RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 AKT3Q9Y243 479 aa9.92□□□□□ -0.82
COL8A1-207ENST00000483969 FNDC3AQ9Y2H6 1198 aaKnown RBP9.92□□□□□ -0.82
COL8A1-207ENST00000483969 KDM3AQ9Y4C1 1321 aa9.91□□□□□ -0.82
COL8A1-207ENST00000483969 IGKV6-21A0A0C4DH24 114 aa9.91□□□□□ -0.82
COL8A1-207ENST00000483969 TNFRSF10BO14763 440 aa9.91□□□□□ -0.82
COL8A1-207ENST00000483969 GSC2O15499 205 aa9.91□□□□□ -0.82
COL8A1-207ENST00000483969 ASAP2O43150 1006 aa9.91□□□□□ -0.82
COL8A1-207ENST00000483969 GAS2O43903 313 aaKnown RBP9.91□□□□□ -0.82
COL8A1-207ENST00000483969 ZSCAN22P10073 491 aaPredicted RBP9.91□□□□□ -0.82
COL8A1-207ENST00000483969 GLB1P16278 677 aa9.91□□□□□ -0.82
COL8A1-207ENST00000483969 KCNJ6P48051 423 aa9.91□□□□□ -0.82
COL8A1-207ENST00000483969 POLGP54098 1239 aaPredicted RBP9.91□□□□□ -0.82
COL8A1-207ENST00000483969 NPEPPSP55786 919 aa9.91□□□□□ -0.82
COL8A1-207ENST00000483969 NLRP11P59045 1033 aaKnown RBP9.91□□□□□ -0.82
COL8A1-207ENST00000483969 SMAD3P84022 425 aaKnown RBP9.91□□□□□ -0.82
COL8A1-207ENST00000483969 TMEM62Q0P6H9 643 aa9.91□□□□□ -0.82
COL8A1-207ENST00000483969 FBXO47Q5MNV8 452 aa9.91□□□□□ -0.82
COL8A1-207ENST00000483969 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.91□□□□□ -0.82
COL8A1-207ENST00000483969 LRRC71Q8N4P6 559 aa9.91□□□□□ -0.82
COL8A1-207ENST00000483969 STK32AQ8WU08 396 aa9.91□□□□□ -0.82
COL8A1-207ENST00000483969 TCP11Q8WWU5 503 aa9.91□□□□□ -0.82
COL8A1-207ENST00000483969 VWCEQ96DN2 955 aa9.91□□□□□ -0.82
COL8A1-207ENST00000483969 AK8Q96MA6 479 aa9.91□□□□□ -0.82
COL8A1-207ENST00000483969 CEP89Q96ST8 783 aa9.91□□□□□ -0.82
COL8A1-207ENST00000483969 SUCLA2Q9P2R7 463 aaPredicted RBP9.91□□□□□ -0.82
COL8A1-207ENST00000483969 WRAP73Q9P2S5 460 aaPredicted RBP9.91□□□□□ -0.82
COL8A1-207ENST00000483969 DBR1Q9UK59 544 aaKnown RBP9.91□□□□□ -0.82
COL8A1-207ENST00000483969 DNM3Q9UQ16 869 aa9.91□□□□□ -0.82
COL8A1-207ENST00000483969 GINS2Q9Y248 185 aa9.91□□□□□ -0.82
COL8A1-207ENST00000483969 BRCA2P51587 3418 aa9.91□□□□□ -0.82
COL8A1-207ENST00000483969 KIAA1217Q5T5P2 1943 aa9.9□□□□□ -0.82
COL8A1-207ENST00000483969 TMEM150BA6NC51 233 aa9.9□□□□□ -0.82
COL8A1-207ENST00000483969 VWA3AA6NCI4 1184 aa9.9□□□□□ -0.82
COL8A1-207ENST00000483969 ZBTB39O15060 712 aa9.9□□□□□ -0.82
COL8A1-207ENST00000483969 GPR182O15218 404 aa9.9□□□□□ -0.82
COL8A1-207ENST00000483969 SLC26A4O43511 780 aa9.9□□□□□ -0.82
COL8A1-207ENST00000483969 MED24O75448 989 aa9.9□□□□□ -0.82
COL8A1-207ENST00000483969 RPS6KA5O75582 802 aa9.9□□□□□ -0.82
COL8A1-207ENST00000483969 SMNDC1O75940 238 aaKnown RBP eCLIP9.9□□□□□ -0.82
COL8A1-207ENST00000483969 GHRP10912 638 aa9.9□□□□□ -0.82
COL8A1-207ENST00000483969 LONP1P36776 959 aaKnown RBP9.9□□□□□ -0.82
COL8A1-207ENST00000483969 CLCN3P51790 818 aa9.9□□□□□ -0.82
COL8A1-207ENST00000483969 LPIN1Q14693 890 aa9.9□□□□□ -0.82
COL8A1-207ENST00000483969 IL17AQ16552 155 aa9.9□□□□□ -0.82
COL8A1-207ENST00000483969 PLA2G4FQ68DD2 849 aa9.9□□□□□ -0.82
COL8A1-207ENST00000483969 ATL3Q6DD88 541 aa9.9□□□□□ -0.82
COL8A1-207ENST00000483969 TSHZ1Q6ZSZ6 1077 aa9.9□□□□□ -0.82
COL8A1-207ENST00000483969 LINC01465Q8N7H1 131 aa9.9□□□□□ -0.82
COL8A1-207ENST00000483969 SNX29Q8TEQ0 813 aa9.9□□□□□ -0.82
COL8A1-207ENST00000483969 PIGOQ8TEQ8 1089 aa9.9□□□□□ -0.82
COL8A1-207ENST00000483969 SCLT1Q96NL6 688 aa9.9□□□□□ -0.82
COL8A1-207ENST00000483969 SLC9A7Q96T83 725 aa9.9□□□□□ -0.82
COL8A1-207ENST00000483969 SH2D3AQ9BRG2 576 aa9.9□□□□□ -0.82
COL8A1-207ENST00000483969 FTHL17Q9BXU8 183 aa9.9□□□□□ -0.82
COL8A1-207ENST00000483969 IFIH1Q9BYX4 1025 aaKnown RBP9.9□□□□□ -0.82
COL8A1-207ENST00000483969 INO80BQ9C086 356 aaPredicted RBP9.9□□□□□ -0.82
COL8A1-207ENST00000483969 DHX33Q9H6R0 707 aaKnown RBP9.9□□□□□ -0.82
COL8A1-207ENST00000483969 PCMTD2Q9NV79 361 aa9.9□□□□□ -0.82
COL8A1-207ENST00000483969 MSRAQ9UJ68 235 aa9.9□□□□□ -0.82
COL8A1-207ENST00000483969 CLIC4Q9Y696 253 aa9.9□□□□□ -0.82
COL8A1-207ENST00000483969 ARHGEF35A5YM69 484 aa9.89□□□□□ -0.83
COL8A1-207ENST00000483969 GPR32O75388 356 aa9.89□□□□□ -0.83
COL8A1-207ENST00000483969 AMHP03971 560 aa9.89□□□□□ -0.83
COL8A1-207ENST00000483969 VTNP04004 478 aa9.89□□□□□ -0.83
COL8A1-207ENST00000483969 ATP2A2P16615 1042 aaKnown RBP9.89□□□□□ -0.83
COL8A1-207ENST00000483969 UBA7P41226 1012 aa9.89□□□□□ -0.83
COL8A1-207ENST00000483969 RARRES1P49788 294 aa9.89□□□□□ -0.83
COL8A1-207ENST00000483969 PAK2Q13177 524 aa9.89□□□□□ -0.83
COL8A1-207ENST00000483969 RAB30Q15771 203 aa9.89□□□□□ -0.83
COL8A1-207ENST00000483969 KIZQ2M2Z5 673 aa9.89□□□□□ -0.83
COL8A1-207ENST00000483969 FAM173BQ6P4H8 233 aa9.89□□□□□ -0.83
COL8A1-207ENST00000483969 ZNF410Q86VK4 478 aa9.89□□□□□ -0.83
COL8A1-207ENST00000483969 RHPN2Q8IUC4 686 aa9.89□□□□□ -0.83
COL8A1-207ENST00000483969 PSPC1Q8WXF1 523 aaKnown RBP9.89□□□□□ -0.83
COL8A1-207ENST00000483969 CALML4Q96GE6 196 aa9.89□□□□□ -0.83
COL8A1-207ENST00000483969 CDK5RAP3Q96JB5 506 aa9.89□□□□□ -0.83
COL8A1-207ENST00000483969 MKNK1Q9BUB5 465 aa9.89□□□□□ -0.83
COL8A1-207ENST00000483969 GCOM2Q9BZD3 368 aaPredicted RBP9.89□□□□□ -0.83
COL8A1-207ENST00000483969 NT5C3AQ9H0P0 336 aa9.89□□□□□ -0.83
COL8A1-207ENST00000483969 ADAMTS10Q9H324 1103 aa9.89□□□□□ -0.83
COL8A1-207ENST00000483969 PADI3Q9ULW8 664 aa9.89□□□□□ -0.83
COL8A1-207ENST00000483969 SCN10AQ9Y5Y9 1956 aa9.88□□□□□ -0.83
COL8A1-207ENST00000483969 A0A087WWV3 80 aa9.88□□□□□ -0.83
COL8A1-207ENST00000483969 ENPP3O14638 875 aa9.88□□□□□ -0.83
COL8A1-207ENST00000483969 F13A1P00488 732 aa9.88□□□□□ -0.83
COL8A1-207ENST00000483969 EIF4BP23588 611 aaKnown RBP9.88□□□□□ -0.83
COL8A1-207ENST00000483969 CDC25AP30304 524 aa9.88□□□□□ -0.83
COL8A1-207ENST00000483969 CD52P31358 61 aa9.88□□□□□ -0.83
COL8A1-207ENST00000483969 GPC3P51654 580 aa9.88□□□□□ -0.83
COL8A1-207ENST00000483969 WDR5P61964 334 aaKnown RBP9.88□□□□□ -0.83
COL8A1-207ENST00000483969 CEBPZQ03701 1054 aaKnown RBP9.88□□□□□ -0.83
COL8A1-207ENST00000483969 TFDP1Q14186 410 aa9.88□□□□□ -0.83
COL8A1-207ENST00000483969 MXD4Q14582 209 aaPredicted RBP9.88□□□□□ -0.83
COL8A1-207ENST00000483969 EMC2Q15006 297 aa9.88□□□□□ -0.83
COL8A1-207ENST00000483969 SLC39A14Q15043 492 aa9.88□□□□□ -0.83
COL8A1-207ENST00000483969 STK38Q15208 465 aa9.88□□□□□ -0.83
COL8A1-207ENST00000483969 PTPAQ15257 358 aa9.88□□□□□ -0.83
COL8A1-207ENST00000483969 ZRSR1Q15695 479 aaKnown RBP9.88□□□□□ -0.83
COL8A1-207ENST00000483969 TTC39BQ5VTQ0 682 aaPredicted RBP9.88□□□□□ -0.83
COL8A1-207ENST00000483969 CABP7Q86V35 215 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms