RNA–Protein interactions for RNA: ENST00000486429.1

CLDN11-206, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 998 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-206ENST00000486429 ZSCAN22P10073 491 aaPredicted RBP20.05■□□□□ 0.8
CLDN11-206ENST00000486429 DDIT3P35638 169 aa20.05■□□□□ 0.8
CLDN11-206ENST00000486429 DSG1Q02413 1049 aa20.05■□□□□ 0.8
CLDN11-206ENST00000486429 NAB2Q15742 525 aa20.05■□□□□ 0.8
CLDN11-206ENST00000486429 USP41Q3LFD5 358 aa20.05■□□□□ 0.8
CLDN11-206ENST00000486429 FOXD4L5Q5VV16 416 aaPredicted RBP20.05■□□□□ 0.8
CLDN11-206ENST00000486429 CES5AQ6NT32 575 aa20.05■□□□□ 0.8
CLDN11-206ENST00000486429 CCDC73Q6ZRK6 1079 aa20.05■□□□□ 0.8
CLDN11-206ENST00000486429 LINC00301Q8NCQ3 95 aa20.05■□□□□ 0.8
CLDN11-206ENST00000486429 HASPINQ8TF76 798 aa20.05■□□□□ 0.8
CLDN11-206ENST00000486429 FOXD4L4Q8WXT5 416 aaPredicted RBP20.05■□□□□ 0.8
CLDN11-206ENST00000486429 KHSRPQ92945 711 aaKnown RBP eCLIP20.05■□□□□ 0.8
CLDN11-206ENST00000486429 KCNN1Q92952 543 aa20.05■□□□□ 0.8
CLDN11-206ENST00000486429 SNX27Q96L92 541 aa20.05■□□□□ 0.8
CLDN11-206ENST00000486429 PPP1R10Q96QC0 940 aaKnown RBP20.05■□□□□ 0.8
CLDN11-206ENST00000486429 PHF7Q9BWX1 381 aaPredicted RBP20.05■□□□□ 0.8
CLDN11-206ENST00000486429 GPR62Q9BZJ7 368 aa20.05■□□□□ 0.8
CLDN11-206ENST00000486429 SPDYE4A6NLX3 237 aa20.04■□□□□ 0.8
CLDN11-206ENST00000486429 TRAK2O60296 914 aa20.04■□□□□ 0.8
CLDN11-206ENST00000486429 STAT6P42226 847 aa20.04■□□□□ 0.8
CLDN11-206ENST00000486429 MATR3P43243 847 aaKnown RBP eCLIP20.04■□□□□ 0.8
CLDN11-206ENST00000486429 ITIH3Q06033 890 aa20.04■□□□□ 0.8
CLDN11-206ENST00000486429 KIAA0319Q5VV43 1072 aa20.04■□□□□ 0.8
CLDN11-206ENST00000486429 B3GALT6Q96L58 329 aa20.04■□□□□ 0.8
CLDN11-206ENST00000486429 FBXL18Q96ME1 805 aa20.04■□□□□ 0.8
CLDN11-206ENST00000486429 ACAP3Q96P50 834 aa20.04■□□□□ 0.8
CLDN11-206ENST00000486429 C1QTNF1Q9BXJ1 281 aa20.04■□□□□ 0.8
CLDN11-206ENST00000486429 CHST7Q9NS84 486 aa20.04■□□□□ 0.8
CLDN11-206ENST00000486429 HNRNPDLO14979 420 aaKnown RBP20.03■□□□□ 0.8
CLDN11-206ENST00000486429 SPTLC2O15270 562 aa20.03■□□□□ 0.8
CLDN11-206ENST00000486429 TEX28O15482 410 aa20.03■□□□□ 0.8
CLDN11-206ENST00000486429 CLDN3O15551 220 aa20.03■□□□□ 0.8
CLDN11-206ENST00000486429 YEATS4O95619 227 aa20.03■□□□□ 0.8
CLDN11-206ENST00000486429 F13A1P00488 732 aa20.03■□□□□ 0.8
CLDN11-206ENST00000486429 ABCD1P33897 745 aa20.03■□□□□ 0.8
CLDN11-206ENST00000486429 LIG4P49917 911 aa20.03■□□□□ 0.8
CLDN11-206ENST00000486429 CLCN4P51793 760 aa20.03■□□□□ 0.8
CLDN11-206ENST00000486429 CREMQ03060 361 aa20.03■□□□□ 0.8
CLDN11-206ENST00000486429 RARS2Q5T160 578 aaKnown RBP20.03■□□□□ 0.8
CLDN11-206ENST00000486429 SPRYD3Q8NCJ5 442 aa20.03■□□□□ 0.8
CLDN11-206ENST00000486429 ZBTB45Q96K62 511 aaPredicted RBP20.03■□□□□ 0.8
CLDN11-206ENST00000486429 UROC1Q96N76 676 aa20.03■□□□□ 0.8
CLDN11-206ENST00000486429 ADAM7Q9H2U9 754 aa20.03■□□□□ 0.8
CLDN11-206ENST00000486429 EPHX3Q9H6B9 360 aa20.03■□□□□ 0.8
CLDN11-206ENST00000486429 SFXN1Q9H9B4 322 aa20.03■□□□□ 0.8
CLDN11-206ENST00000486429 RXFP1Q9HBX9 757 aa20.03■□□□□ 0.8
CLDN11-206ENST00000486429 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.03■□□□□ 0.8
CLDN11-206ENST00000486429 SLC38A7Q9NVC3 462 aa20.03■□□□□ 0.8
CLDN11-206ENST00000486429 TBX20Q9UMR3 447 aa20.03■□□□□ 0.8
CLDN11-206ENST00000486429 SMIM28A0A1B0GU29 152 aa20.02■□□□□ 0.8
CLDN11-206ENST00000486429 TMEM189-UBE2V1I3L0A0 370 aa20.02■□□□□ 0.8
CLDN11-206ENST00000486429 MCL1Q07820 350 aa20.02■□□□□ 0.8
CLDN11-206ENST00000486429 ELAVL2Q12926 359 aaKnown RBP20.02■□□□□ 0.8
CLDN11-206ENST00000486429 XKR4Q5GH76 650 aa20.02■□□□□ 0.8
CLDN11-206ENST00000486429 ELMSAN1Q6PJG2 1045 aa20.02■□□□□ 0.8
CLDN11-206ENST00000486429 SV2BQ7L1I2 683 aa20.02■□□□□ 0.8
CLDN11-206ENST00000486429 DYMQ7RTS9 669 aa20.02■□□□□ 0.8
CLDN11-206ENST00000486429 GPR65Q8IYL9 337 aa20.02■□□□□ 0.8
CLDN11-206ENST00000486429 C12orf76Q8N812 135 aaPredicted RBP20.02■□□□□ 0.8
CLDN11-206ENST00000486429 RIN2Q8WYP3 895 aaPredicted RBP20.02■□□□□ 0.8
CLDN11-206ENST00000486429 NECTIN4Q96NY8 510 aa20.02■□□□□ 0.8
CLDN11-206ENST00000486429 CNTN3Q9P232 1028 aa20.02■□□□□ 0.8
CLDN11-206ENST00000486429 TFIP11Q9UBB9 837 aaKnown RBP20.02■□□□□ 0.8
CLDN11-206ENST00000486429 CITO14578 2027 aa20.02■□□□□ 0.79
CLDN11-206ENST00000486429 C5orf42Q9H799 3197 aa20.01■□□□□ 0.79
CLDN11-206ENST00000486429 LOC730098B7Z3J9 87 aa20.01■□□□□ 0.79
CLDN11-206ENST00000486429 PI4K2BG5E9Z4 385 aa20.01■□□□□ 0.79
CLDN11-206ENST00000486429 DCXO43602 365 aa20.01■□□□□ 0.79
CLDN11-206ENST00000486429 PPP6R2O75170 966 aa20.01■□□□□ 0.79
CLDN11-206ENST00000486429 GLUD1P00367 558 aa20.01■□□□□ 0.79
CLDN11-206ENST00000486429 PIGRP01833 764 aa20.01■□□□□ 0.79
CLDN11-206ENST00000486429 ALADP13716 330 aa20.01■□□□□ 0.79
CLDN11-206ENST00000486429 KCNE1P15382 129 aa20.01■□□□□ 0.79
CLDN11-206ENST00000486429 MTHFRP42898 656 aa20.01■□□□□ 0.79
CLDN11-206ENST00000486429 RTP2Q5QGT7 225 aa20.01■□□□□ 0.79
CLDN11-206ENST00000486429 FAM171A1Q5VUB5 890 aa20.01■□□□□ 0.79
CLDN11-206ENST00000486429 ALKAL1Q6UXT8 129 aa20.01■□□□□ 0.79
CLDN11-206ENST00000486429 RPGRIP1Q96KN7 1286 aa20.01■□□□□ 0.79
CLDN11-206ENST00000486429 RIPOR3Q96MK2 946 aa20.01■□□□□ 0.79
CLDN11-206ENST00000486429 FIZ1Q96SL8 496 aa20.01■□□□□ 0.79
CLDN11-206ENST00000486429 GOLGA2P5Q9HBQ8 144 aa20.01■□□□□ 0.79
CLDN11-206ENST00000486429 CDH22Q9UJ99 828 aa20.01■□□□□ 0.79
CLDN11-206ENST00000486429 PLXNA3P51805 1871 aa20.01■□□□□ 0.79
CLDN11-206ENST00000486429 A0A087X0B3 334 aa20■□□□□ 0.79
CLDN11-206ENST00000486429 B3GAT3O94766 335 aa20■□□□□ 0.79
CLDN11-206ENST00000486429 NMT1P30419 496 aaKnown RBP20■□□□□ 0.79
CLDN11-206ENST00000486429 CLCNKBP51801 687 aa20■□□□□ 0.79
CLDN11-206ENST00000486429 FOXD4L6Q3SYB3 417 aaPredicted RBP20■□□□□ 0.79
CLDN11-206ENST00000486429 SEZ6Q53EL9 994 aa20■□□□□ 0.79
CLDN11-206ENST00000486429 FOXD4L3Q6VB84 417 aaPredicted RBP20■□□□□ 0.79
CLDN11-206ENST00000486429 SFR1Q86XK3 245 aa20■□□□□ 0.79
CLDN11-206ENST00000486429 MAP4K3Q8IVH8 894 aa20■□□□□ 0.79
CLDN11-206ENST00000486429 PDILTQ8N807 584 aa20■□□□□ 0.79
CLDN11-206ENST00000486429 DDX12PQ92771 950 aa20■□□□□ 0.79
CLDN11-206ENST00000486429 ZMAT2Q96NC0 199 aaKnown RBP20■□□□□ 0.79
CLDN11-206ENST00000486429 TTPALQ9BTX7 342 aa20■□□□□ 0.79
CLDN11-206ENST00000486429 MAN1C1Q9NR34 630 aa20■□□□□ 0.79
CLDN11-206ENST00000486429 FNIP2Q9P278 1114 aa20■□□□□ 0.79
CLDN11-206ENST00000486429 DPP7Q9UHL4 492 aa20■□□□□ 0.79
CLDN11-206ENST00000486429 TRIP11Q15643 1979 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms