RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 DOK3Q7L591 496 aa5.95□□□□□ -1.46
SMC4-218ENST00000486711 TAS1R1Q7RTX1 841 aa5.95□□□□□ -1.46
SMC4-218ENST00000486711 TCEAL8Q8IYN2 117 aa5.95□□□□□ -1.46
SMC4-218ENST00000486711 RSAD2Q8WXG1 361 aa5.95□□□□□ -1.46
SMC4-218ENST00000486711 AUTS2Q8WXX7 1259 aa5.95□□□□□ -1.46
SMC4-218ENST00000486711 RHOBTB2Q9BYZ6 727 aa5.95□□□□□ -1.46
SMC4-218ENST00000486711 PACSIN3Q9UKS6 424 aa5.95□□□□□ -1.46
SMC4-218ENST00000486711 USP18Q9UMW8 372 aa5.95□□□□□ -1.46
SMC4-218ENST00000486711 GPR45Q9Y5Y3 372 aa5.95□□□□□ -1.46
SMC4-218ENST00000486711 NUMBLQ9Y6R0 609 aa5.95□□□□□ -1.46
SMC4-218ENST00000486711 PRC1O43663 620 aa5.94□□□□□ -1.46
SMC4-218ENST00000486711 LPLP06858 475 aa5.94□□□□□ -1.46
SMC4-218ENST00000486711 LAG3P18627 525 aa5.94□□□□□ -1.46
SMC4-218ENST00000486711 ADRA1BP35368 520 aa5.94□□□□□ -1.46
SMC4-218ENST00000486711 GZMKP49863 264 aa5.94□□□□□ -1.46
SMC4-218ENST00000486711 NXNQ6DKJ4 435 aa5.94□□□□□ -1.46
SMC4-218ENST00000486711 CXorf57Q6NSI4 855 aaKnown RBP5.94□□□□□ -1.46
SMC4-218ENST00000486711 DPY19L2P1Q6NXN4 242 aa5.94□□□□□ -1.46
SMC4-218ENST00000486711 LMBR1LQ6UX01 489 aa5.94□□□□□ -1.46
SMC4-218ENST00000486711 VRK3Q8IV63 474 aa5.94□□□□□ -1.46
SMC4-218ENST00000486711 GAB3Q8WWW8 586 aa5.94□□□□□ -1.46
SMC4-218ENST00000486711 HSPBAP1Q96EW2 488 aa5.94□□□□□ -1.46
SMC4-218ENST00000486711 TEKT5Q96M29 485 aa5.94□□□□□ -1.46
SMC4-218ENST00000486711 NDC1Q9BTX1 674 aa5.94□□□□□ -1.46
SMC4-218ENST00000486711 SLC46A2Q9BY10 475 aa5.94□□□□□ -1.46
SMC4-218ENST00000486711 CPEB1Q9BZB8 566 aaKnown RBP5.94□□□□□ -1.46
SMC4-218ENST00000486711 KCNH6Q9H252 994 aa5.94□□□□□ -1.46
SMC4-218ENST00000486711 KCTD10Q9H3F6 313 aa5.94□□□□□ -1.46
SMC4-218ENST00000486711 CLCA2Q9UQC9 943 aa5.94□□□□□ -1.46
SMC4-218ENST00000486711 GRID2IPA4D2P6 1211 aa5.93□□□□□ -1.46
SMC4-218ENST00000486711 B3GALT2O43825 422 aa5.93□□□□□ -1.46
SMC4-218ENST00000486711 PCDHGA12O60330 932 aa5.93□□□□□ -1.46
SMC4-218ENST00000486711 LMNAP02545 664 aaKnown RBP5.93□□□□□ -1.46
SMC4-218ENST00000486711 OSMP13725 252 aa5.93□□□□□ -1.46
SMC4-218ENST00000486711 AGXTP21549 392 aa5.93□□□□□ -1.46
SMC4-218ENST00000486711 CYP2C19P33261 490 aa5.93□□□□□ -1.46
SMC4-218ENST00000486711 LGALS4P56470 323 aa5.93□□□□□ -1.46
SMC4-218ENST00000486711 KRTAP1-1Q07627 177 aa5.93□□□□□ -1.46
SMC4-218ENST00000486711 ODF1Q14990 250 aa5.93□□□□□ -1.46
SMC4-218ENST00000486711 PITRM1Q5JRX3 1037 aa5.93□□□□□ -1.46
SMC4-218ENST00000486711 CMTR2Q8IYT2 770 aaKnown RBP5.93□□□□□ -1.46
SMC4-218ENST00000486711 OR14C36Q8NHC7 312 aa5.93□□□□□ -1.46
SMC4-218ENST00000486711 JADE3Q92613 823 aa5.93□□□□□ -1.46
SMC4-218ENST00000486711 NUP88Q99567 741 aaPredicted RBP5.93□□□□□ -1.46
SMC4-218ENST00000486711 FDXACB1Q9BRP7 624 aaPredicted RBP5.93□□□□□ -1.46
SMC4-218ENST00000486711 LSM14BQ9BX40 385 aaKnown RBP5.93□□□□□ -1.46
SMC4-218ENST00000486711 ZBTB21Q9ULJ3 1066 aa5.93□□□□□ -1.46
SMC4-218ENST00000486711 PCDHGA9Q9Y5G4 932 aaKnown RBP5.93□□□□□ -1.46
SMC4-218ENST00000486711 PCDHGA8Q9Y5G5 932 aa5.93□□□□□ -1.46
SMC4-218ENST00000486711 PCDHGA7Q9Y5G6 932 aa5.93□□□□□ -1.46
SMC4-218ENST00000486711 PCDHGA6Q9Y5G7 932 aa5.93□□□□□ -1.46
SMC4-218ENST00000486711 PCDHGA3Q9Y5H0 932 aa5.93□□□□□ -1.46
SMC4-218ENST00000486711 PCDHGA2Q9Y5H1 932 aa5.93□□□□□ -1.46
SMC4-218ENST00000486711 MTNR1BP49286 362 aa5.92□□□□□ -1.46
SMC4-218ENST00000486711 PPARAQ07869 468 aa5.92□□□□□ -1.46
SMC4-218ENST00000486711 MGAT5Q09328 741 aa5.92□□□□□ -1.46
SMC4-218ENST00000486711 GFOD2Q3B7J2 385 aa5.92□□□□□ -1.46
SMC4-218ENST00000486711 GLB1L2Q8IW92 636 aa5.92□□□□□ -1.46
SMC4-218ENST00000486711 MIER2Q8N344 545 aa5.92□□□□□ -1.46
SMC4-218ENST00000486711 MSL3Q8N5Y2 521 aaKnown RBP5.92□□□□□ -1.46
SMC4-218ENST00000486711 MAGEB6Q8N7X4 407 aa5.92□□□□□ -1.46
SMC4-218ENST00000486711 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.92□□□□□ -1.46
SMC4-218ENST00000486711 MYEOVQ96EZ4 313 aa5.92□□□□□ -1.46
SMC4-218ENST00000486711 DCLRE1CQ96SD1 692 aaKnown RBP5.92□□□□□ -1.46
SMC4-218ENST00000486711 ZNF768Q9H5H4 540 aaKnown RBP5.92□□□□□ -1.46
SMC4-218ENST00000486711 DPP7Q9UHL4 492 aa5.92□□□□□ -1.46
SMC4-218ENST00000486711 A0A1W2PR48 441 aa5.91□□□□□ -1.46
SMC4-218ENST00000486711 AHRRA9YTQ3 701 aa5.91□□□□□ -1.46
SMC4-218ENST00000486711 PRR5-ARHGAP8B1AHC4 643 aa5.91□□□□□ -1.46
SMC4-218ENST00000486711 NUDT3O95989 172 aa5.91□□□□□ -1.46
SMC4-218ENST00000486711 ZFP36P26651 326 aaKnown RBP5.91□□□□□ -1.46
SMC4-218ENST00000486711 APOBEC3AP31941 199 aaPredicted RBP5.91□□□□□ -1.46
SMC4-218ENST00000486711 SLC16A1P53985 500 aa5.91□□□□□ -1.46
SMC4-218ENST00000486711 TBX4P57082 545 aa5.91□□□□□ -1.46
SMC4-218ENST00000486711 CDK17Q00537 523 aa5.91□□□□□ -1.46
SMC4-218ENST00000486711 TAP1Q03518 808 aa5.91□□□□□ -1.46
SMC4-218ENST00000486711 MUM1Q2TAK8 710 aa5.91□□□□□ -1.46
SMC4-218ENST00000486711 MINDY4Q4G0A6 757 aa5.91□□□□□ -1.46
SMC4-218ENST00000486711 HECTD2Q5U5R9 776 aa5.91□□□□□ -1.46
SMC4-218ENST00000486711 KCNK18Q7Z418 384 aa5.91□□□□□ -1.46
SMC4-218ENST00000486711 C14orf80Q86SX3 495 aa5.91□□□□□ -1.46
SMC4-218ENST00000486711 TPH2Q8IWU9 490 aa5.91□□□□□ -1.46
SMC4-218ENST00000486711 CCAR1Q8IX12 1150 aaKnown RBP5.91□□□□□ -1.46
SMC4-218ENST00000486711 GPR150Q8NGU9 434 aa5.91□□□□□ -1.46
SMC4-218ENST00000486711 TTC8Q8TAM2 541 aa5.91□□□□□ -1.46
SMC4-218ENST00000486711 ACE2Q9BYF1 805 aaPredicted RBP5.91□□□□□ -1.46
SMC4-218ENST00000486711 TOR3AQ9H497 397 aa5.91□□□□□ -1.46
SMC4-218ENST00000486711 IFT122Q9HBG6 1241 aa5.91□□□□□ -1.46
SMC4-218ENST00000486711 CYP4F11Q9HBI6 524 aa5.91□□□□□ -1.46
SMC4-218ENST00000486711 ZNF277Q9NRM2 450 aaPredicted RBP5.91□□□□□ -1.46
SMC4-218ENST00000486711 TRPM5Q9NZQ8 1165 aa5.91□□□□□ -1.46
SMC4-218ENST00000486711 PRSS50Q9UI38 385 aa5.91□□□□□ -1.46
SMC4-218ENST00000486711 CENPVL1A0A0U1RR11 272 aa5.9□□□□□ -1.46
SMC4-218ENST00000486711 NDUFS2O75306 463 aa5.9□□□□□ -1.46
SMC4-218ENST00000486711 ADKP55263 362 aaKnown RBP5.9□□□□□ -1.46
SMC4-218ENST00000486711 GTF2H3Q13889 308 aa5.9□□□□□ -1.46
SMC4-218ENST00000486711 HLTFQ14527 1009 aaKnown RBP eCLIP5.9□□□□□ -1.46
SMC4-218ENST00000486711 ANO4Q32M45 955 aa5.9□□□□□ -1.46
SMC4-218ENST00000486711 GDF7Q7Z4P5 450 aa5.9□□□□□ -1.46
SMC4-218ENST00000486711 PRDM12Q9H4Q4 367 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms