RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 FAM84BQ96KN1 310 aaPredicted RBP12.59□□□□□ -0.39
VTI1A-205ENST00000483122 CAMKK2Q96RR4 588 aa12.59□□□□□ -0.39
VTI1A-205ENST00000483122 SPATA16Q9BXB7 569 aa12.59□□□□□ -0.39
VTI1A-205ENST00000483122 STK33Q9BYT3 514 aa12.59□□□□□ -0.39
VTI1A-205ENST00000483122 IKZF4Q9H2S9 585 aa12.59□□□□□ -0.39
VTI1A-205ENST00000483122 DNAJC18Q9H819 358 aa12.59□□□□□ -0.39
VTI1A-205ENST00000483122 LNPEPQ9UIQ6 1025 aa12.59□□□□□ -0.39
VTI1A-205ENST00000483122 WASF2Q9Y6W5 498 aa12.59□□□□□ -0.39
VTI1A-205ENST00000483122 A0A1W2PRG0 241 aa12.59□□□□□ -0.39
VTI1A-205ENST00000483122 POTEFA5A3E0 1075 aa12.59□□□□□ -0.39
VTI1A-205ENST00000483122 MARCH6O60337 910 aa12.59□□□□□ -0.39
VTI1A-205ENST00000483122 EXOC3O60645 756 aa12.59□□□□□ -0.39
VTI1A-205ENST00000483122 NR3C1P04150 777 aa12.59□□□□□ -0.39
VTI1A-205ENST00000483122 LYNP07948 512 aa12.59□□□□□ -0.39
VTI1A-205ENST00000483122 POTEIP0CG38 1075 aa12.59□□□□□ -0.39
VTI1A-205ENST00000483122 POTEJP0CG39 1038 aa12.59□□□□□ -0.39
VTI1A-205ENST00000483122 CYP19A1P11511 503 aaPredicted RBP12.59□□□□□ -0.39
VTI1A-205ENST00000483122 RTP1P59025 263 aa12.59□□□□□ -0.39
VTI1A-205ENST00000483122 EN1Q05925 392 aaPredicted RBP12.59□□□□□ -0.39
VTI1A-205ENST00000483122 C11orf63Q6NUN7 778 aa12.59□□□□□ -0.39
VTI1A-205ENST00000483122 POTEEQ6S8J3 1075 aa12.59□□□□□ -0.39
VTI1A-205ENST00000483122 SFR1Q86XK3 245 aa12.59□□□□□ -0.39
VTI1A-205ENST00000483122 SLC20A1Q8WUM9 679 aa12.59□□□□□ -0.39
VTI1A-205ENST00000483122 WDR60Q8WVS4 1066 aa12.59□□□□□ -0.39
VTI1A-205ENST00000483122 NCSTNQ92542 709 aa12.59□□□□□ -0.39
VTI1A-205ENST00000483122 BTBD6Q96KE9 485 aa12.59□□□□□ -0.39
VTI1A-205ENST00000483122 PLEKHG4BQ96PX9 1271 aa12.59□□□□□ -0.39
VTI1A-205ENST00000483122 MTUS1Q9ULD2 1270 aa12.59□□□□□ -0.39
VTI1A-205ENST00000483122 JAG2Q9Y219 1238 aa12.59□□□□□ -0.39
VTI1A-205ENST00000483122 ASTN1O14525 1302 aa12.58□□□□□ -0.4
VTI1A-205ENST00000483122 CNTNAP4Q9C0A0 1308 aa12.58□□□□□ -0.4
VTI1A-205ENST00000483122 CDH16O75309 829 aa12.58□□□□□ -0.4
VTI1A-205ENST00000483122 FGFR1P11362 822 aa12.58□□□□□ -0.4
VTI1A-205ENST00000483122 KLRK1P26718 216 aa12.58□□□□□ -0.4
VTI1A-205ENST00000483122 RFC4P35249 363 aa12.58□□□□□ -0.4
VTI1A-205ENST00000483122 UBE2SQ16763 222 aa12.58□□□□□ -0.4
VTI1A-205ENST00000483122 ARHGAP44Q17R89 818 aa12.58□□□□□ -0.4
VTI1A-205ENST00000483122 HYIQ5T013 277 aa12.58□□□□□ -0.4
VTI1A-205ENST00000483122 ANKRD35Q8N283 1001 aa12.58□□□□□ -0.4
VTI1A-205ENST00000483122 DENND1AQ8TEH3 1009 aa12.58□□□□□ -0.4
VTI1A-205ENST00000483122 TUBGCP5Q96RT8 1024 aa12.58□□□□□ -0.4
VTI1A-205ENST00000483122 VCX3BQ9H321 246 aa12.58□□□□□ -0.4
VTI1A-205ENST00000483122 METTL14Q9HCE5 456 aaKnown RBP12.58□□□□□ -0.4
VTI1A-205ENST00000483122 VCX3AQ9NNX9 186 aa12.58□□□□□ -0.4
VTI1A-205ENST00000483122 UBN1Q9NPG3 1134 aa12.58□□□□□ -0.4
VTI1A-205ENST00000483122 CCDC87Q9NVE4 849 aa12.58□□□□□ -0.4
VTI1A-205ENST00000483122 EURLQ9NYK6 297 aa12.58□□□□□ -0.4
VTI1A-205ENST00000483122 DDX25Q9UHL0 483 aaKnown RBP12.58□□□□□ -0.4
VTI1A-205ENST00000483122 SUGT1Q9Y2Z0 365 aa12.58□□□□□ -0.4
VTI1A-205ENST00000483122 GSC2O15499 205 aa12.58□□□□□ -0.4
VTI1A-205ENST00000483122 ATMINO43313 823 aaPredicted RBP12.58□□□□□ -0.4
VTI1A-205ENST00000483122 MAP3K7O43318 606 aa12.58□□□□□ -0.4
VTI1A-205ENST00000483122 CALUO43852 315 aaPredicted RBP12.58□□□□□ -0.4
VTI1A-205ENST00000483122 IVDP26440 423 aa12.58□□□□□ -0.4
VTI1A-205ENST00000483122 KCNA1Q09470 495 aa12.58□□□□□ -0.4
VTI1A-205ENST00000483122 PLEKHG4Q58EX7 1191 aa12.58□□□□□ -0.4
VTI1A-205ENST00000483122 CAVIN4Q5BKX8 364 aa12.58□□□□□ -0.4
VTI1A-205ENST00000483122 HS2ST1Q7LGA3 356 aa12.58□□□□□ -0.4
VTI1A-205ENST00000483122 OTOAQ7RTW8 1153 aa12.58□□□□□ -0.4
VTI1A-205ENST00000483122 RHOT2Q8IXI1 618 aa12.58□□□□□ -0.4
VTI1A-205ENST00000483122 ZNF444Q8N0Y2 327 aaPredicted RBP12.58□□□□□ -0.4
VTI1A-205ENST00000483122 PPFIBP2Q8ND30 876 aa12.58□□□□□ -0.4
VTI1A-205ENST00000483122 MAML1Q92585 1016 aa12.58□□□□□ -0.4
VTI1A-205ENST00000483122 C9orf72Q96LT7 481 aa12.58□□□□□ -0.4
VTI1A-205ENST00000483122 ZNF184Q99676 751 aaPredicted RBP12.58□□□□□ -0.4
VTI1A-205ENST00000483122 NPHS2Q9NP85 383 aa12.58□□□□□ -0.4
VTI1A-205ENST00000483122 LRRC4BQ9NT99 713 aa12.58□□□□□ -0.4
VTI1A-205ENST00000483122 ARL8BQ9NVJ2 186 aa12.58□□□□□ -0.4
VTI1A-205ENST00000483122 GALNT8Q9NY28 637 aa12.58□□□□□ -0.4
VTI1A-205ENST00000483122 PCDHA12Q9UN75 941 aa12.58□□□□□ -0.4
VTI1A-205ENST00000483122 ACTL7BQ9Y614 415 aa12.58□□□□□ -0.4
VTI1A-205ENST00000483122 ESYT2A0FGR8 921 aa12.57□□□□□ -0.4
VTI1A-205ENST00000483122 LRRN2O75325 713 aa12.57□□□□□ -0.4
VTI1A-205ENST00000483122 MUTP22033 750 aa12.57□□□□□ -0.4
VTI1A-205ENST00000483122 VPS41P49754 854 aa12.57□□□□□ -0.4
VTI1A-205ENST00000483122 ADCY7P51828 1080 aa12.57□□□□□ -0.4
VTI1A-205ENST00000483122 SLC12A3P55017 1021 aa12.57□□□□□ -0.4
VTI1A-205ENST00000483122 SLC45A4Q5BKX6 768 aa12.57□□□□□ -0.4
VTI1A-205ENST00000483122 CLNKQ7Z7G1 428 aa12.57□□□□□ -0.4
VTI1A-205ENST00000483122 C12orf50Q8NA57 414 aaPredicted RBP12.57□□□□□ -0.4
VTI1A-205ENST00000483122 LINC00116Q8NCU8 138 aa12.57□□□□□ -0.4
VTI1A-205ENST00000483122 SPIRE2Q8WWL2 714 aa12.57□□□□□ -0.4
VTI1A-205ENST00000483122 CD101Q93033 1021 aa12.57□□□□□ -0.4
VTI1A-205ENST00000483122 LRRC19Q9H756 370 aa12.57□□□□□ -0.4
VTI1A-205ENST00000483122 CYLDQ9NQC7 956 aa12.57□□□□□ -0.4
VTI1A-205ENST00000483122 KANSL3Q9P2N6 904 aa12.57□□□□□ -0.4
VTI1A-205ENST00000483122 MYH14Q7Z406 1995 aaKnown RBP12.57□□□□□ -0.4
VTI1A-205ENST00000483122 KDM3AQ9Y4C1 1321 aa12.57□□□□□ -0.4
VTI1A-205ENST00000483122 SCN7AQ01118 1682 aa12.57□□□□□ -0.4
VTI1A-205ENST00000483122 GTPBP10A4D1E9 387 aaKnown RBP12.57□□□□□ -0.4
VTI1A-205ENST00000483122 ERVV-1B6SEH8 477 aa12.57□□□□□ -0.4
VTI1A-205ENST00000483122 PDXKO00764 312 aa12.57□□□□□ -0.4
VTI1A-205ENST00000483122 CLDN3O15551 220 aa12.57□□□□□ -0.4
VTI1A-205ENST00000483122 MED24O75448 989 aa12.57□□□□□ -0.4
VTI1A-205ENST00000483122 FTLP02792 175 aaPredicted RBP12.57□□□□□ -0.4
VTI1A-205ENST00000483122 ITIH2P19823 946 aa12.57□□□□□ -0.4
VTI1A-205ENST00000483122 STAT3P40763 770 aa12.57□□□□□ -0.4
VTI1A-205ENST00000483122 HADHBP55084 474 aaKnown RBP12.57□□□□□ -0.4
VTI1A-205ENST00000483122 INHBCP55103 352 aa12.57□□□□□ -0.4
VTI1A-205ENST00000483122 SPARCL1Q14515 664 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms