ENST00000488765 VCAM1P19320 739 aa17.19■□□□□ 0.34
MCF2L-229ENST00000488765 CA8P35219 290 aa17.19■□□□□ 0.34
MCF2L-229ENST00000488765 ADCY8P40145 1251 aa17.19■□□□□ 0.34
MCF2L-229ENST00000488765 ITGA8P53708 1063 aa17.19■□□□□ 0.34
MCF2L-229ENST00000488765 DSG1Q02413 1049 aa17.19■□□□□ 0.34
MCF2L-229ENST00000488765 KRT17Q04695 432 aa17.19■□□□□ 0.34
MCF2L-229ENST00000488765 MOGSQ13724 837 aa17.19■□□□□ 0.34
MCF2L-229ENST00000488765 PKN2Q16513 984 aaKnown RBP17.19■□□□□ 0.34
MCF2L-229ENST00000488765 SH3D19Q5HYK7 790 aa17.19■□□□□ 0.34
MCF2L-229ENST00000488765 DPY19L2Q6NUT2 758 aa17.19■□□□□ 0.34
MCF2L-229ENST00000488765 APLFQ8IW19 511 aaPredicted RBP17.19■□□□□ 0.34
MCF2L-229ENST00000488765 ST13P4Q8IZP2 240 aaPredicted RBP17.19■□□□□ 0.34
MCF2L-229ENST00000488765 LIN28AQ9H9Z2 209 aaKnown RBP17.19■□□□□ 0.34
MCF2L-229ENST00000488765 SAP30BPQ9UHR5 308 aaKnown RBP17.19■□□□□ 0.34
MCF2L-229ENST00000488765 ADAMTS7Q9UKP4 1686 aa17.19■□□□□ 0.34
MCF2L-229ENST00000488765 SLC37A4O43826 429 aa17.19■□□□□ 0.34
MCF2L-229ENST00000488765 EEF2P13639 858 aaKnown RBP17.19■□□□□ 0.34
MCF2L-229ENST00000488765 DHX34Q14147 1143 aaKnown RBP17.19■□□□□ 0.34
MCF2L-229ENST00000488765 MFSD5Q6N075 450 aa17.19■□□□□ 0.34
MCF2L-229ENST00000488765 RDH13Q8NBN7 331 aa17.19■□□□□ 0.34
MCF2L-229ENST00000488765 SERPINB12Q96P63 405 aa17.19■□□□□ 0.34
MCF2L-229ENST00000488765 THTPAQ9BU02 230 aa17.19■□□□□ 0.34
MCF2L-229ENST00000488765 HEMGNQ9BXL5 484 aa17.19■□□□□ 0.34
MCF2L-229ENST00000488765 EDEM3Q9BZQ6 932 aa17.19■□□□□ 0.34
MCF2L-229ENST00000488765 PKD1L3Q7Z443 1732 aa17.19■□□□□ 0.34
MCF2L-229ENST00000488765 PSMD7P51665 324 aa17.18■□□□□ 0.34
MCF2L-229ENST00000488765 HPCAP84074 193 aa17.18■□□□□ 0.34
MCF2L-229ENST00000488765 R3HDM1Q15032 1099 aaKnown RBP17.18■□□□□ 0.34
MCF2L-229ENST00000488765 TPTE2Q6XPS3 522 aa17.18■□□□□ 0.34
MCF2L-229ENST00000488765 WDR66Q8TBY9 1149 aa17.18■□□□□ 0.34
MCF2L-229ENST00000488765 C10orf82Q8WW14 230 aa17.18■□□□□ 0.34
MCF2L-229ENST00000488765 ELMO3Q96BJ8 720 aa17.18■□□□□ 0.34
MCF2L-229ENST00000488765 SMCO2A6NFE2 343 aa17.18■□□□□ 0.34
MCF2L-229ENST00000488765 CCDC22O60826 627 aa17.18■□□□□ 0.34
MCF2L-229ENST00000488765 LMNAP02545 664 aaKnown RBP17.18■□□□□ 0.34
MCF2L-229ENST00000488765 TFPTP0C1Z6 253 aa17.18■□□□□ 0.34
MCF2L-229ENST00000488765 ALDH1B1P30837 517 aa17.18■□□□□ 0.34
MCF2L-229ENST00000488765 SFSWAPQ12872 951 aaKnown RBP17.18■□□□□ 0.34
MCF2L-229ENST00000488765 NFIXQ14938 502 aa17.18■□□□□ 0.34
MCF2L-229ENST00000488765 SLC44A4Q53GD3 710 aa17.18■□□□□ 0.34
MCF2L-229ENST00000488765 TMEM110Q86TL2 294 aa17.18■□□□□ 0.34
MCF2L-229ENST00000488765 LRRC6Q86X45 466 aa17.18■□□□□ 0.34
MCF2L-229ENST00000488765 DYNLL2Q96FJ2 89 aa17.18■□□□□ 0.34
MCF2L-229ENST00000488765 ECSITQ9BQ95 431 aa17.18■□□□□ 0.34
MCF2L-229ENST00000488765 MTA3Q9BTC8 594 aa17.18■□□□□ 0.34
MCF2L-229ENST00000488765 SMYD3Q9H7B4 428 aa17.18■□□□□ 0.34
MCF2L-229ENST00000488765 PCDHGB4Q9UN71 923 aa17.18■□□□□ 0.34
MCF2L-229ENST00000488765 PCDHGB5Q9Y5G0 923 aa17.18■□□□□ 0.34
MCF2L-229ENST00000488765 SFI1A8K8P3 1242 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms