RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 TRIM49CP0CI26 452 aa10.02□□□□□ -0.8
GARNL3-216ENST00000481242 TGFB3P10600 412 aa10.02□□□□□ -0.8
GARNL3-216ENST00000481242 CXCL9Q07325 125 aa10.02□□□□□ -0.8
GARNL3-216ENST00000481242 PDXDC1Q6P996 788 aa10.02□□□□□ -0.8
GARNL3-216ENST00000481242 SYDE1Q6ZW31 735 aaPredicted RBP10.02□□□□□ -0.8
GARNL3-216ENST00000481242 FRA10AC1Q70Z53 315 aa10.02□□□□□ -0.8
GARNL3-216ENST00000481242 SRLQ86TD4 932 aa10.02□□□□□ -0.8
GARNL3-216ENST00000481242 TMEM143Q96AN5 459 aa10.02□□□□□ -0.8
GARNL3-216ENST00000481242 CCDC124Q96CT7 223 aaKnown RBP10.02□□□□□ -0.8
GARNL3-216ENST00000481242 DDX27Q96GQ7 796 aaKnown RBP10.02□□□□□ -0.8
GARNL3-216ENST00000481242 REEP2Q9BRK0 252 aa10.02□□□□□ -0.8
GARNL3-216ENST00000481242 COLEC11Q9BWP8 271 aa10.02□□□□□ -0.8
GARNL3-216ENST00000481242 DRC3Q9H069 523 aa10.02□□□□□ -0.8
GARNL3-216ENST00000481242 CHCHD3Q9NX63 227 aaKnown RBP10.02□□□□□ -0.8
GARNL3-216ENST00000481242 PSD3Q9NYI0 1048 aa10.02□□□□□ -0.8
GARNL3-216ENST00000481242 DPP7Q9UHL4 492 aa10.02□□□□□ -0.8
GARNL3-216ENST00000481242 PPP1R9AQ9ULJ8 1098 aa10.02□□□□□ -0.8
GARNL3-216ENST00000481242 PCDHB2Q9Y5E7 798 aa10.02□□□□□ -0.8
GARNL3-216ENST00000481242 ZNF197O14709 1029 aa10.02□□□□□ -0.81
GARNL3-216ENST00000481242 SNX2O60749 519 aa10.02□□□□□ -0.81
GARNL3-216ENST00000481242 GRIK1P39086 918 aa10.02□□□□□ -0.81
GARNL3-216ENST00000481242 PRAMEP78395 509 aa10.02□□□□□ -0.81
GARNL3-216ENST00000481242 E2F4Q16254 413 aa10.02□□□□□ -0.81
GARNL3-216ENST00000481242 EFCAB12Q6NXP0 572 aa10.02□□□□□ -0.81
GARNL3-216ENST00000481242 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.02□□□□□ -0.81
GARNL3-216ENST00000481242 KRT35Q92764 455 aa10.02□□□□□ -0.81
GARNL3-216ENST00000481242 SLITRK1Q96PX8 696 aa10.02□□□□□ -0.81
GARNL3-216ENST00000481242 SERPINI1Q99574 410 aa10.02□□□□□ -0.81
GARNL3-216ENST00000481242 FGFR1OP2Q9NVK5 253 aa10.02□□□□□ -0.81
GARNL3-216ENST00000481242 POLLQ9UGP5 575 aa10.02□□□□□ -0.81
GARNL3-216ENST00000481242 TNS2Q63HR2 1409 aa10.02□□□□□ -0.81
GARNL3-216ENST00000481242 IQGAP1P46940 1657 aa10.02□□□□□ -0.81
GARNL3-216ENST00000481242 PREX1Q8TCU6 1659 aa10.02□□□□□ -0.81
GARNL3-216ENST00000481242 C17orf102A2RUQ5 167 aa10.02□□□□□ -0.81
GARNL3-216ENST00000481242 SMAPO00193 183 aa10.02□□□□□ -0.81
GARNL3-216ENST00000481242 GUCY1A2P33402 732 aa10.02□□□□□ -0.81
GARNL3-216ENST00000481242 ROR1Q01973 937 aa10.02□□□□□ -0.81
GARNL3-216ENST00000481242 DNERQ8NFT8 737 aa10.02□□□□□ -0.81
GARNL3-216ENST00000481242 CFAP36Q96G28 342 aa10.02□□□□□ -0.81
GARNL3-216ENST00000481242 KIAA1257Q9ULG3 409 aa10.02□□□□□ -0.81
GARNL3-216ENST00000481242 TTC26A0AVF1 554 aa10.02□□□□□ -0.81
GARNL3-216ENST00000481242 COPEO14579 308 aa10.02□□□□□ -0.81
GARNL3-216ENST00000481242 ZBTB22O15209 634 aa10.02□□□□□ -0.81
GARNL3-216ENST00000481242 EXTL3O43909 919 aa10.02□□□□□ -0.81
GARNL3-216ENST00000481242 FMO5P49326 533 aa10.02□□□□□ -0.81
GARNL3-216ENST00000481242 OAZ1P54368 228 aa10.02□□□□□ -0.81
GARNL3-216ENST00000481242 SMIM5Q71RC9 77 aa10.02□□□□□ -0.81
GARNL3-216ENST00000481242 ANKRD7Q92527 254 aa10.02□□□□□ -0.81
GARNL3-216ENST00000481242 OSBPL9Q96SU4 736 aa10.02□□□□□ -0.81
GARNL3-216ENST00000481242 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.02□□□□□ -0.81
GARNL3-216ENST00000481242 PLEKHA5Q9HAU0 1116 aa10.02□□□□□ -0.81
GARNL3-216ENST00000481242 TMEM8AQ9HCN3 771 aa10.02□□□□□ -0.81
GARNL3-216ENST00000481242 BAIAP2L1Q9UHR4 511 aa10.02□□□□□ -0.81
GARNL3-216ENST00000481242 ORC6Q9Y5N6 252 aa10.02□□□□□ -0.81
GARNL3-216ENST00000481242 MTSS1O43312 755 aa10.01□□□□□ -0.81
GARNL3-216ENST00000481242 FGFR2P21802 821 aa10.01□□□□□ -0.81
GARNL3-216ENST00000481242 SFSWAPQ12872 951 aaKnown RBP10.01□□□□□ -0.81
GARNL3-216ENST00000481242 DHX34Q14147 1143 aaKnown RBP10.01□□□□□ -0.81
GARNL3-216ENST00000481242 PIGHQ14442 188 aaPredicted RBP10.01□□□□□ -0.81
GARNL3-216ENST00000481242 SPARCL1Q14515 664 aa10.01□□□□□ -0.81
GARNL3-216ENST00000481242 DCLK2Q8N568 766 aa10.01□□□□□ -0.81
GARNL3-216ENST00000481242 GIPC2Q8TF65 315 aa10.01□□□□□ -0.81
GARNL3-216ENST00000481242 SAYSD1Q9NPB0 183 aa10.01□□□□□ -0.81
GARNL3-216ENST00000481242 UBE2Q2LH0YL09 131 aa10.01□□□□□ -0.81
GARNL3-216ENST00000481242 CTSHP09668 335 aa10.01□□□□□ -0.81
GARNL3-216ENST00000481242 HOXA10P31260 410 aaPredicted RBP10.01□□□□□ -0.81
GARNL3-216ENST00000481242 CDH6P55285 790 aa10.01□□□□□ -0.81
GARNL3-216ENST00000481242 CASP8Q14790 479 aa10.01□□□□□ -0.81
GARNL3-216ENST00000481242 EFHC1Q5JVL4 640 aa10.01□□□□□ -0.81
GARNL3-216ENST00000481242 GPC2Q8N158 579 aa10.01□□□□□ -0.81
GARNL3-216ENST00000481242 PDCD6IPQ8WUM4 868 aaKnown RBP10.01□□□□□ -0.81
GARNL3-216ENST00000481242 TMEM169Q96HH4 297 aa10.01□□□□□ -0.81
GARNL3-216ENST00000481242 PCSK1NQ9UHG2 260 aa10.01□□□□□ -0.81
GARNL3-216ENST00000481242 PRRG1O14668 218 aa10.01□□□□□ -0.81
GARNL3-216ENST00000481242 TOM1L1O75674 476 aa10.01□□□□□ -0.81
GARNL3-216ENST00000481242 PNMA6AP0CW24 399 aaPredicted RBP10.01□□□□□ -0.81
GARNL3-216ENST00000481242 IFNAR2P48551 515 aa10.01□□□□□ -0.81
GARNL3-216ENST00000481242 INHBEP58166 350 aa10.01□□□□□ -0.81
GARNL3-216ENST00000481242 TPI1P60174 286 aa10.01□□□□□ -0.81
GARNL3-216ENST00000481242 FBXO38Q6PIJ6 1188 aa10.01□□□□□ -0.81
GARNL3-216ENST00000481242 C4orf22Q6V702 233 aa10.01□□□□□ -0.81
GARNL3-216ENST00000481242 CRLF3Q8IUI8 442 aa10.01□□□□□ -0.81
GARNL3-216ENST00000481242 RCOR2Q8IZ40 523 aa10.01□□□□□ -0.81
GARNL3-216ENST00000481242 ATP11CQ8NB49 1132 aa10.01□□□□□ -0.81
GARNL3-216ENST00000481242 NIF3L1Q9GZT8 377 aa10.01□□□□□ -0.81
GARNL3-216ENST00000481242 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.01□□□□□ -0.81
GARNL3-216ENST00000481242 SMIM24O75264 130 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 SLC2A3P11169 496 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 TAF6P49848 677 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 ACTR2P61160 394 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 C2orf54Q08AI8 447 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 ACCSLQ4AC99 568 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 ANKRD40Q6AI12 368 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 GLYCTKQ8IVS8 523 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 RUBCNQ92622 972 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 ULK4Q96C45 1275 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 AGBL1Q96MI9 1066 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 AP1M1Q9BXS5 423 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 KIAA1683Q9H0B3 1180 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 MOSPD1Q9UJG1 213 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms