RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 ZBTB33Q86T24 672 aa16.51■□□□□ 0.23
PRKN-207ENST00000479615 C12orf76Q8N812 135 aaPredicted RBP16.51■□□□□ 0.23
PRKN-207ENST00000479615 RIN2Q8WYP3 895 aaPredicted RBP16.51■□□□□ 0.23
PRKN-207ENST00000479615 PIK3R5Q8WYR1 880 aa16.51■□□□□ 0.23
PRKN-207ENST00000479615 STAMQ92783 540 aa16.51■□□□□ 0.23
PRKN-207ENST00000479615 FAM122AQ96E09 287 aa16.51■□□□□ 0.23
PRKN-207ENST00000479615 ACAP3Q96P50 834 aa16.51■□□□□ 0.23
PRKN-207ENST00000479615 PPP1R10Q96QC0 940 aaKnown RBP16.51■□□□□ 0.23
PRKN-207ENST00000479615 POLD4Q9HCU8 107 aa16.51■□□□□ 0.23
PRKN-207ENST00000479615 MAN1C1Q9NR34 630 aa16.51■□□□□ 0.23
PRKN-207ENST00000479615 ZDHHC7Q9NXF8 308 aa16.51■□□□□ 0.23
PRKN-207ENST00000479615 VPS37CA5D8V6 355 aaPredicted RBP16.5■□□□□ 0.23
PRKN-207ENST00000479615 CASTOR2A6NHX0 329 aa16.5■□□□□ 0.23
PRKN-207ENST00000479615 SLC16A4O15374 487 aa16.5■□□□□ 0.23
PRKN-207ENST00000479615 EDN1P05305 212 aa16.5■□□□□ 0.23
PRKN-207ENST00000479615 PLA2G5P39877 138 aa16.5■□□□□ 0.23
PRKN-207ENST00000479615 MTMR3Q13615 1198 aa16.5■□□□□ 0.23
PRKN-207ENST00000479615 SF3A1Q15459 793 aaKnown RBP16.5■□□□□ 0.23
PRKN-207ENST00000479615 ALKAL1Q6UXT8 129 aa16.5■□□□□ 0.23
PRKN-207ENST00000479615 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.5■□□□□ 0.23
PRKN-207ENST00000479615 TMEM161BQ8NDZ6 487 aa16.5■□□□□ 0.23
PRKN-207ENST00000479615 RASSF8Q8NHQ8 419 aa16.5■□□□□ 0.23
PRKN-207ENST00000479615 PRRX2Q99811 253 aa16.5■□□□□ 0.23
PRKN-207ENST00000479615 TARS2Q9BW92 718 aaKnown RBP16.5■□□□□ 0.23
PRKN-207ENST00000479615 CCSER1Q9C0I3 900 aa16.5■□□□□ 0.23
PRKN-207ENST00000479615 CDT1Q9H211 546 aa16.5■□□□□ 0.23
PRKN-207ENST00000479615 SORCS3Q9UPU3 1222 aa16.5■□□□□ 0.23
PRKN-207ENST00000479615 SMIM28A0A1B0GU29 152 aa16.49■□□□□ 0.23
PRKN-207ENST00000479615 CCDC195A0A1B0GUA6 201 aa16.49■□□□□ 0.23
PRKN-207ENST00000479615 TMEM221A6NGB7 291 aa16.49■□□□□ 0.23
PRKN-207ENST00000479615 M0R296 226 aa16.49■□□□□ 0.23
PRKN-207ENST00000479615 B3GAT3O94766 335 aa16.49■□□□□ 0.23
PRKN-207ENST00000479615 KIF4AO95239 1232 aa16.49■□□□□ 0.23
PRKN-207ENST00000479615 MAPTP10636 758 aaKnown RBP16.49■□□□□ 0.23
PRKN-207ENST00000479615 FAM171A1Q5VUB5 890 aa16.49■□□□□ 0.23
PRKN-207ENST00000479615 LILRA6Q6PI73 481 aa16.49■□□□□ 0.23
PRKN-207ENST00000479615 PBXIP1Q96AQ6 731 aa16.49■□□□□ 0.23
PRKN-207ENST00000479615 TSPAN18Q96SJ8 248 aa16.49■□□□□ 0.23
PRKN-207ENST00000479615 ZSCAN16Q9H4T2 348 aaPredicted RBP16.49■□□□□ 0.23
PRKN-207ENST00000479615 PLEKHA5Q9HAU0 1116 aa16.49■□□□□ 0.23
PRKN-207ENST00000479615 CCDC39Q9UFE4 941 aa16.49■□□□□ 0.23
PRKN-207ENST00000479615 USP20Q9Y2K6 914 aa16.49■□□□□ 0.23
PRKN-207ENST00000479615 MORC2Q9Y6X9 1032 aaPredicted RBP16.49■□□□□ 0.23
PRKN-207ENST00000479615 SFI1A8K8P3 1242 aa16.48■□□□□ 0.23
PRKN-207ENST00000479615 C2CD4DB7Z1M9 353 aa16.48■□□□□ 0.23
PRKN-207ENST00000479615 F8W810 466 aa16.48■□□□□ 0.23
PRKN-207ENST00000479615 CLDN3O15551 220 aa16.48■□□□□ 0.23
PRKN-207ENST00000479615 TGM5O43548 720 aa16.48■□□□□ 0.23
PRKN-207ENST00000479615 KCNE1P15382 129 aa16.48■□□□□ 0.23
PRKN-207ENST00000479615 RPL9P32969 192 aaKnown RBP16.48■□□□□ 0.23
PRKN-207ENST00000479615 NOLC1Q14978 699 aaKnown RBP eCLIP16.48■□□□□ 0.23
PRKN-207ENST00000479615 UPP1Q16831 310 aa16.48■□□□□ 0.23
PRKN-207ENST00000479615 HFE2Q6ZVN8 426 aa16.48■□□□□ 0.23
PRKN-207ENST00000479615 TAS1R3Q7RTX0 852 aa16.48■□□□□ 0.23
PRKN-207ENST00000479615 CEP57Q86XR8 500 aa16.48■□□□□ 0.23
PRKN-207ENST00000479615 SUGP1Q8IWZ8 645 aaKnown RBP16.48■□□□□ 0.23
PRKN-207ENST00000479615 PLIN2Q99541 437 aa16.48■□□□□ 0.23
PRKN-207ENST00000479615 PAAF1Q9BRP4 392 aa16.48■□□□□ 0.23
PRKN-207ENST00000479615 PARVGQ9HBI0 331 aa16.48■□□□□ 0.23
PRKN-207ENST00000479615 WDR6Q9NNW5 1121 aaKnown RBP16.48■□□□□ 0.23
PRKN-207ENST00000479615 FAM13AO94988 1023 aa16.47■□□□□ 0.23
PRKN-207ENST00000479615 KRT18P05783 430 aaKnown RBP16.47■□□□□ 0.23
PRKN-207ENST00000479615 WEE2P0C1S8 567 aa16.47■□□□□ 0.23
PRKN-207ENST00000479615 SYT1P21579 422 aa16.47■□□□□ 0.23
PRKN-207ENST00000479615 FGFR3P22607 806 aa16.47■□□□□ 0.23
PRKN-207ENST00000479615 DDIT3P35638 169 aa16.47■□□□□ 0.23
PRKN-207ENST00000479615 TXLNAP40222 546 aa16.47■□□□□ 0.23
PRKN-207ENST00000479615 ZNF131P52739 623 aa16.47■□□□□ 0.23
PRKN-207ENST00000479615 NCKAP1LP55160 1127 aa16.47■□□□□ 0.23
PRKN-207ENST00000479615 MCL1Q07820 350 aa16.47■□□□□ 0.23
PRKN-207ENST00000479615 RAD51AP2Q09MP3 1159 aa16.47■□□□□ 0.23
PRKN-207ENST00000479615 PSMD5Q16401 504 aa16.47■□□□□ 0.23
PRKN-207ENST00000479615 UVSSAQ2YD98 709 aa16.47■□□□□ 0.23
PRKN-207ENST00000479615 ARSHQ5FYA8 562 aa16.47■□□□□ 0.23
PRKN-207ENST00000479615 RTP2Q5QGT7 225 aa16.47■□□□□ 0.23
PRKN-207ENST00000479615 ANKS3Q6ZW76 656 aa16.47■□□□□ 0.23
PRKN-207ENST00000479615 HAUS6Q7Z4H7 955 aa16.47■□□□□ 0.23
PRKN-207ENST00000479615 GPBP1Q86WP2 473 aa16.47■□□□□ 0.23
PRKN-207ENST00000479615 PALB2Q86YC2 1186 aa16.47■□□□□ 0.23
PRKN-207ENST00000479615 KREMEN2Q8NCW0 462 aa16.47■□□□□ 0.23
PRKN-207ENST00000479615 LNX1Q8TBB1 728 aaPredicted RBP16.47■□□□□ 0.23
PRKN-207ENST00000479615 RAD54LQ92698 747 aa16.47■□□□□ 0.23
PRKN-207ENST00000479615 NXPE3Q969Y0 559 aa16.47■□□□□ 0.23
PRKN-207ENST00000479615 PRKD2Q9BZL6 878 aa16.47■□□□□ 0.23
PRKN-207ENST00000479615 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.47■□□□□ 0.23
PRKN-207ENST00000479615 CNTN3Q9P232 1028 aa16.47■□□□□ 0.23
PRKN-207ENST00000479615 IGSF9Q9P2J2 1179 aa16.47■□□□□ 0.23
PRKN-207ENST00000479615 SRPRBQ9Y5M8 271 aaKnown RBP16.47■□□□□ 0.23
PRKN-207ENST00000479615 TDRD15B5MCY1 1934 aaKnown RBP16.47■□□□□ 0.23
PRKN-207ENST00000479615 K7ELQ4 463 aaPredicted RBP16.46■□□□□ 0.23
PRKN-207ENST00000479615 ABLIM1O14639 778 aa16.46■□□□□ 0.23
PRKN-207ENST00000479615 HNRNPA1P09651 372 aaKnown RBP eCLIP16.46■□□□□ 0.23
PRKN-207ENST00000479615 HOXA9P31269 272 aa16.46■□□□□ 0.23
PRKN-207ENST00000479615 CLCNKBP51801 687 aa16.46■□□□□ 0.23
PRKN-207ENST00000479615 NUBP1P53384 320 aa16.46■□□□□ 0.23
PRKN-207ENST00000479615 LIN9Q5TKA1 542 aa16.46■□□□□ 0.23
PRKN-207ENST00000479615 FBXL6Q8N531 539 aa16.46■□□□□ 0.23
PRKN-207ENST00000479615 MYCT1Q8N699 235 aa16.46■□□□□ 0.23
PRKN-207ENST00000479615 SMG7Q92540 1137 aaKnown RBP16.46■□□□□ 0.23
PRKN-207ENST00000479615 LARP4BQ92615 738 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms