RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 KIAA1841Q6NSI8 718 aa12.5□□□□□ -0.41
NUDCD3-206ENST00000475952 CES5AQ6NT32 575 aa12.5□□□□□ -0.41
NUDCD3-206ENST00000475952 FUT10Q6P4F1 479 aa12.5□□□□□ -0.41
NUDCD3-206ENST00000475952 GPBP1Q86WP2 473 aa12.5□□□□□ -0.41
NUDCD3-206ENST00000475952 LARP4BQ92615 738 aaKnown RBP12.5□□□□□ -0.41
NUDCD3-206ENST00000475952 ACO2Q99798 780 aaKnown RBP12.5□□□□□ -0.41
NUDCD3-206ENST00000475952 CCDC94Q9BW85 323 aaPredicted RBP12.5□□□□□ -0.41
NUDCD3-206ENST00000475952 IRF2BPLQ9H1B7 796 aa12.5□□□□□ -0.41
NUDCD3-206ENST00000475952 TOPORSQ9NS56 1045 aaPredicted RBP12.5□□□□□ -0.41
NUDCD3-206ENST00000475952 MTMR6Q9Y217 621 aa12.5□□□□□ -0.41
NUDCD3-206ENST00000475952 CLIC4Q9Y696 253 aa12.5□□□□□ -0.41
NUDCD3-206ENST00000475952 SF3B1O75533 1304 aaKnown RBP eCLIP12.49□□□□□ -0.412e-15■■■■■ 361.9
NUDCD3-206ENST00000475952 PRR23AA6NEV1 266 aa12.49□□□□□ -0.41
NUDCD3-206ENST00000475952 SFI1A8K8P3 1242 aa12.49□□□□□ -0.41
NUDCD3-206ENST00000475952 C2CD2LO14523 706 aa12.49□□□□□ -0.41
NUDCD3-206ENST00000475952 PTGESO14684 152 aa12.49□□□□□ -0.41
NUDCD3-206ENST00000475952 KLRC2P26717 231 aa12.49□□□□□ -0.41
NUDCD3-206ENST00000475952 CACNB1Q02641 598 aaPredicted RBP12.49□□□□□ -0.41
NUDCD3-206ENST00000475952 ITIH3Q06033 890 aa12.49□□□□□ -0.41
NUDCD3-206ENST00000475952 DHX8Q14562 1220 aaKnown RBP12.49□□□□□ -0.41
NUDCD3-206ENST00000475952 HSP90AA2PQ14568 343 aaPredicted RBP12.49□□□□□ -0.41
NUDCD3-206ENST00000475952 PTPAQ15257 358 aa12.49□□□□□ -0.41
NUDCD3-206ENST00000475952 SYCE2Q6PIF2 218 aa12.49□□□□□ -0.41
NUDCD3-206ENST00000475952 RNF168Q8IYW5 571 aaPredicted RBP12.49□□□□□ -0.41
NUDCD3-206ENST00000475952 SUSD6Q92537 303 aa12.49□□□□□ -0.41
NUDCD3-206ENST00000475952 RAD54LQ92698 747 aa12.49□□□□□ -0.41
NUDCD3-206ENST00000475952 NECTIN4Q96NY8 510 aa12.49□□□□□ -0.41
NUDCD3-206ENST00000475952 KLHL5Q96PQ7 755 aa12.49□□□□□ -0.41
NUDCD3-206ENST00000475952 REEP2Q9BRK0 252 aa12.49□□□□□ -0.41
NUDCD3-206ENST00000475952 NTPCRQ9BSD7 190 aaKnown RBP12.49□□□□□ -0.41
NUDCD3-206ENST00000475952 TCHPQ9BT92 498 aa12.49□□□□□ -0.41
NUDCD3-206ENST00000475952 PHF7Q9BWX1 381 aaPredicted RBP12.49□□□□□ -0.41
NUDCD3-206ENST00000475952 CCSER1Q9C0I3 900 aa12.49□□□□□ -0.41
NUDCD3-206ENST00000475952 CDT1Q9H211 546 aa12.49□□□□□ -0.41
NUDCD3-206ENST00000475952 CCDC39Q9UFE4 941 aa12.49□□□□□ -0.41
NUDCD3-206ENST00000475952 ADAM28Q9UKQ2 775 aa12.49□□□□□ -0.41
NUDCD3-206ENST00000475952 EP300Q09472 2414 aaPredicted RBP12.49□□□□□ -0.41
NUDCD3-206ENST00000475952 TSC2P49815 1807 aa12.48□□□□□ -0.41
NUDCD3-206ENST00000475952 CASTOR2A6NHX0 329 aa12.48□□□□□ -0.41
NUDCD3-206ENST00000475952 TBCAO75347 108 aaKnown RBP12.48□□□□□ -0.41
NUDCD3-206ENST00000475952 TADA2AO75478 443 aa12.48□□□□□ -0.41
NUDCD3-206ENST00000475952 FAM13AO94988 1023 aa12.48□□□□□ -0.41
NUDCD3-206ENST00000475952 PDGFBP01127 241 aaPredicted RBP12.48□□□□□ -0.41
NUDCD3-206ENST00000475952 ADH1AP07327 375 aa12.48□□□□□ -0.41
NUDCD3-206ENST00000475952 CNPP09543 421 aaKnown RBP12.48□□□□□ -0.41
NUDCD3-206ENST00000475952 MCF2P10911 925 aa12.48□□□□□ -0.41
NUDCD3-206ENST00000475952 PDIA4P13667 645 aaKnown RBP12.48□□□□□ -0.41
NUDCD3-206ENST00000475952 EPCAMP16422 314 aa12.48□□□□□ -0.41
NUDCD3-206ENST00000475952 SCP2P22307 547 aa12.48□□□□□ -0.41
NUDCD3-206ENST00000475952 MARCKSP29966 332 aaPredicted RBP12.48□□□□□ -0.41
NUDCD3-206ENST00000475952 GRM5P41594 1212 aa12.48□□□□□ -0.41
NUDCD3-206ENST00000475952 CLCN4P51793 760 aa12.48□□□□□ -0.41
NUDCD3-206ENST00000475952 NCKAP1LP55160 1127 aa12.48□□□□□ -0.41
NUDCD3-206ENST00000475952 DSG1Q02413 1049 aa12.48□□□□□ -0.41
NUDCD3-206ENST00000475952 CREMQ03060 361 aa12.48□□□□□ -0.41
NUDCD3-206ENST00000475952 CEBPZQ03701 1054 aaKnown RBP12.48□□□□□ -0.41
NUDCD3-206ENST00000475952 PTPN21Q16825 1174 aa12.48□□□□□ -0.41
NUDCD3-206ENST00000475952 USP41Q3LFD5 358 aa12.48□□□□□ -0.41
NUDCD3-206ENST00000475952 FAM173BQ6P4H8 233 aa12.48□□□□□ -0.41
NUDCD3-206ENST00000475952 ELMSAN1Q6PJG2 1045 aa12.48□□□□□ -0.41
NUDCD3-206ENST00000475952 MPZL3Q6UWV2 235 aa12.48□□□□□ -0.41
NUDCD3-206ENST00000475952 TAS1R3Q7RTX0 852 aa12.48□□□□□ -0.41
NUDCD3-206ENST00000475952 TMEM161BQ8NDZ6 487 aa12.48□□□□□ -0.41
NUDCD3-206ENST00000475952 RPGRIP1Q96KN7 1286 aa12.48□□□□□ -0.41
NUDCD3-206ENST00000475952 RIPOR3Q96MK2 946 aa12.48□□□□□ -0.41
NUDCD3-206ENST00000475952 TARS2Q9BW92 718 aaKnown RBP12.48□□□□□ -0.41
NUDCD3-206ENST00000475952 APOL5Q9BWW9 433 aa12.48□□□□□ -0.41
NUDCD3-206ENST00000475952 S1PR5Q9H228 398 aa12.48□□□□□ -0.41
NUDCD3-206ENST00000475952 SFXN1Q9H9B4 322 aa12.48□□□□□ -0.41
NUDCD3-206ENST00000475952 PARVGQ9HBI0 331 aa12.48□□□□□ -0.41
NUDCD3-206ENST00000475952 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.48□□□□□ -0.41
NUDCD3-206ENST00000475952 BLOC1S4Q9NUP1 217 aa12.48□□□□□ -0.41
NUDCD3-206ENST00000475952 ANKFY1Q9P2R3 1169 aa12.48□□□□□ -0.41
NUDCD3-206ENST00000475952 FBXO2Q9UK22 296 aaPredicted RBP12.48□□□□□ -0.41
NUDCD3-206ENST00000475952 SRPRBQ9Y5M8 271 aaKnown RBP12.48□□□□□ -0.41
NUDCD3-206ENST00000475952 MORC2Q9Y6X9 1032 aaPredicted RBP12.48□□□□□ -0.41
NUDCD3-206ENST00000475952 NCOR2Q9Y618 2525 aa12.48□□□□□ -0.41
NUDCD3-206ENST00000475952 SCN1AP35498 2009 aa12.47□□□□□ -0.41
NUDCD3-206ENST00000475952 NPHP3-ACAD11A0A0J9YXS1 232 aa12.47□□□□□ -0.41
NUDCD3-206ENST00000475952 F8W810 466 aa12.47□□□□□ -0.41
NUDCD3-206ENST00000475952 K7ENM7 598 aa12.47□□□□□ -0.41
NUDCD3-206ENST00000475952 GALR2O43603 387 aaPredicted RBP12.47□□□□□ -0.41
NUDCD3-206ENST00000475952 LILRB3O75022 631 aa12.47□□□□□ -0.41
NUDCD3-206ENST00000475952 TOM1L1O75674 476 aa12.47□□□□□ -0.41
NUDCD3-206ENST00000475952 EFEMP2O95967 443 aa12.47□□□□□ -0.41
NUDCD3-206ENST00000475952 MAPTP10636 758 aaKnown RBP12.47□□□□□ -0.41
NUDCD3-206ENST00000475952 HARSP12081 509 aaKnown RBP12.47□□□□□ -0.41
NUDCD3-206ENST00000475952 PROZP22891 400 aa12.47□□□□□ -0.41
NUDCD3-206ENST00000475952 ABCD1P33897 745 aa12.47□□□□□ -0.41
NUDCD3-206ENST00000475952 MATR3P43243 847 aaKnown RBP eCLIP12.47□□□□□ -0.41
NUDCD3-206ENST00000475952 ELAVL2Q12926 359 aaKnown RBP12.47□□□□□ -0.41
NUDCD3-206ENST00000475952 MCM6Q14566 821 aa12.47□□□□□ -0.41
NUDCD3-206ENST00000475952 NOLC1Q14978 699 aaKnown RBP eCLIP12.47□□□□□ -0.41
NUDCD3-206ENST00000475952 NAB2Q15742 525 aa12.47□□□□□ -0.41
NUDCD3-206ENST00000475952 ARSHQ5FYA8 562 aa12.47□□□□□ -0.41
NUDCD3-206ENST00000475952 GLRA4Q5JXX5 417 aa12.47□□□□□ -0.41
NUDCD3-206ENST00000475952 ZPBP2Q6X784 338 aa12.47□□□□□ -0.41
NUDCD3-206ENST00000475952 ERMP1Q7Z2K6 904 aa12.47□□□□□ -0.41
NUDCD3-206ENST00000475952 ZBTB33Q86T24 672 aa12.47□□□□□ -0.41
NUDCD3-206ENST00000475952 GPR65Q8IYL9 337 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms