RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 ADAM17P78536 824 aa7.71□□□□□ -1.18
CLK1-212ENST00000482590 PURAQ00577 322 aaKnown RBP7.71□□□□□ -1.18
CLK1-212ENST00000482590 SIM2Q14190 667 aaPredicted RBP7.71□□□□□ -1.18
CLK1-212ENST00000482590 MLC1Q15049 377 aa7.71□□□□□ -1.18
CLK1-212ENST00000482590 DPY19L1Q2PZI1 675 aa7.71□□□□□ -1.18
CLK1-212ENST00000482590 FAM83BQ5T0W9 1011 aa7.71□□□□□ -1.18
CLK1-212ENST00000482590 FAM102BQ5T8I3 360 aa7.71□□□□□ -1.18
CLK1-212ENST00000482590 CCDC70Q6NSX1 233 aa7.71□□□□□ -1.18
CLK1-212ENST00000482590 RNF180Q86T96 592 aa7.71□□□□□ -1.18
CLK1-212ENST00000482590 DGKHQ86XP1 1220 aa7.71□□□□□ -1.18
CLK1-212ENST00000482590 CPNE8Q86YQ8 564 aa7.71□□□□□ -1.18
CLK1-212ENST00000482590 FAM169BQ8N8A8 192 aa7.71□□□□□ -1.18
CLK1-212ENST00000482590 ZBTB8AQ96BR9 441 aa7.71□□□□□ -1.18
CLK1-212ENST00000482590 PUS3Q9BZE2 481 aaKnown RBP7.71□□□□□ -1.18
CLK1-212ENST00000482590 BICC1Q9H694 974 aaKnown RBP7.71□□□□□ -1.18
CLK1-212ENST00000482590 AS3MTQ9HBK9 375 aa7.71□□□□□ -1.18
CLK1-212ENST00000482590 GOLGA6AQ9NYA3 693 aa7.71□□□□□ -1.18
CLK1-212ENST00000482590 PHIPQ8WWQ0 1821 aa7.71□□□□□ -1.18
CLK1-212ENST00000482590 RPAP1Q9BWH6 1393 aaPredicted RBP7.71□□□□□ -1.18
CLK1-212ENST00000482590 BRCA2P51587 3418 aa7.7□□□□□ -1.18
CLK1-212ENST00000482590 C2orf71A6NGG8 1288 aa7.7□□□□□ -1.18
CLK1-212ENST00000482590 F2P00734 622 aa7.7□□□□□ -1.18
CLK1-212ENST00000482590 PTMAP06454 111 aaKnown RBP7.7□□□□□ -1.18
CLK1-212ENST00000482590 IFIT2P09913 472 aaKnown RBP7.7□□□□□ -1.18
CLK1-212ENST00000482590 IFIT1P09914 478 aaKnown RBP7.7□□□□□ -1.18
CLK1-212ENST00000482590 CASP2P42575 452 aa7.7□□□□□ -1.18
CLK1-212ENST00000482590 SEPHS1P49903 392 aa7.7□□□□□ -1.18
CLK1-212ENST00000482590 CRHR2Q13324 411 aa7.7□□□□□ -1.18
CLK1-212ENST00000482590 PIN1Q13526 163 aaPredicted RBP7.7□□□□□ -1.18
CLK1-212ENST00000482590 C21orf62-AS1Q17RA5 79 aa7.7□□□□□ -1.18
CLK1-212ENST00000482590 GNPTABQ3T906 1256 aa7.7□□□□□ -1.18
CLK1-212ENST00000482590 RABL6Q3YEC7 729 aaPredicted RBP7.7□□□□□ -1.18
CLK1-212ENST00000482590 ALFQ53S48 1182 aa7.7□□□□□ -1.18
CLK1-212ENST00000482590 CCDC81Q6ZN84 652 aa7.7□□□□□ -1.18
CLK1-212ENST00000482590 OTOP1Q7RTM1 612 aa7.7□□□□□ -1.18
CLK1-212ENST00000482590 LINC00482Q8N8I6 264 aa7.7□□□□□ -1.18
CLK1-212ENST00000482590 CD99L2Q8TCZ2 262 aa7.7□□□□□ -1.18
CLK1-212ENST00000482590 TEKT1Q969V4 418 aa7.7□□□□□ -1.18
CLK1-212ENST00000482590 OPTNQ96CV9 577 aa7.7□□□□□ -1.18
CLK1-212ENST00000482590 FAM84BQ96KN1 310 aaPredicted RBP7.7□□□□□ -1.18
CLK1-212ENST00000482590 R3HDMLQ9H3Y0 253 aa7.7□□□□□ -1.18
CLK1-212ENST00000482590 SMPD4Q9NXE4 827 aa7.7□□□□□ -1.18
CLK1-212ENST00000482590 PCDHB10Q9UN67 800 aa7.7□□□□□ -1.18
CLK1-212ENST00000482590 BACE2Q9Y5Z0 518 aa7.7□□□□□ -1.18
CLK1-212ENST00000482590 UTYO14607 1347 aa7.7□□□□□ -1.18
CLK1-212ENST00000482590 FOCADQ5VW36 1801 aa7.69□□□□□ -1.18
CLK1-212ENST00000482590 CEP290O15078 2479 aa7.69□□□□□ -1.18
CLK1-212ENST00000482590 CCL15-CCL14A0A0B4J2E2 113 aa7.69□□□□□ -1.18
CLK1-212ENST00000482590 KATNA1O75449 491 aa7.69□□□□□ -1.18
CLK1-212ENST00000482590 PDE8BO95263 885 aa7.69□□□□□ -1.18
CLK1-212ENST00000482590 EPHX1P07099 455 aa7.69□□□□□ -1.18
CLK1-212ENST00000482590 HTR3AP46098 478 aa7.69□□□□□ -1.18
CLK1-212ENST00000482590 GTF2A2P52657 109 aa7.69□□□□□ -1.18
CLK1-212ENST00000482590 SP3Q02447 781 aa7.69□□□□□ -1.18
CLK1-212ENST00000482590 SMAD4Q13485 552 aaKnown RBP7.69□□□□□ -1.18
CLK1-212ENST00000482590 VGLL4Q14135 290 aa7.69□□□□□ -1.18
CLK1-212ENST00000482590 ARHGEF6Q15052 776 aa7.69□□□□□ -1.18
CLK1-212ENST00000482590 PUM3Q15397 648 aaKnown RBP7.69□□□□□ -1.18
CLK1-212ENST00000482590 CCL15Q16663 113 aa7.69□□□□□ -1.18
CLK1-212ENST00000482590 GFOD2Q3B7J2 385 aa7.69□□□□□ -1.18
CLK1-212ENST00000482590 LRRC24Q50LG9 513 aa7.69□□□□□ -1.18
CLK1-212ENST00000482590 HEATR6Q6AI08 1181 aaKnown RBP7.69□□□□□ -1.18
CLK1-212ENST00000482590 WWC2Q6AWC2 1192 aa7.69□□□□□ -1.18
CLK1-212ENST00000482590 SMAP1Q8IYB5 467 aaPredicted RBP7.69□□□□□ -1.18
CLK1-212ENST00000482590 AFAP1L2Q8N4X5 818 aa7.69□□□□□ -1.18
CLK1-212ENST00000482590 ATL2Q8NHH9 583 aa7.69□□□□□ -1.18
CLK1-212ENST00000482590 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.69□□□□□ -1.18
CLK1-212ENST00000482590 ADAMTS17Q8TE56 1095 aa7.69□□□□□ -1.18
CLK1-212ENST00000482590 HOOK2Q96ED9 719 aa7.69□□□□□ -1.18
CLK1-212ENST00000482590 DDX11Q96FC9 970 aa7.69□□□□□ -1.18
CLK1-212ENST00000482590 KAZALD1Q96I82 304 aa7.69□□□□□ -1.18
CLK1-212ENST00000482590 FGD4Q96M96 766 aa7.69□□□□□ -1.18
CLK1-212ENST00000482590 TMEM39BQ9GZU3 492 aa7.69□□□□□ -1.18
CLK1-212ENST00000482590 GBP3Q9H0R5 595 aa7.69□□□□□ -1.18
CLK1-212ENST00000482590 CGGBP1Q9UFW8 167 aaPredicted RBP7.69□□□□□ -1.18
CLK1-212ENST00000482590 PTPN22Q9Y2R2 807 aa7.69□□□□□ -1.18
CLK1-212ENST00000482590 MYO5AQ9Y4I1 1855 aaKnown RBP7.68□□□□□ -1.18
CLK1-212ENST00000482590 TCEA3O75764 348 aa7.68□□□□□ -1.18
CLK1-212ENST00000482590 C8BP07358 591 aa7.68□□□□□ -1.18
CLK1-212ENST00000482590 VDRP11473 427 aa7.68□□□□□ -1.18
CLK1-212ENST00000482590 SLC5A1P13866 664 aa7.68□□□□□ -1.18
CLK1-212ENST00000482590 TNFRSF1AP19438 455 aa7.68□□□□□ -1.18
CLK1-212ENST00000482590 CACNB3P54284 484 aa7.68□□□□□ -1.18
CLK1-212ENST00000482590 FXNQ16595 210 aa7.68□□□□□ -1.18
CLK1-212ENST00000482590 ADAT2Q7Z6V5 191 aaKnown RBP7.68□□□□□ -1.18
CLK1-212ENST00000482590 ARHGEF39Q8N4T4 335 aa7.68□□□□□ -1.18
CLK1-212ENST00000482590 MAGEB6Q8N7X4 407 aa7.68□□□□□ -1.18
CLK1-212ENST00000482590 ANKRD44Q8N8A2 993 aa7.68□□□□□ -1.18
CLK1-212ENST00000482590 ZSWIM2Q8NEG5 633 aa7.68□□□□□ -1.18
CLK1-212ENST00000482590 ZNF669Q96BR6 464 aaPredicted RBP7.68□□□□□ -1.18
CLK1-212ENST00000482590 GCC1Q96CN9 775 aa7.68□□□□□ -1.18
CLK1-212ENST00000482590 WRNIP1Q96S55 665 aa7.68□□□□□ -1.18
CLK1-212ENST00000482590 GORASP1Q9BQQ3 440 aa7.68□□□□□ -1.18
CLK1-212ENST00000482590 KRTAP3-1Q9BYR8 98 aa7.68□□□□□ -1.18
CLK1-212ENST00000482590 MAPRE3Q9UPY8 281 aa7.68□□□□□ -1.18
CLK1-212ENST00000482590 SIT1Q9Y3P8 196 aa7.68□□□□□ -1.18
CLK1-212ENST00000482590 ZNF521Q96K83 1311 aa7.68□□□□□ -1.18
CLK1-212ENST00000482590 KIF16BQ96L93 1317 aa7.68□□□□□ -1.18
CLK1-212ENST00000482590 MYH8P13535 1937 aa7.68□□□□□ -1.18
CLK1-212ENST00000482590 LOC285556D6RIA3 1793 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms