RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 PPP1R10Q96QC0 940 aaKnown RBP16.46■□□□□ 0.23
TDP2-205ENST00000480495 REEP2Q9BRK0 252 aa16.46■□□□□ 0.23
TDP2-205ENST00000480495 PAAF1Q9BRP4 392 aa16.46■□□□□ 0.23
TDP2-205ENST00000480495 CXCL16Q9H2A7 254 aa16.46■□□□□ 0.23
TDP2-205ENST00000480495 C11orf16Q9NQ32 467 aa16.46■□□□□ 0.23
TDP2-205ENST00000480495 FNIP2Q9P278 1114 aa16.46■□□□□ 0.23
TDP2-205ENST00000480495 CACNG4Q9UBN1 327 aa16.46■□□□□ 0.23
TDP2-205ENST00000480495 CCDC39Q9UFE4 941 aa16.46■□□□□ 0.23
TDP2-205ENST00000480495 MUTYHQ9UIF7 546 aa16.46■□□□□ 0.23
TDP2-205ENST00000480495 FBXO2Q9UK22 296 aaPredicted RBP16.46■□□□□ 0.23
TDP2-205ENST00000480495 NR2E1Q9Y466 385 aa16.46■□□□□ 0.23
TDP2-205ENST00000480495 SPDYE4A6NLX3 237 aa16.45■□□□□ 0.22
TDP2-205ENST00000480495 FAM13AO94988 1023 aa16.45■□□□□ 0.22
TDP2-205ENST00000480495 KIF4AO95239 1232 aa16.45■□□□□ 0.22
TDP2-205ENST00000480495 GLUD1P00367 558 aa16.45■□□□□ 0.22
TDP2-205ENST00000480495 KRT18P05783 430 aaKnown RBP16.45■□□□□ 0.22
TDP2-205ENST00000480495 PDIA4P13667 645 aaKnown RBP16.45■□□□□ 0.22
TDP2-205ENST00000480495 ABCD1P33897 745 aa16.45■□□□□ 0.22
TDP2-205ENST00000480495 TXLNAP40222 546 aa16.45■□□□□ 0.22
TDP2-205ENST00000480495 ZNF131P52739 623 aa16.45■□□□□ 0.22
TDP2-205ENST00000480495 CACNB1Q02641 598 aaPredicted RBP16.45■□□□□ 0.22
TDP2-205ENST00000480495 NOLC1Q14978 699 aaKnown RBP eCLIP16.45■□□□□ 0.22
TDP2-205ENST00000480495 FAM173BQ6P4H8 233 aa16.45■□□□□ 0.22
TDP2-205ENST00000480495 ALKAL1Q6UXT8 129 aa16.45■□□□□ 0.22
TDP2-205ENST00000480495 HAUS6Q7Z4H7 955 aa16.45■□□□□ 0.22
TDP2-205ENST00000480495 ZBTB33Q86T24 672 aa16.45■□□□□ 0.22
TDP2-205ENST00000480495 HSCBQ8IWL3 235 aa16.45■□□□□ 0.22
TDP2-205ENST00000480495 CEP120Q8N960 986 aa16.45■□□□□ 0.22
TDP2-205ENST00000480495 HDAC7Q8WUI4 952 aa16.45■□□□□ 0.22
TDP2-205ENST00000480495 RIN2Q8WYP3 895 aaPredicted RBP16.45■□□□□ 0.22
TDP2-205ENST00000480495 EPSTI1Q96J88 318 aa16.45■□□□□ 0.22
TDP2-205ENST00000480495 ACAP3Q96P50 834 aa16.45■□□□□ 0.22
TDP2-205ENST00000480495 TTPALQ9BTX7 342 aa16.45■□□□□ 0.22
TDP2-205ENST00000480495 POMKQ9H5K3 350 aa16.45■□□□□ 0.22
TDP2-205ENST00000480495 PARVGQ9HBI0 331 aa16.45■□□□□ 0.22
TDP2-205ENST00000480495 SLC38A7Q9NVC3 462 aa16.45■□□□□ 0.22
TDP2-205ENST00000480495 STK17AQ9UEE5 414 aa16.45■□□□□ 0.22
TDP2-205ENST00000480495 GTF3C3Q9Y5Q9 886 aa16.45■□□□□ 0.22
TDP2-205ENST00000480495 SMIM28A0A1B0GU29 152 aa16.44■□□□□ 0.22
TDP2-205ENST00000480495 FAM86C2PA6NEL3 165 aa16.44■□□□□ 0.22
TDP2-205ENST00000480495 PRR33A8MZF0 331 aa16.44■□□□□ 0.22
TDP2-205ENST00000480495 TMEM189-UBE2V1I3L0A0 370 aa16.44■□□□□ 0.22
TDP2-205ENST00000480495 OSTNP61366 133 aa16.44■□□□□ 0.22
TDP2-205ENST00000480495 MCL1Q07820 350 aa16.44■□□□□ 0.22
TDP2-205ENST00000480495 SLC39A14Q15043 492 aa16.44■□□□□ 0.22
TDP2-205ENST00000480495 GLRA4Q5JXX5 417 aa16.44■□□□□ 0.22
TDP2-205ENST00000480495 PDXDC1Q6P996 788 aa16.44■□□□□ 0.22
TDP2-205ENST00000480495 DCLRE1AQ6PJP8 1040 aa16.44■□□□□ 0.22
TDP2-205ENST00000480495 TMC5Q6UXY8 1006 aa16.44■□□□□ 0.22
TDP2-205ENST00000480495 CYP26C1Q6V0L0 522 aa16.44■□□□□ 0.22
TDP2-205ENST00000480495 C15orf39Q6ZRI6 1047 aa16.44■□□□□ 0.22
TDP2-205ENST00000480495 GPR149Q86SP6 731 aa16.44■□□□□ 0.22
TDP2-205ENST00000480495 MYCT1Q8N699 235 aa16.44■□□□□ 0.22
TDP2-205ENST00000480495 CMASQ8NFW8 434 aaPredicted RBP16.44■□□□□ 0.22
TDP2-205ENST00000480495 DDX27Q96GQ7 796 aaKnown RBP16.44■□□□□ 0.22
TDP2-205ENST00000480495 ZBTB45Q96K62 511 aaPredicted RBP16.44■□□□□ 0.22
TDP2-205ENST00000480495 B3GALT6Q96L58 329 aa16.44■□□□□ 0.22
TDP2-205ENST00000480495 SNX27Q96L92 541 aa16.44■□□□□ 0.22
TDP2-205ENST00000480495 MAN1C1Q9NR34 630 aa16.44■□□□□ 0.22
TDP2-205ENST00000480495 ANKFY1Q9P2R3 1169 aa16.44■□□□□ 0.22
TDP2-205ENST00000480495 CLDN3O15551 220 aa16.43■□□□□ 0.22
TDP2-205ENST00000480495 TBCAO75347 108 aaKnown RBP16.43■□□□□ 0.22
TDP2-205ENST00000480495 KCNE1P15382 129 aa16.43■□□□□ 0.22
TDP2-205ENST00000480495 CEBPZQ03701 1054 aaKnown RBP16.43■□□□□ 0.22
TDP2-205ENST00000480495 SPECC1Q5M775 1068 aa16.43■□□□□ 0.22
TDP2-205ENST00000480495 FAM171A1Q5VUB5 890 aa16.43■□□□□ 0.22
TDP2-205ENST00000480495 USP49Q70CQ1 688 aa16.43■□□□□ 0.22
TDP2-205ENST00000480495 KRI1Q8N9T8 703 aaKnown RBP16.43■□□□□ 0.22
TDP2-205ENST00000480495 HASPINQ8TF76 798 aa16.43■□□□□ 0.22
TDP2-205ENST00000480495 PIK3R5Q8WYR1 880 aa16.43■□□□□ 0.22
TDP2-205ENST00000480495 EDAQ92838 391 aa16.43■□□□□ 0.22
TDP2-205ENST00000480495 BICD1Q96G01 975 aa16.43■□□□□ 0.22
TDP2-205ENST00000480495 CLIC6Q96NY7 704 aa16.43■□□□□ 0.22
TDP2-205ENST00000480495 USP28Q96RU2 1077 aa16.43■□□□□ 0.22
TDP2-205ENST00000480495 RHOBTB2Q9BYZ6 727 aa16.43■□□□□ 0.22
TDP2-205ENST00000480495 PLEKHA4Q9H4M7 779 aa16.43■□□□□ 0.22
TDP2-205ENST00000480495 TSHZ2Q9NRE2 1034 aa16.43■□□□□ 0.22
TDP2-205ENST00000480495 CNTN3Q9P232 1028 aa16.43■□□□□ 0.22
TDP2-205ENST00000480495 CDH22Q9UJ99 828 aa16.43■□□□□ 0.22
TDP2-205ENST00000480495 USTQ9Y2C2 406 aa16.43■□□□□ 0.22
TDP2-205ENST00000480495 C5orf42Q9H799 3197 aa16.43■□□□□ 0.22
TDP2-205ENST00000480495 K7ENM7 598 aa16.42■□□□□ 0.22
TDP2-205ENST00000480495 TRAPPC3O43617 180 aa16.42■□□□□ 0.22
TDP2-205ENST00000480495 TRAK2O60296 914 aa16.42■□□□□ 0.22
TDP2-205ENST00000480495 B3GAT3O94766 335 aa16.42■□□□□ 0.22
TDP2-205ENST00000480495 PIGRP01833 764 aa16.42■□□□□ 0.22
TDP2-205ENST00000480495 WEE2P0C1S8 567 aa16.42■□□□□ 0.22
TDP2-205ENST00000480495 HARSP12081 509 aaKnown RBP16.42■□□□□ 0.22
TDP2-205ENST00000480495 MATR3P43243 847 aaKnown RBP eCLIP16.42■□□□□ 0.22
TDP2-205ENST00000480495 NASPP49321 788 aaPredicted RBP16.42■□□□□ 0.22
TDP2-205ENST00000480495 CLCNKBP51801 687 aa16.42■□□□□ 0.22
TDP2-205ENST00000480495 KYAT1Q16773 422 aa16.42■□□□□ 0.22
TDP2-205ENST00000480495 UPP1Q16831 310 aa16.42■□□□□ 0.22
TDP2-205ENST00000480495 RTP2Q5QGT7 225 aa16.42■□□□□ 0.22
TDP2-205ENST00000480495 RRAGBQ5VZM2 374 aa16.42■□□□□ 0.22
TDP2-205ENST00000480495 KANK3Q6NY19 840 aa16.42■□□□□ 0.22
TDP2-205ENST00000480495 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.42■□□□□ 0.22
TDP2-205ENST00000480495 ZHX3Q9H4I2 956 aa16.42■□□□□ 0.22
TDP2-205ENST00000480495 TBX20Q9UMR3 447 aa16.42■□□□□ 0.22
TDP2-205ENST00000480495 TGM5O43548 720 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms