RNA–Protein interactions for RNA: ENST00000481004.1

LINC02040-201, Transcript of long intergenic non-protein coding RNA 2040, humanhuman

TSL 5 BASIC

Gene LINC02040, Length 556 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02040-201ENST00000481004 PDIA3P30101 505 aaKnown RBP6.32□□□□□ -1.4
LINC02040-201ENST00000481004 THPOP40225 353 aa6.32□□□□□ -1.4
LINC02040-201ENST00000481004 METAP2P50579 478 aaKnown RBP eCLIP6.32□□□□□ -1.4
LINC02040-201ENST00000481004 ADCY7P51828 1080 aa6.32□□□□□ -1.4
LINC02040-201ENST00000481004 RCAN1P53805 252 aa6.32□□□□□ -1.4
LINC02040-201ENST00000481004 ID3Q02535 119 aa6.32□□□□□ -1.4
LINC02040-201ENST00000481004 MGAT3Q09327 533 aa6.32□□□□□ -1.4
LINC02040-201ENST00000481004 NEDD9Q14511 834 aa6.32□□□□□ -1.4
LINC02040-201ENST00000481004 NPY5RQ15761 445 aa6.32□□□□□ -1.4
LINC02040-201ENST00000481004 CCDC85BQ15834 202 aaPredicted RBP6.32□□□□□ -1.4
LINC02040-201ENST00000481004 PLEKHG4Q58EX7 1191 aa6.32□□□□□ -1.4
LINC02040-201ENST00000481004 JAKMIP3Q5VZ66 844 aa6.32□□□□□ -1.4
LINC02040-201ENST00000481004 CNKSR3Q6P9H4 555 aa6.32□□□□□ -1.4
LINC02040-201ENST00000481004 PDZD3Q86UT5 571 aa6.32□□□□□ -1.4
LINC02040-201ENST00000481004 DBF4BQ8NFT6 615 aa6.32□□□□□ -1.4
LINC02040-201ENST00000481004 TRAPPC12Q8WVT3 735 aa6.32□□□□□ -1.4
LINC02040-201ENST00000481004 LINC01599Q8WXQ3 324 aa6.32□□□□□ -1.4
LINC02040-201ENST00000481004 CUL5Q93034 780 aa6.32□□□□□ -1.4
LINC02040-201ENST00000481004 ATP6V0A1Q93050 837 aa6.32□□□□□ -1.4
LINC02040-201ENST00000481004 AIFM3Q96NN9 605 aa6.32□□□□□ -1.4
LINC02040-201ENST00000481004 MXRA8Q9BRK3 442 aa6.32□□□□□ -1.4
LINC02040-201ENST00000481004 ANO3Q9BYT9 981 aa6.32□□□□□ -1.4
LINC02040-201ENST00000481004 UPF3BQ9BZI7 483 aaKnown RBP6.32□□□□□ -1.4
LINC02040-201ENST00000481004 FTOQ9C0B1 505 aaKnown RBP eCLIP6.32□□□□□ -1.4
LINC02040-201ENST00000481004 AGO4Q9HCK5 861 aaKnown RBP6.32□□□□□ -1.4
LINC02040-201ENST00000481004 RBM28Q9NW13 759 aaKnown RBP6.32□□□□□ -1.4
LINC02040-201ENST00000481004 PARP2Q9UGN5 583 aa6.32□□□□□ -1.4
LINC02040-201ENST00000481004 RALGAPA2Q2PPJ7 1873 aa6.32□□□□□ -1.4
LINC02040-201ENST00000481004 EVPLQ92817 2033 aa6.32□□□□□ -1.4
LINC02040-201ENST00000481004 TCF20Q9UGU0 1960 aaKnown RBP6.31□□□□□ -1.4
LINC02040-201ENST00000481004 BRWD1Q9NSI6 2320 aa6.31□□□□□ -1.4
LINC02040-201ENST00000481004 IGKV6D-21A0A0A0MT36 114 aa6.31□□□□□ -1.4
LINC02040-201ENST00000481004 MBLAC1A4D2B0 266 aaPredicted RBP6.31□□□□□ -1.4
LINC02040-201ENST00000481004 LINC01553A4QN01 128 aa6.31□□□□□ -1.4
LINC02040-201ENST00000481004 RSPH10B2B2RC85 870 aa6.31□□□□□ -1.4
LINC02040-201ENST00000481004 NOP56O00567 594 aaKnown RBP6.31□□□□□ -1.4
LINC02040-201ENST00000481004 TMPRSS2O15393 492 aa6.31□□□□□ -1.4
LINC02040-201ENST00000481004 PRPF3O43395 683 aaKnown RBP6.31□□□□□ -1.4
LINC02040-201ENST00000481004 ZNF862O60290 1169 aa6.31□□□□□ -1.4
LINC02040-201ENST00000481004 BAIAP3O94812 1187 aa6.31□□□□□ -1.4
LINC02040-201ENST00000481004 GJB5O95377 273 aa6.31□□□□□ -1.4
LINC02040-201ENST00000481004 RSPH10BP0C881 870 aa6.31□□□□□ -1.4
LINC02040-201ENST00000481004 SCG2P13521 617 aa6.31□□□□□ -1.4
LINC02040-201ENST00000481004 GRIK1P39086 918 aa6.31□□□□□ -1.4
LINC02040-201ENST00000481004 ACTR2P61160 394 aa6.31□□□□□ -1.4
LINC02040-201ENST00000481004 CCT2P78371 535 aaKnown RBP6.31□□□□□ -1.4
LINC02040-201ENST00000481004 ZNF252P-AS1Q0IIN9 211 aa6.31□□□□□ -1.4
LINC02040-201ENST00000481004 LRP8Q14114 963 aa6.31□□□□□ -1.4
LINC02040-201ENST00000481004 KRT32Q14532 448 aa6.31□□□□□ -1.4
LINC02040-201ENST00000481004 PLCB4Q15147 1175 aa6.31□□□□□ -1.4
LINC02040-201ENST00000481004 CEP55Q53EZ4 464 aa6.31□□□□□ -1.4
LINC02040-201ENST00000481004 SCARA3Q6AZY7 606 aa6.31□□□□□ -1.4
LINC02040-201ENST00000481004 LLGL2Q6P1M3 1020 aa6.31□□□□□ -1.4
LINC02040-201ENST00000481004 BLOC1S2Q6QNY1 142 aa6.31□□□□□ -1.4
LINC02040-201ENST00000481004 SV2BQ7L1I2 683 aa6.31□□□□□ -1.4
LINC02040-201ENST00000481004 NLRX1Q86UT6 975 aa6.31□□□□□ -1.4
LINC02040-201ENST00000481004 PHOSPHO2Q8TCD6 241 aa6.31□□□□□ -1.4
LINC02040-201ENST00000481004 PPM1EQ8WY54 764 aa6.31□□□□□ -1.4
LINC02040-201ENST00000481004 EZH1Q92800 747 aaPredicted RBP6.31□□□□□ -1.4
LINC02040-201ENST00000481004 GJA10Q969M2 543 aa6.31□□□□□ -1.4
LINC02040-201ENST00000481004 WDR89Q96FK6 387 aaPredicted RBP6.31□□□□□ -1.4
LINC02040-201ENST00000481004 MFSD14AQ96MC6 490 aa6.31□□□□□ -1.4
LINC02040-201ENST00000481004 SLC9A7Q96T83 725 aa6.31□□□□□ -1.4
LINC02040-201ENST00000481004 ZMYND12Q9H0C1 365 aa6.31□□□□□ -1.4
LINC02040-201ENST00000481004 EHMT1Q9H9B1 1298 aa6.31□□□□□ -1.4
LINC02040-201ENST00000481004 SLC28A3Q9HAS3 691 aa6.31□□□□□ -1.4
LINC02040-201ENST00000481004 GJB4Q9NTQ9 266 aa6.31□□□□□ -1.4
LINC02040-201ENST00000481004 FAM105AQ9NUU6 356 aa6.31□□□□□ -1.4
LINC02040-201ENST00000481004 CRIM1Q9NZV1 1036 aa6.31□□□□□ -1.4
LINC02040-201ENST00000481004 VPS54Q9P1Q0 977 aa6.31□□□□□ -1.4
LINC02040-201ENST00000481004 MSRAQ9UJ68 235 aa6.31□□□□□ -1.4
LINC02040-201ENST00000481004 NAP1L2Q9ULW6 460 aaPredicted RBP6.31□□□□□ -1.4
LINC02040-201ENST00000481004 MYH9P35579 1960 aaKnown RBP6.31□□□□□ -1.4
LINC02040-201ENST00000481004 EMSYQ7Z589 1322 aa6.3□□□□□ -1.4
LINC02040-201ENST00000481004 ABHD14A-ACY1A0A1B0GW23 586 aa6.3□□□□□ -1.4
LINC02040-201ENST00000481004 ESYT2A0FGR8 921 aa6.3□□□□□ -1.4
LINC02040-201ENST00000481004 DDX39AO00148 427 aaKnown RBP6.3□□□□□ -1.4
LINC02040-201ENST00000481004 LARGE1O95461 756 aa6.3□□□□□ -1.4
LINC02040-201ENST00000481004 CTDNEP1O95476 244 aa6.3□□□□□ -1.4
LINC02040-201ENST00000481004 HMGB1P09429 215 aaKnown RBP6.3□□□□□ -1.4
LINC02040-201ENST00000481004 ACTN1P12814 892 aa6.3□□□□□ -1.4
LINC02040-201ENST00000481004 INSRRP14616 1297 aa6.3□□□□□ -1.4
LINC02040-201ENST00000481004 IFNAR1P17181 557 aa6.3□□□□□ -1.4
LINC02040-201ENST00000481004 IGBP1P78318 339 aa6.3□□□□□ -1.4
LINC02040-201ENST00000481004 HTRA4P83105 476 aaPredicted RBP6.3□□□□□ -1.4
LINC02040-201ENST00000481004 TFF2Q03403 129 aa6.3□□□□□ -1.4
LINC02040-201ENST00000481004 TMEM62Q0P6H9 643 aa6.3□□□□□ -1.4
LINC02040-201ENST00000481004 ST3GAL1Q11201 340 aa6.3□□□□□ -1.4
LINC02040-201ENST00000481004 PPFIA1Q13136 1202 aa6.3□□□□□ -1.4
LINC02040-201ENST00000481004 GRB10Q13322 594 aa6.3□□□□□ -1.4
LINC02040-201ENST00000481004 LPIN1Q14693 890 aa6.3□□□□□ -1.4
LINC02040-201ENST00000481004 CPSF6Q16630 551 aaKnown RBP eCLIP6.3□□□□□ -1.4
LINC02040-201ENST00000481004 TMCO4Q5TGY1 634 aa6.3□□□□□ -1.4
LINC02040-201ENST00000481004 ABHD15Q6UXT9 468 aa6.3□□□□□ -1.4
LINC02040-201ENST00000481004 SYNE3Q6ZMZ3 975 aa6.3□□□□□ -1.4
LINC02040-201ENST00000481004 RUFY3Q7L099 469 aa6.3□□□□□ -1.4
LINC02040-201ENST00000481004 RTN4RL1Q86UN2 441 aaPredicted RBP6.3□□□□□ -1.4
LINC02040-201ENST00000481004 CCDC60Q8IWA6 550 aaPredicted RBP6.3□□□□□ -1.4
LINC02040-201ENST00000481004 Q8N3U1 123 aa6.3□□□□□ -1.4
LINC02040-201ENST00000481004 FBXL6Q8N531 539 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms