RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 P2RX7Q99572 595 aaKnown RBP6.68□□□□□ -1.34
SDHB-205ENST00000475506 C1orf43Q9BWL3 253 aa6.68□□□□□ -1.34
SDHB-205ENST00000475506 MRPL46Q9H2W6 279 aaKnown RBP6.68□□□□□ -1.34
SDHB-205ENST00000475506 KCNK12Q9HB15 430 aa6.68□□□□□ -1.34
SDHB-205ENST00000475506 ING3Q9NXR8 418 aa6.68□□□□□ -1.34
SDHB-205ENST00000475506 COL20A1Q9P218 1284 aa6.68□□□□□ -1.34
SDHB-205ENST00000475506 MBD1Q9UIS9 605 aaPredicted RBP6.68□□□□□ -1.34
SDHB-205ENST00000475506 FBXO10Q9UK96 956 aa6.68□□□□□ -1.34
SDHB-205ENST00000475506 FOXN3O00409 490 aaPredicted RBP6.67□□□□□ -1.34
SDHB-205ENST00000475506 DDX3XO00571 662 aaKnown RBP eCLIP6.67□□□□□ -1.342e-33■■■■■ 53.1
SDHB-205ENST00000475506 ALDH1A2O94788 518 aa6.67□□□□□ -1.34
SDHB-205ENST00000475506 IGHA1P01876 353 aa6.67□□□□□ -1.34
SDHB-205ENST00000475506 HDCP19113 662 aa6.67□□□□□ -1.34
SDHB-205ENST00000475506 EN2P19622 333 aaPredicted RBP6.67□□□□□ -1.34
SDHB-205ENST00000475506 ARFIP2P53365 341 aa6.67□□□□□ -1.34
SDHB-205ENST00000475506 ADAM15Q13444 863 aa6.67□□□□□ -1.34
SDHB-205ENST00000475506 SMAD4Q13485 552 aaKnown RBP6.67□□□□□ -1.34
SDHB-205ENST00000475506 C3orf38Q5JPI3 329 aa6.67□□□□□ -1.34
SDHB-205ENST00000475506 KHDC1LQ5JSQ8 128 aa6.67□□□□□ -1.34
SDHB-205ENST00000475506 TLDC1Q6P9B6 456 aa6.67□□□□□ -1.34
SDHB-205ENST00000475506 CBLL1Q75N03 491 aa6.67□□□□□ -1.34
SDHB-205ENST00000475506 ATG4DQ86TL0 474 aaPredicted RBP6.67□□□□□ -1.34
SDHB-205ENST00000475506 ZNF354CQ86Y25 554 aa6.67□□□□□ -1.34
SDHB-205ENST00000475506 ZDHHC14Q8IZN3 488 aa6.67□□□□□ -1.34
SDHB-205ENST00000475506 CCDC33Q8N5R6 958 aa6.67□□□□□ -1.34
SDHB-205ENST00000475506 BRI3BPQ8WY22 251 aa6.67□□□□□ -1.34
SDHB-205ENST00000475506 MAML1Q92585 1016 aa6.67□□□□□ -1.34
SDHB-205ENST00000475506 ARL8AQ96BM9 186 aa6.67□□□□□ -1.34
SDHB-205ENST00000475506 MSLNLQ96KJ4 702 aa6.67□□□□□ -1.34
SDHB-205ENST00000475506 UHRF1Q96T88 793 aaPredicted RBP6.67□□□□□ -1.34
SDHB-205ENST00000475506 TTLL2Q9BWV7 592 aa6.67□□□□□ -1.34
SDHB-205ENST00000475506 WDCPQ9H6R7 721 aa6.67□□□□□ -1.34
SDHB-205ENST00000475506 PNPLA8Q9NP80 782 aa6.67□□□□□ -1.34
SDHB-205ENST00000475506 GPRC5DQ9NZD1 345 aa6.67□□□□□ -1.34
SDHB-205ENST00000475506 FEZ2Q9UHY8 353 aaPredicted RBP6.67□□□□□ -1.34
SDHB-205ENST00000475506 ACTL7AQ9Y615 435 aa6.67□□□□□ -1.34
SDHB-205ENST00000475506 A0A1W2PPC4 97 aa6.66□□□□□ -1.34
SDHB-205ENST00000475506 APOL1O14791 398 aa6.66□□□□□ -1.34
SDHB-205ENST00000475506 TLR5O60602 858 aa6.66□□□□□ -1.34
SDHB-205ENST00000475506 GPR32O75388 356 aa6.66□□□□□ -1.34
SDHB-205ENST00000475506 ITGA10O75578 1167 aa6.66□□□□□ -1.34
SDHB-205ENST00000475506 CHGBP05060 677 aa6.66□□□□□ -1.34
SDHB-205ENST00000475506 PARP1P09874 1014 aaKnown RBP6.66□□□□□ -1.34
SDHB-205ENST00000475506 CD53P19397 219 aa6.66□□□□□ -1.34
SDHB-205ENST00000475506 SMARCA1P28370 1054 aa6.66□□□□□ -1.34
SDHB-205ENST00000475506 GRK6P43250 576 aa6.66□□□□□ -1.34
SDHB-205ENST00000475506 HSPA7P48741 367 aa6.66□□□□□ -1.34
SDHB-205ENST00000475506 MAPK10P53779 464 aa6.66□□□□□ -1.34
SDHB-205ENST00000475506 EPHB3P54753 998 aa6.66□□□□□ -1.34
SDHB-205ENST00000475506 FOXO4P98177 505 aa6.66□□□□□ -1.34
SDHB-205ENST00000475506 ELF2Q15723 593 aa6.66□□□□□ -1.34
SDHB-205ENST00000475506 MPEG1Q2M385 716 aa6.66□□□□□ -1.34
SDHB-205ENST00000475506 PRR31Q5SQ13 230 aa6.66□□□□□ -1.34
SDHB-205ENST00000475506 GJC2Q5T442 439 aaPredicted RBP6.66□□□□□ -1.34
SDHB-205ENST00000475506 MYCT1Q8N699 235 aa6.66□□□□□ -1.34
SDHB-205ENST00000475506 NUDT10Q8NFP7 164 aa6.66□□□□□ -1.34
SDHB-205ENST00000475506 NUDT11Q96G61 164 aa6.66□□□□□ -1.34
SDHB-205ENST00000475506 TMEM41AQ96HV5 264 aa6.66□□□□□ -1.34
SDHB-205ENST00000475506 ZC3H10Q96K80 434 aaKnown RBP6.66□□□□□ -1.34
SDHB-205ENST00000475506 NAP1L4Q99733 375 aaKnown RBP6.66□□□□□ -1.34
SDHB-205ENST00000475506 COLEC11Q9BWP8 271 aa6.66□□□□□ -1.34
SDHB-205ENST00000475506 TRIM54Q9BYV2 358 aa6.66□□□□□ -1.34
SDHB-205ENST00000475506 PCDH18Q9HCL0 1135 aa6.66□□□□□ -1.34
SDHB-205ENST00000475506 LANCL2Q9NS86 450 aa6.66□□□□□ -1.34
SDHB-205ENST00000475506 SIRT5Q9NXA8 310 aa6.66□□□□□ -1.34
SDHB-205ENST00000475506 LZTS1Q9Y250 596 aa6.66□□□□□ -1.34
SDHB-205ENST00000475506 GPR52Q9Y2T5 361 aa6.66□□□□□ -1.34
SDHB-205ENST00000475506 ZNF503-AS2A6NEH8 195 aa6.65□□□□□ -1.34
SDHB-205ENST00000475506 PRSS29PA6NIE9 313 aa6.65□□□□□ -1.34
SDHB-205ENST00000475506 ADAMTS3O15072 1205 aa6.65□□□□□ -1.34
SDHB-205ENST00000475506 SBK3P0C264 359 aa6.65□□□□□ -1.34
SDHB-205ENST00000475506 POLD1P28340 1107 aa6.65□□□□□ -1.34
SDHB-205ENST00000475506 CRHR1P34998 444 aa6.65□□□□□ -1.34
SDHB-205ENST00000475506 TECP42680 631 aa6.65□□□□□ -1.34
SDHB-205ENST00000475506 ETV4P43268 484 aa6.65□□□□□ -1.34
SDHB-205ENST00000475506 LIMS1P48059 325 aa6.65□□□□□ -1.34
SDHB-205ENST00000475506 CTXN1P60606 82 aa6.65□□□□□ -1.34
SDHB-205ENST00000475506 PUM3Q15397 648 aaKnown RBP6.65□□□□□ -1.34
SDHB-205ENST00000475506 PDCD2Q16342 344 aaPredicted RBP6.65□□□□□ -1.34
SDHB-205ENST00000475506 SLC35G1Q2M3R5 365 aa6.65□□□□□ -1.34
SDHB-205ENST00000475506 ZSWIM9Q86XI8 627 aa6.65□□□□□ -1.34
SDHB-205ENST00000475506 MZB1Q8WU39 189 aa6.65□□□□□ -1.34
SDHB-205ENST00000475506 CCT6BQ92526 530 aa6.65□□□□□ -1.34
SDHB-205ENST00000475506 ZBTB8AQ96BR9 441 aa6.65□□□□□ -1.34
SDHB-205ENST00000475506 C18orf8Q96DM3 657 aa6.65□□□□□ -1.34
SDHB-205ENST00000475506 WRNIP1Q96S55 665 aa6.65□□□□□ -1.34
SDHB-205ENST00000475506 SENP6Q9GZR1 1112 aaPredicted RBP6.65□□□□□ -1.34
SDHB-205ENST00000475506 KATNBL1Q9H079 304 aa6.65□□□□□ -1.34
SDHB-205ENST00000475506 AGO4Q9HCK5 861 aaKnown RBP6.65□□□□□ -1.34
SDHB-205ENST00000475506 SARS2Q9NP81 518 aaKnown RBP6.65□□□□□ -1.34
SDHB-205ENST00000475506 PIH1D1Q9NWS0 290 aaKnown RBP6.65□□□□□ -1.34
SDHB-205ENST00000475506 C9orf78Q9NZ63 289 aaPredicted RBP6.65□□□□□ -1.34
SDHB-205ENST00000475506 VWA7Q9Y334 891 aa6.65□□□□□ -1.34
SDHB-205ENST00000475506 ATRNL1Q5VV63 1379 aa6.65□□□□□ -1.35
SDHB-205ENST00000475506 MATN4O95460 622 aa6.64□□□□□ -1.35
SDHB-205ENST00000475506 HMGCRP04035 888 aa6.64□□□□□ -1.35
SDHB-205ENST00000475506 FTH1P19P0C7X4 201 aa6.64□□□□□ -1.35
SDHB-205ENST00000475506 SRGNP10124 158 aa6.64□□□□□ -1.35
SDHB-205ENST00000475506 PDIA3P30101 505 aaKnown RBP6.64□□□□□ -1.35
SDHB-205ENST00000475506 WNT3AP56704 352 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms