RNA–Protein interactions for RNA: ENST00000482614.5

EXOSC3-205, Transcript of exosome component 3, humanhuman

TSL 5

Gene EXOSC3, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-205ENST00000482614 CACNB1Q02641 598 aaPredicted RBP16.82■□□□□ 0.28
EXOSC3-205ENST00000482614 CREMQ03060 361 aa16.82■□□□□ 0.28
EXOSC3-205ENST00000482614 ELAVL2Q12926 359 aaKnown RBP16.82■□□□□ 0.28
EXOSC3-205ENST00000482614 MCM6Q14566 821 aa16.82■□□□□ 0.28
EXOSC3-205ENST00000482614 FAM173BQ6P4H8 233 aa16.82■□□□□ 0.28
EXOSC3-205ENST00000482614 ZPBP2Q6X784 338 aa16.82■□□□□ 0.28
EXOSC3-205ENST00000482614 ZBTB33Q86T24 672 aa16.82■□□□□ 0.28
EXOSC3-205ENST00000482614 CEP120Q8N960 986 aa16.82■□□□□ 0.28
EXOSC3-205ENST00000482614 LARP4BQ92615 738 aaKnown RBP16.82■□□□□ 0.28
EXOSC3-205ENST00000482614 KCNN1Q92952 543 aa16.82■□□□□ 0.28
EXOSC3-205ENST00000482614 UROC1Q96N76 676 aa16.82■□□□□ 0.28
EXOSC3-205ENST00000482614 ACAP3Q96P50 834 aa16.82■□□□□ 0.28
EXOSC3-205ENST00000482614 PPP1R10Q96QC0 940 aaKnown RBP16.82■□□□□ 0.28
EXOSC3-205ENST00000482614 REEP2Q9BRK0 252 aa16.82■□□□□ 0.28
EXOSC3-205ENST00000482614 POMKQ9H5K3 350 aa16.82■□□□□ 0.28
EXOSC3-205ENST00000482614 CACNG4Q9UBN1 327 aa16.82■□□□□ 0.28
EXOSC3-205ENST00000482614 CCDC39Q9UFE4 941 aa16.82■□□□□ 0.28
EXOSC3-205ENST00000482614 ABLIM1O14639 778 aa16.81■□□□□ 0.28
EXOSC3-205ENST00000482614 TOM1L1O75674 476 aa16.81■□□□□ 0.28
EXOSC3-205ENST00000482614 FAM13AO94988 1023 aa16.81■□□□□ 0.28
EXOSC3-205ENST00000482614 KIF4AO95239 1232 aa16.81■□□□□ 0.28
EXOSC3-205ENST00000482614 GLUD1P00367 558 aa16.81■□□□□ 0.28
EXOSC3-205ENST00000482614 DDIT3P35638 169 aa16.81■□□□□ 0.28
EXOSC3-205ENST00000482614 OSTNP61366 133 aa16.81■□□□□ 0.28
EXOSC3-205ENST00000482614 XKR4Q5GH76 650 aa16.81■□□□□ 0.28
EXOSC3-205ENST00000482614 GLRA4Q5JXX5 417 aa16.81■□□□□ 0.28
EXOSC3-205ENST00000482614 ALKAL1Q6UXT8 129 aa16.81■□□□□ 0.28
EXOSC3-205ENST00000482614 TMC5Q6UXY8 1006 aa16.81■□□□□ 0.28
EXOSC3-205ENST00000482614 HAUS6Q7Z4H7 955 aa16.81■□□□□ 0.28
EXOSC3-205ENST00000482614 GPR149Q86SP6 731 aa16.81■□□□□ 0.28
EXOSC3-205ENST00000482614 MYCT1Q8N699 235 aa16.81■□□□□ 0.28
EXOSC3-205ENST00000482614 LRRC15Q8TF66 581 aa16.81■□□□□ 0.28
EXOSC3-205ENST00000482614 HDAC7Q8WUI4 952 aa16.81■□□□□ 0.28
EXOSC3-205ENST00000482614 RIN2Q8WYP3 895 aaPredicted RBP16.81■□□□□ 0.28
EXOSC3-205ENST00000482614 B3GALT6Q96L58 329 aa16.81■□□□□ 0.28
EXOSC3-205ENST00000482614 PARVGQ9HBI0 331 aa16.81■□□□□ 0.28
EXOSC3-205ENST00000482614 CDH22Q9UJ99 828 aa16.81■□□□□ 0.28
EXOSC3-205ENST00000482614 FBXO2Q9UK22 296 aaPredicted RBP16.81■□□□□ 0.28
EXOSC3-205ENST00000482614 MORC2Q9Y6X9 1032 aaPredicted RBP16.81■□□□□ 0.28
EXOSC3-205ENST00000482614 CITO14578 2027 aa16.8■□□□□ 0.28
EXOSC3-205ENST00000482614 PLXNA3P51805 1871 aa16.8■□□□□ 0.28
EXOSC3-205ENST00000482614 SMIM28A0A1B0GU29 152 aa16.8■□□□□ 0.28
EXOSC3-205ENST00000482614 TMEM189-UBE2V1I3L0A0 370 aa16.8■□□□□ 0.28
EXOSC3-205ENST00000482614 WEE2P0C1S8 567 aa16.8■□□□□ 0.28
EXOSC3-205ENST00000482614 TXLNAP40222 546 aa16.8■□□□□ 0.28
EXOSC3-205ENST00000482614 CEBPZQ03701 1054 aaKnown RBP16.8■□□□□ 0.28
EXOSC3-205ENST00000482614 SPECC1Q5M775 1068 aa16.8■□□□□ 0.28
EXOSC3-205ENST00000482614 FAM171A1Q5VUB5 890 aa16.8■□□□□ 0.28
EXOSC3-205ENST00000482614 KANK3Q6NY19 840 aa16.8■□□□□ 0.28
EXOSC3-205ENST00000482614 DCLRE1AQ6PJP8 1040 aa16.8■□□□□ 0.28
EXOSC3-205ENST00000482614 CMASQ8NFW8 434 aaPredicted RBP16.8■□□□□ 0.28
EXOSC3-205ENST00000482614 HASPINQ8TF76 798 aa16.8■□□□□ 0.28
EXOSC3-205ENST00000482614 EPSTI1Q96J88 318 aa16.8■□□□□ 0.28
EXOSC3-205ENST00000482614 ZBTB45Q96K62 511 aaPredicted RBP16.8■□□□□ 0.28
EXOSC3-205ENST00000482614 TTPALQ9BTX7 342 aa16.8■□□□□ 0.28
EXOSC3-205ENST00000482614 MAN1C1Q9NR34 630 aa16.8■□□□□ 0.28
EXOSC3-205ENST00000482614 SLC38A7Q9NVC3 462 aa16.8■□□□□ 0.28
EXOSC3-205ENST00000482614 GTF3C3Q9Y5Q9 886 aa16.8■□□□□ 0.28
EXOSC3-205ENST00000482614 MTCL1Q9Y4B5 1905 aaKnown RBP16.8■□□□□ 0.28
EXOSC3-205ENST00000482614 CLDN3O15551 220 aa16.79■□□□□ 0.28
EXOSC3-205ENST00000482614 HARSP12081 509 aaKnown RBP16.79■□□□□ 0.28
EXOSC3-205ENST00000482614 ABCD1P33897 745 aa16.79■□□□□ 0.28
EXOSC3-205ENST00000482614 ZNF131P52739 623 aa16.79■□□□□ 0.28
EXOSC3-205ENST00000482614 NOLC1Q14978 699 aaKnown RBP eCLIP16.79■□□□□ 0.28
EXOSC3-205ENST00000482614 SLC39A14Q15043 492 aa16.79■□□□□ 0.28
EXOSC3-205ENST00000482614 RTP2Q5QGT7 225 aa16.79■□□□□ 0.28
EXOSC3-205ENST00000482614 PDXDC1Q6P996 788 aa16.79■□□□□ 0.28
EXOSC3-205ENST00000482614 CYP26C1Q6V0L0 522 aa16.79■□□□□ 0.28
EXOSC3-205ENST00000482614 C15orf39Q6ZRI6 1047 aa16.79■□□□□ 0.28
EXOSC3-205ENST00000482614 USP49Q70CQ1 688 aa16.79■□□□□ 0.28
EXOSC3-205ENST00000482614 CEP57Q86XR8 500 aa16.79■□□□□ 0.28
EXOSC3-205ENST00000482614 HSCBQ8IWL3 235 aa16.79■□□□□ 0.28
EXOSC3-205ENST00000482614 PIK3R5Q8WYR1 880 aa16.79■□□□□ 0.28
EXOSC3-205ENST00000482614 EDAQ92838 391 aa16.79■□□□□ 0.28
EXOSC3-205ENST00000482614 BICD1Q96G01 975 aa16.79■□□□□ 0.28
EXOSC3-205ENST00000482614 DDX27Q96GQ7 796 aaKnown RBP16.79■□□□□ 0.28
EXOSC3-205ENST00000482614 SNX27Q96L92 541 aa16.79■□□□□ 0.28
EXOSC3-205ENST00000482614 USP28Q96RU2 1077 aa16.79■□□□□ 0.28
EXOSC3-205ENST00000482614 PLEKHA4Q9H4M7 779 aa16.79■□□□□ 0.28
EXOSC3-205ENST00000482614 TSHZ2Q9NRE2 1034 aa16.79■□□□□ 0.28
EXOSC3-205ENST00000482614 ANKFY1Q9P2R3 1169 aa16.79■□□□□ 0.28
EXOSC3-205ENST00000482614 STK17AQ9UEE5 414 aa16.79■□□□□ 0.28
EXOSC3-205ENST00000482614 TRAPPC3O43617 180 aa16.78■□□□□ 0.28
EXOSC3-205ENST00000482614 TRAK2O60296 914 aa16.78■□□□□ 0.28
EXOSC3-205ENST00000482614 TBCAO75347 108 aaKnown RBP16.78■□□□□ 0.28
EXOSC3-205ENST00000482614 B3GAT3O94766 335 aa16.78■□□□□ 0.28
EXOSC3-205ENST00000482614 PDIA4P13667 645 aaKnown RBP16.78■□□□□ 0.28
EXOSC3-205ENST00000482614 KCNE1P15382 129 aa16.78■□□□□ 0.28
EXOSC3-205ENST00000482614 SP100P23497 879 aaPredicted RBP16.78■□□□□ 0.28
EXOSC3-205ENST00000482614 MATR3P43243 847 aaKnown RBP eCLIP16.78■□□□□ 0.28
EXOSC3-205ENST00000482614 CLCNKBP51801 687 aa16.78■□□□□ 0.28
EXOSC3-205ENST00000482614 MCL1Q07820 350 aa16.78■□□□□ 0.28
EXOSC3-205ENST00000482614 UPP1Q16831 310 aa16.78■□□□□ 0.28
EXOSC3-205ENST00000482614 RRAGBQ5VZM2 374 aa16.78■□□□□ 0.28
EXOSC3-205ENST00000482614 PRSS55Q6UWB4 352 aaPredicted RBP16.78■□□□□ 0.28
EXOSC3-205ENST00000482614 PALB2Q86YC2 1186 aa16.78■□□□□ 0.28
EXOSC3-205ENST00000482614 KRI1Q8N9T8 703 aaKnown RBP16.78■□□□□ 0.28
EXOSC3-205ENST00000482614 CLIC6Q96NY7 704 aa16.78■□□□□ 0.28
EXOSC3-205ENST00000482614 ZHX3Q9H4I2 956 aa16.78■□□□□ 0.28
EXOSC3-205ENST00000482614 CNTN3Q9P232 1028 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms