RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 PPP3CAQ08209 521 aa18.27■□□□□ 0.52
SCAMP3-207ENST00000480219 MFSD5Q6N075 450 aa18.27■□□□□ 0.52
SCAMP3-207ENST00000480219 ZNF598Q86UK7 904 aaKnown RBP18.27■□□□□ 0.52
SCAMP3-207ENST00000480219 RTN4RL1Q86UN2 441 aaPredicted RBP18.27■□□□□ 0.52
SCAMP3-207ENST00000480219 WDR49Q8IV35 697 aa18.27■□□□□ 0.52
SCAMP3-207ENST00000480219 DBF4BQ8NFT6 615 aa18.27■□□□□ 0.52
SCAMP3-207ENST00000480219 SEPT8Q92599 483 aa18.27■□□□□ 0.52
SCAMP3-207ENST00000480219 SNX27Q96L92 541 aa18.27■□□□□ 0.52
SCAMP3-207ENST00000480219 ADAM2Q99965 735 aa18.27■□□□□ 0.52
SCAMP3-207ENST00000480219 PPP1R12CQ9BZL4 782 aa18.27■□□□□ 0.52
SCAMP3-207ENST00000480219 TRIM6Q9C030 488 aaPredicted RBP18.27■□□□□ 0.52
SCAMP3-207ENST00000480219 NXF3Q9H4D5 531 aaKnown RBP18.27■□□□□ 0.52
SCAMP3-207ENST00000480219 TMEM8AQ9HCN3 771 aa18.27■□□□□ 0.52
SCAMP3-207ENST00000480219 PDE11AQ9HCR9 933 aa18.27■□□□□ 0.52
SCAMP3-207ENST00000480219 C1orf112Q9NSG2 853 aa18.27■□□□□ 0.52
SCAMP3-207ENST00000480219 SNTG2Q9NY99 539 aa18.27■□□□□ 0.52
SCAMP3-207ENST00000480219 CNTN3Q9P232 1028 aa18.27■□□□□ 0.52
SCAMP3-207ENST00000480219 DERAQ9Y315 318 aa18.27■□□□□ 0.52
SCAMP3-207ENST00000480219 ITIH6Q6UXX5 1313 aa18.26■□□□□ 0.51
SCAMP3-207ENST00000480219 TRIM49P0CI25 452 aa18.26■□□□□ 0.51
SCAMP3-207ENST00000480219 TRIM49CP0CI26 452 aa18.26■□□□□ 0.51
SCAMP3-207ENST00000480219 CXCL8P10145 99 aa18.26■□□□□ 0.51
SCAMP3-207ENST00000480219 ATF7P17544 494 aaPredicted RBP18.26■□□□□ 0.51
SCAMP3-207ENST00000480219 ITGB8P26012 769 aa18.26■□□□□ 0.51
SCAMP3-207ENST00000480219 CCL23P55773 120 aa18.26■□□□□ 0.51
SCAMP3-207ENST00000480219 DCAF17Q5H9S7 520 aaPredicted RBP18.26■□□□□ 0.51
SCAMP3-207ENST00000480219 VSTM4Q8IW00 320 aa18.26■□□□□ 0.51
SCAMP3-207ENST00000480219 HACE1Q8IYU2 909 aa18.26■□□□□ 0.51
SCAMP3-207ENST00000480219 SCLYQ96I15 445 aa18.26■□□□□ 0.51
SCAMP3-207ENST00000480219 FNBP1Q96RU3 617 aa18.26■□□□□ 0.51
SCAMP3-207ENST00000480219 TOPORSQ9NS56 1045 aaPredicted RBP18.26■□□□□ 0.51
SCAMP3-207ENST00000480219 SIK3Q9Y2K2 1263 aa18.26■□□□□ 0.51
SCAMP3-207ENST00000480219 C2CD2Q9Y426 696 aa18.26■□□□□ 0.51
SCAMP3-207ENST00000480219 PTPRJQ12913 1337 aa18.25■□□□□ 0.51
SCAMP3-207ENST00000480219 LACTBL1A8MY62 500 aa18.25■□□□□ 0.51
SCAMP3-207ENST00000480219 RECQL4O94761 1208 aa18.25■□□□□ 0.51
SCAMP3-207ENST00000480219 EOMESO95936 686 aa18.25■□□□□ 0.51
SCAMP3-207ENST00000480219 C4BPAP04003 597 aaKnown RBP18.25■□□□□ 0.51
SCAMP3-207ENST00000480219 PFKMP08237 780 aa18.25■□□□□ 0.51
SCAMP3-207ENST00000480219 KCNE1P15382 129 aa18.25■□□□□ 0.51
SCAMP3-207ENST00000480219 PLCB2Q00722 1185 aa18.25■□□□□ 0.51
SCAMP3-207ENST00000480219 ZBTB6Q15916 424 aa18.25■□□□□ 0.51
SCAMP3-207ENST00000480219 ZACNQ401N2 412 aa18.25■□□□□ 0.51
SCAMP3-207ENST00000480219 CBWD6Q4V339 395 aa18.25■□□□□ 0.51
SCAMP3-207ENST00000480219 CBWD3Q5JTY5 395 aa18.25■□□□□ 0.51
SCAMP3-207ENST00000480219 CBWD5Q5RIA9 395 aa18.25■□□□□ 0.51
SCAMP3-207ENST00000480219 FKBP15Q5T1M5 1219 aa18.25■□□□□ 0.51
SCAMP3-207ENST00000480219 TCERG1LQ5VWI1 586 aa18.25■□□□□ 0.51
SCAMP3-207ENST00000480219 SLC24A5Q71RS6 500 aa18.25■□□□□ 0.51
SCAMP3-207ENST00000480219 ECHDC2Q86YB7 292 aa18.25■□□□□ 0.51
SCAMP3-207ENST00000480219 CREBRFQ8IUR6 639 aa18.25■□□□□ 0.51
SCAMP3-207ENST00000480219 CRIPAKQ8N1N5 446 aa18.25■□□□□ 0.51
SCAMP3-207ENST00000480219 ZNF516Q92618 1163 aa18.25■□□□□ 0.51
SCAMP3-207ENST00000480219 CCDC127Q96BQ5 260 aa18.25■□□□□ 0.51
SCAMP3-207ENST00000480219 TMEM117Q9H0C3 514 aa18.25■□□□□ 0.51
SCAMP3-207ENST00000480219 ELAC1Q9H777 363 aaKnown RBP18.25■□□□□ 0.51
SCAMP3-207ENST00000480219 GIT1Q9Y2X7 761 aa18.25■□□□□ 0.51
SCAMP3-207ENST00000480219 SCN5AQ14524 2016 aa18.25■□□□□ 0.51
SCAMP3-207ENST00000480219 MKI67P46013 3256 aaKnown RBP18.24■□□□□ 0.51
SCAMP3-207ENST00000480219 LTBP2Q14767 1821 aa18.24■□□□□ 0.51
SCAMP3-207ENST00000480219 CITO14578 2027 aa18.24■□□□□ 0.51
SCAMP3-207ENST00000480219 MXI1P50539 228 aa18.24■□□□□ 0.51
SCAMP3-207ENST00000480219 YARSP54577 528 aaKnown RBP18.24■□□□□ 0.51
SCAMP3-207ENST00000480219 OSTNP61366 133 aa18.24■□□□□ 0.51
SCAMP3-207ENST00000480219 UBXN1Q04323 297 aa18.24■□□□□ 0.51
SCAMP3-207ENST00000480219 KCNMA1Q12791 1236 aa18.24■□□□□ 0.51
SCAMP3-207ENST00000480219 TCTN1Q2MV58 587 aa18.24■□□□□ 0.51
SCAMP3-207ENST00000480219 KRT39Q6A163 491 aa18.24■□□□□ 0.51
SCAMP3-207ENST00000480219 DPY19L2P1Q6NXN4 242 aa18.24■□□□□ 0.51
SCAMP3-207ENST00000480219 CNKSR3Q6P9H4 555 aa18.24■□□□□ 0.51
SCAMP3-207ENST00000480219 SV2AQ7L0J3 742 aa18.24■□□□□ 0.51
SCAMP3-207ENST00000480219 EFCAB13Q8IY85 973 aa18.24■□□□□ 0.51
SCAMP3-207ENST00000480219 PGBD4Q96DM1 585 aa18.24■□□□□ 0.51
SCAMP3-207ENST00000480219 HTATIP2Q9BUP3 242 aa18.24■□□□□ 0.51
SCAMP3-207ENST00000480219 RNF39Q9H2S5 420 aa18.24■□□□□ 0.51
SCAMP3-207ENST00000480219 UBN1Q9NPG3 1134 aa18.24■□□□□ 0.51
SCAMP3-207ENST00000480219 HES2Q9Y543 173 aa18.24■□□□□ 0.51
SCAMP3-207ENST00000480219 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.24■□□□□ 0.51
SCAMP3-207ENST00000480219 TET1Q8NFU7 2136 aa18.23■□□□□ 0.51
SCAMP3-207ENST00000480219 PDCD11Q14690 1871 aaKnown RBP18.23■□□□□ 0.51
SCAMP3-207ENST00000480219 ENPP3O14638 875 aa18.23■□□□□ 0.51
SCAMP3-207ENST00000480219 DLATP10515 647 aaKnown RBP18.23■□□□□ 0.51
SCAMP3-207ENST00000480219 RAG1P15918 1043 aa18.23■□□□□ 0.51
SCAMP3-207ENST00000480219 DUOXA2Q1HG44 320 aa18.23■□□□□ 0.51
SCAMP3-207ENST00000480219 EPC2Q52LR7 807 aa18.23■□□□□ 0.51
SCAMP3-207ENST00000480219 FIGNQ5HY92 759 aa18.23■□□□□ 0.51
SCAMP3-207ENST00000480219 AGMOQ6ZNB7 445 aa18.23■□□□□ 0.51
SCAMP3-207ENST00000480219 TMEM199Q8N511 208 aa18.23■□□□□ 0.51
SCAMP3-207ENST00000480219 LMO3Q8TAP4 145 aa18.23■□□□□ 0.51
SCAMP3-207ENST00000480219 RSPH1Q8WYR4 309 aa18.23■□□□□ 0.51
SCAMP3-207ENST00000480219 POP1Q99575 1024 aaKnown RBP18.23■□□□□ 0.51
SCAMP3-207ENST00000480219 PLCB1Q9NQ66 1216 aa18.23■□□□□ 0.51
SCAMP3-207ENST00000480219 ITGA4P13612 1032 aa18.22■□□□□ 0.51
SCAMP3-207ENST00000480219 TNNI1P19237 187 aa18.22■□□□□ 0.51
SCAMP3-207ENST00000480219 GCLMP48507 274 aa18.22■□□□□ 0.51
SCAMP3-207ENST00000480219 MYL7Q01449 175 aa18.22■□□□□ 0.51
SCAMP3-207ENST00000480219 TBX2Q13207 712 aaPredicted RBP18.22■□□□□ 0.51
SCAMP3-207ENST00000480219 SYCP1Q15431 976 aa18.22■□□□□ 0.51
SCAMP3-207ENST00000480219 SPECC1LQ69YQ0 1117 aa18.22■□□□□ 0.51
SCAMP3-207ENST00000480219 SMYD5Q6GMV2 418 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms