RNA–Protein interactions for RNA: ENST00000479430.5

COPS7B-220, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-220ENST00000479430 KPNA6O60684 536 aa4.56□□□□□ -1.68
COPS7B-220ENST00000479430 F2P00734 622 aa4.56□□□□□ -1.68
COPS7B-220ENST00000479430 DCNP07585 359 aaKnown RBP4.56□□□□□ -1.68
COPS7B-220ENST00000479430 PDHBP11177 359 aa4.56□□□□□ -1.68
COPS7B-220ENST00000479430 EPHA1P21709 976 aa4.56□□□□□ -1.68
COPS7B-220ENST00000479430 UBA1P22314 1058 aaKnown RBP4.56□□□□□ -1.68
COPS7B-220ENST00000479430 ICAM3P32942 547 aa4.56□□□□□ -1.68
COPS7B-220ENST00000479430 GSTM4Q03013 218 aa4.56□□□□□ -1.68
COPS7B-220ENST00000479430 COASYQ13057 564 aa4.56□□□□□ -1.68
COPS7B-220ENST00000479430 ANGPT1Q15389 498 aa4.56□□□□□ -1.68
COPS7B-220ENST00000479430 CDC37Q16543 378 aaPredicted RBP4.56□□□□□ -1.68
COPS7B-220ENST00000479430 PCSK7Q16549 785 aa4.56□□□□□ -1.68
COPS7B-220ENST00000479430 LONRF3Q496Y0 759 aa4.56□□□□□ -1.68
COPS7B-220ENST00000479430 RARS2Q5T160 578 aaKnown RBP4.56□□□□□ -1.68
COPS7B-220ENST00000479430 KIAA1211LQ6NV74 962 aa4.56□□□□□ -1.68
COPS7B-220ENST00000479430 ELMSAN1Q6PJG2 1045 aa4.56□□□□□ -1.68
COPS7B-220ENST00000479430 LRFN4Q6PJG9 635 aa4.56□□□□□ -1.68
COPS7B-220ENST00000479430 CYFIP1Q7L576 1253 aa4.56□□□□□ -1.68
COPS7B-220ENST00000479430 TRMT1LQ7Z2T5 733 aaKnown RBP4.56□□□□□ -1.68
COPS7B-220ENST00000479430 SESTD1Q86VW0 696 aa4.56□□□□□ -1.68
COPS7B-220ENST00000479430 FCHSD1Q86WN1 690 aa4.56□□□□□ -1.68
COPS7B-220ENST00000479430 ERC1Q8IUD2 1116 aa4.56□□□□□ -1.68
COPS7B-220ENST00000479430 RPAP2Q8IXW5 612 aaPredicted RBP4.56□□□□□ -1.68
COPS7B-220ENST00000479430 LMBR1Q8WVP7 490 aa4.56□□□□□ -1.68
COPS7B-220ENST00000479430 TMEM40Q8WWA1 233 aa4.56□□□□□ -1.68
COPS7B-220ENST00000479430 ZNF689Q96CS4 500 aaPredicted RBP4.56□□□□□ -1.68
COPS7B-220ENST00000479430 KIF1BPQ96EK5 621 aa4.56□□□□□ -1.68
COPS7B-220ENST00000479430 PLPPR2Q96GM1 343 aa4.56□□□□□ -1.68
COPS7B-220ENST00000479430 SAMD11Q96NU1 681 aa4.56□□□□□ -1.68
COPS7B-220ENST00000479430 C11orf84Q9BUA3 381 aaPredicted RBP4.56□□□□□ -1.68
COPS7B-220ENST00000479430 SEZ6LQ9BYH1 1024 aa4.56□□□□□ -1.68
COPS7B-220ENST00000479430 PXMP2Q9NR77 195 aa4.56□□□□□ -1.68
COPS7B-220ENST00000479430 AAASQ9NRG9 546 aa4.56□□□□□ -1.68
COPS7B-220ENST00000479430 GABBR1Q9UBS5 961 aa4.56□□□□□ -1.68
COPS7B-220ENST00000479430 REV1Q9UBZ9 1251 aa4.56□□□□□ -1.68
COPS7B-220ENST00000479430 DACH1Q9UI36 760 aa4.56□□□□□ -1.68
COPS7B-220ENST00000479430 KLF15Q9UIH9 416 aa4.56□□□□□ -1.68
COPS7B-220ENST00000479430 NAGPAQ9UK23 515 aa4.56□□□□□ -1.68
COPS7B-220ENST00000479430 CA14Q9ULX7 337 aa4.56□□□□□ -1.68
COPS7B-220ENST00000479430 GINS2Q9Y248 185 aa4.56□□□□□ -1.68
COPS7B-220ENST00000479430 ATP8A1Q9Y2Q0 1164 aa4.56□□□□□ -1.68
COPS7B-220ENST00000479430 CDY2AQ9Y6F7 541 aa4.56□□□□□ -1.68
COPS7B-220ENST00000479430 NOTCH4Q99466 2003 aa4.56□□□□□ -1.68
COPS7B-220ENST00000479430 TICRRQ7Z2Z1 1910 aa4.56□□□□□ -1.68
COPS7B-220ENST00000479430 PLIN4Q96Q06 1357 aa4.55□□□□□ -1.68
COPS7B-220ENST00000479430 A0A087X0B3 334 aa4.55□□□□□ -1.68
COPS7B-220ENST00000479430 TBKBP1A7MCY6 615 aa4.55□□□□□ -1.68
COPS7B-220ENST00000479430 MEIS3P2A8K0S8 358 aa4.55□□□□□ -1.68
COPS7B-220ENST00000479430 CHURC1-FNTBB4DL54 471 aa4.55□□□□□ -1.68
COPS7B-220ENST00000479430 C5orf67F2Z3F1 127 aa4.55□□□□□ -1.68
COPS7B-220ENST00000479430 PPP1R11O60927 126 aaPredicted RBP4.55□□□□□ -1.68
COPS7B-220ENST00000479430 DGKIO75912 1065 aa4.55□□□□□ -1.68
COPS7B-220ENST00000479430 FGFR1P11362 822 aa4.55□□□□□ -1.68
COPS7B-220ENST00000479430 NME1P15531 152 aaKnown RBP4.55□□□□□ -1.68
COPS7B-220ENST00000479430 HOXC13P31276 330 aa4.55□□□□□ -1.68
COPS7B-220ENST00000479430 SMCPP49901 116 aaPredicted RBP4.55□□□□□ -1.68
COPS7B-220ENST00000479430 ZNF543Q08ER8 600 aa4.55□□□□□ -1.68
COPS7B-220ENST00000479430 MGAT3Q09327 533 aa4.55□□□□□ -1.68
COPS7B-220ENST00000479430 STXBP2Q15833 593 aa4.55□□□□□ -1.68
COPS7B-220ENST00000479430 LPAL2Q16609 132 aa4.55□□□□□ -1.68
COPS7B-220ENST00000479430 ST3GAL2Q16842 350 aa4.55□□□□□ -1.68
COPS7B-220ENST00000479430 SLC35G1Q2M3R5 365 aa4.55□□□□□ -1.68
COPS7B-220ENST00000479430 QRICH1Q2TAL8 776 aa4.55□□□□□ -1.68
COPS7B-220ENST00000479430 TM4SF20Q53R12 229 aa4.55□□□□□ -1.68
COPS7B-220ENST00000479430 WIPI1Q5MNZ9 446 aaPredicted RBP4.55□□□□□ -1.68
COPS7B-220ENST00000479430 CELF3Q5SZQ8 465 aaKnown RBP4.55□□□□□ -1.68
COPS7B-220ENST00000479430 C20orf194Q5TEA3 1177 aa4.55□□□□□ -1.68
COPS7B-220ENST00000479430 OVOS1Q6IE37 1185 aa4.55□□□□□ -1.68
COPS7B-220ENST00000479430 ANKRD54Q6NXT1 300 aa4.55□□□□□ -1.68
COPS7B-220ENST00000479430 BTNL9Q6UXG8 535 aa4.55□□□□□ -1.68
COPS7B-220ENST00000479430 C12orf40Q86WS4 652 aa4.55□□□□□ -1.68
COPS7B-220ENST00000479430 DDX42Q86XP3 938 aaKnown RBP eCLIP4.55□□□□□ -1.68
COPS7B-220ENST00000479430 THNSL2Q86YJ6 484 aa4.55□□□□□ -1.68
COPS7B-220ENST00000479430 ADGRF4Q8IZF3 695 aa4.55□□□□□ -1.68
COPS7B-220ENST00000479430 SYNPOQ8N3V7 929 aa4.55□□□□□ -1.68
COPS7B-220ENST00000479430 KBTBD3Q8NAB2 608 aa4.55□□□□□ -1.68
COPS7B-220ENST00000479430 ZSWIM2Q8NEG5 633 aa4.55□□□□□ -1.68
COPS7B-220ENST00000479430 PPTC7Q8NI37 304 aa4.55□□□□□ -1.68
COPS7B-220ENST00000479430 CYP2W1Q8TAV3 490 aa4.55□□□□□ -1.68
COPS7B-220ENST00000479430 DCAF4Q8WV16 495 aa4.55□□□□□ -1.68
COPS7B-220ENST00000479430 SLC7A3Q8WY07 619 aa4.55□□□□□ -1.68
COPS7B-220ENST00000479430 KLHL6Q8WZ60 621 aa4.55□□□□□ -1.68
COPS7B-220ENST00000479430 SUSD6Q92537 303 aa4.55□□□□□ -1.68
COPS7B-220ENST00000479430 NINJ1Q92982 152 aa4.55□□□□□ -1.68
COPS7B-220ENST00000479430 ZNF669Q96BR6 464 aaPredicted RBP4.55□□□□□ -1.68
COPS7B-220ENST00000479430 WDR89Q96FK6 387 aaPredicted RBP4.55□□□□□ -1.68
COPS7B-220ENST00000479430 CLUHP3Q96NS8 147 aa4.55□□□□□ -1.68
COPS7B-220ENST00000479430 LPIN3Q9BQK8 851 aa4.55□□□□□ -1.68
COPS7B-220ENST00000479430 CCDC86Q9H6F5 360 aaKnown RBP4.55□□□□□ -1.68
COPS7B-220ENST00000479430 MLXIPQ9HAP2 919 aa4.55□□□□□ -1.68
COPS7B-220ENST00000479430 ERVK-5Q9HDB9 667 aa4.55□□□□□ -1.68
COPS7B-220ENST00000479430 TYW1Q9NV66 732 aaKnown RBP4.55□□□□□ -1.68
COPS7B-220ENST00000479430 SLC6A14Q9UN76 642 aa4.55□□□□□ -1.68
COPS7B-220ENST00000479430 PDCD11Q14690 1871 aaKnown RBP4.55□□□□□ -1.68
COPS7B-220ENST00000479430 UNC79Q9P2D8 2635 aa4.55□□□□□ -1.68
COPS7B-220ENST00000479430 TRIP11Q15643 1979 aa4.54□□□□□ -1.68
COPS7B-220ENST00000479430 TDRD15B5MCY1 1934 aaKnown RBP4.54□□□□□ -1.68
COPS7B-220ENST00000479430 CHD6Q8TD26 2715 aa4.54□□□□□ -1.68
COPS7B-220ENST00000479430 NEDD4P46934 1319 aa4.54□□□□□ -1.68
COPS7B-220ENST00000479430 EMSYQ7Z589 1322 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms