RNA–Protein interactions for RNA: ENST00000483768.1

ZNF561-216, Transcript of zinc finger protein 561, humanhuman

TSL 1 (best)

Gene ZNF561, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561-216ENST00000483768 PWWP2AQ96N64 755 aa3.8□□□□□ -1.8
ZNF561-216ENST00000483768 NELL2Q99435 816 aa3.8□□□□□ -1.8
ZNF561-216ENST00000483768 SEC62Q99442 399 aaKnown RBP3.8□□□□□ -1.8
ZNF561-216ENST00000483768 QRSL1Q9H0R6 528 aaKnown RBP3.8□□□□□ -1.8
ZNF561-216ENST00000483768 XYLT2Q9H1B5 865 aa3.8□□□□□ -1.8
ZNF561-216ENST00000483768 TMEM60Q9H2L4 133 aa3.8□□□□□ -1.8
ZNF561-216ENST00000483768 GPRC5CQ9NQ84 441 aa3.8□□□□□ -1.8
ZNF561-216ENST00000483768 DMRT3Q9NQL9 472 aa3.8□□□□□ -1.8
ZNF561-216ENST00000483768 RASSF1Q9NS23 344 aa3.8□□□□□ -1.8
ZNF561-216ENST00000483768 TOMM22Q9NS69 142 aa3.8□□□□□ -1.8
ZNF561-216ENST00000483768 MAGED2Q9UNF1 606 aaPredicted RBP3.8□□□□□ -1.8
ZNF561-216ENST00000483768 TMX2Q9Y320 296 aa3.8□□□□□ -1.8
ZNF561-216ENST00000483768 SPHKAPQ2M3C7 1700 aa3.8□□□□□ -1.8
ZNF561-216ENST00000483768 LAMC1P11047 1609 aa3.8□□□□□ -1.8
ZNF561-216ENST00000483768 PTPN23Q9H3S7 1636 aa3.8□□□□□ -1.8
ZNF561-216ENST00000483768 LMTK2Q8IWU2 1503 aa3.8□□□□□ -1.8
ZNF561-216ENST00000483768 SHANK3Q9BYB0 1731 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 CROCC2H7BZ55 1655 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 RREB1Q92766 1687 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 H7C1D1 291 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 STXBP3O00186 592 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 EIF3FO00303 357 aaPredicted RBP3.79□□□□□ -1.8
ZNF561-216ENST00000483768 KCNK3O14649 394 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 KDM1AO60341 852 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 BUB1BO60566 1050 aaPredicted RBP3.79□□□□□ -1.8
ZNF561-216ENST00000483768 RPN1P04843 607 aaKnown RBP3.79□□□□□ -1.8
ZNF561-216ENST00000483768 GSNP06396 782 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 THBDP07204 575 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 MSL3P1P0C860 447 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 ZBTB48P10074 688 aaPredicted RBP3.79□□□□□ -1.8
ZNF561-216ENST00000483768 LCP1P13796 627 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 PDCP20941 246 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 CNTFP26441 200 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 HTR1BP28222 390 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 LSP1P33241 339 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 LIMS1P48059 325 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 ADKP55263 362 aaKnown RBP3.79□□□□□ -1.8
ZNF561-216ENST00000483768 ST5P78524 1137 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 APBA1Q02410 837 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 ICA1Q05084 483 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 TAF5Q15542 800 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 TAF12Q16514 161 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 FAM133BQ5BKY9 247 aaKnown RBP3.79□□□□□ -1.8
ZNF561-216ENST00000483768 FAM209BQ5JX69 171 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 DGKKQ5KSL6 1271 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 IZUMO3Q5VZ72 239 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 SWSAP1Q6NVH7 229 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 ANKRD23Q86SG2 305 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 DPP9Q86TI2 863 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 LIX1LQ8IVB5 337 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.79□□□□□ -1.8
ZNF561-216ENST00000483768 NUP133Q8WUM0 1156 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 LRTOMTQ8WZ04 291 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 NELL1Q92832 810 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 ELF4Q99607 663 aaPredicted RBP3.79□□□□□ -1.8
ZNF561-216ENST00000483768 ALG1Q9BT22 464 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 LRFN3Q9BTN0 628 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 AP1M1Q9BXS5 423 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 NUP62CLQ9H1M0 184 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 IPPKQ9H8X2 491 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 SPON1Q9HCB6 807 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 TNFRSF12AQ9NP84 129 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 PDP2Q9P2J9 529 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 GRHPRQ9UBQ7 328 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 TUBD1Q9UJT1 453 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 ACSL6Q9UKU0 697 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 EDARQ9UNE0 448 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 SNX13Q9Y5W8 968 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 GPR45Q9Y5Y3 372 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 FHOD1Q9Y613 1164 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 ADGRL2O95490 1459 aa3.79□□□□□ -1.8
ZNF561-216ENST00000483768 NRAPQ86VF7 1730 aa3.78□□□□□ -1.8
ZNF561-216ENST00000483768 ABCA3Q99758 1704 aa3.78□□□□□ -1.8
ZNF561-216ENST00000483768 PIK3R4Q99570 1358 aa3.78□□□□□ -1.8
ZNF561-216ENST00000483768 PLEKHH1Q9ULM0 1364 aa3.78□□□□□ -1.8
ZNF561-216ENST00000483768 NINLQ9Y2I6 1382 aa3.78□□□□□ -1.8
ZNF561-216ENST00000483768 CAPN8A6NHC0 703 aa3.78□□□□□ -1.8
ZNF561-216ENST00000483768 H0Y8X5 98 aa3.78□□□□□ -1.8
ZNF561-216ENST00000483768 H3BML4 177 aa3.78□□□□□ -1.8
ZNF561-216ENST00000483768 K7ENM7 598 aa3.78□□□□□ -1.8
ZNF561-216ENST00000483768 ARNTLO00327 626 aa3.78□□□□□ -1.8
ZNF561-216ENST00000483768 DDX3XO00571 662 aaKnown RBP eCLIP3.78□□□□□ -1.8
ZNF561-216ENST00000483768 MEFVO15553 781 aaPredicted RBP3.78□□□□□ -1.8
ZNF561-216ENST00000483768 MGEA5O60502 916 aa3.78□□□□□ -1.8
ZNF561-216ENST00000483768 NDUFS2O75306 463 aa3.78□□□□□ -1.8
ZNF561-216ENST00000483768 TIPRLO75663 272 aa3.78□□□□□ -1.8
ZNF561-216ENST00000483768 CSTBP04080 98 aaKnown RBP3.78□□□□□ -1.8
ZNF561-216ENST00000483768 ALDH2P05091 517 aa3.78□□□□□ -1.8
ZNF561-216ENST00000483768 AGXTP21549 392 aa3.78□□□□□ -1.8
ZNF561-216ENST00000483768 KRT20P35900 424 aa3.78□□□□□ -1.8
ZNF561-216ENST00000483768 TECP42680 631 aa3.78□□□□□ -1.8
ZNF561-216ENST00000483768 STT3AP46977 705 aa3.78□□□□□ -1.8
ZNF561-216ENST00000483768 CASP5P51878 434 aa3.78□□□□□ -1.8
ZNF561-216ENST00000483768 CACNB3P54284 484 aa3.78□□□□□ -1.8
ZNF561-216ENST00000483768 ZNF200P98182 395 aaPredicted RBP3.78□□□□□ -1.8
ZNF561-216ENST00000483768 MVKQ03426 396 aa3.78□□□□□ -1.8
ZNF561-216ENST00000483768 STARD3Q14849 445 aa3.78□□□□□ -1.8
ZNF561-216ENST00000483768 PGS1Q32NB8 556 aa3.78□□□□□ -1.8
ZNF561-216ENST00000483768 NBPF8Q3BBV2 869 aa3.78□□□□□ -1.8
ZNF561-216ENST00000483768 PLEKHN1Q494U1 663 aaPredicted RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms