RNA–Protein interactions for RNA: ENST00000475307.1

GPM6B-208, Transcript of glycoprotein M6B, humanhuman

TSL 3

Gene GPM6B, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-208ENST00000475307 REEP2Q9BRK0 252 aa12.57□□□□□ -0.4
GPM6B-208ENST00000475307 MAN1C1Q9NR34 630 aa12.57□□□□□ -0.4
GPM6B-208ENST00000475307 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.57□□□□□ -0.4
GPM6B-208ENST00000475307 DPP7Q9UHL4 492 aa12.57□□□□□ -0.4
GPM6B-208ENST00000475307 ODF2LQ9ULJ1 636 aa12.57□□□□□ -0.4
GPM6B-208ENST00000475307 TTC28Q96AY4 2481 aa12.56□□□□□ -0.4
GPM6B-208ENST00000475307 BRWD1Q9NSI6 2320 aa12.56□□□□□ -0.4
GPM6B-208ENST00000475307 SMIM28A0A1B0GU29 152 aa12.56□□□□□ -0.4
GPM6B-208ENST00000475307 TOM1L1O75674 476 aa12.56□□□□□ -0.4
GPM6B-208ENST00000475307 FAM13AO94988 1023 aa12.56□□□□□ -0.4
GPM6B-208ENST00000475307 PROZP22891 400 aa12.56□□□□□ -0.4
GPM6B-208ENST00000475307 MATR3P43243 847 aaKnown RBP eCLIP12.56□□□□□ -0.4
GPM6B-208ENST00000475307 ELAVL2Q12926 359 aaKnown RBP12.56□□□□□ -0.4
GPM6B-208ENST00000475307 MCM6Q14566 821 aa12.56□□□□□ -0.4
GPM6B-208ENST00000475307 PTPAQ15257 358 aa12.56□□□□□ -0.4
GPM6B-208ENST00000475307 SPECC1Q5M775 1068 aa12.56□□□□□ -0.4
GPM6B-208ENST00000475307 RTP2Q5QGT7 225 aa12.56□□□□□ -0.4
GPM6B-208ENST00000475307 FAM171A1Q5VUB5 890 aa12.56□□□□□ -0.4
GPM6B-208ENST00000475307 PRSS55Q6UWB4 352 aaPredicted RBP12.56□□□□□ -0.4
GPM6B-208ENST00000475307 GPR149Q86SP6 731 aa12.56□□□□□ -0.4
GPM6B-208ENST00000475307 CEP57Q86XR8 500 aa12.56□□□□□ -0.4
GPM6B-208ENST00000475307 GLYCTKQ8IVS8 523 aa12.56□□□□□ -0.4
GPM6B-208ENST00000475307 GPR65Q8IYL9 337 aa12.56□□□□□ -0.4
GPM6B-208ENST00000475307 MYCT1Q8N699 235 aa12.56□□□□□ -0.4
GPM6B-208ENST00000475307 LARP4BQ92615 738 aaKnown RBP12.56□□□□□ -0.4
GPM6B-208ENST00000475307 EDAQ92838 391 aa12.56□□□□□ -0.4
GPM6B-208ENST00000475307 BICD1Q96G01 975 aa12.56□□□□□ -0.4
GPM6B-208ENST00000475307 EPSTI1Q96J88 318 aa12.56□□□□□ -0.4
GPM6B-208ENST00000475307 ZBTB45Q96K62 511 aaPredicted RBP12.56□□□□□ -0.4
GPM6B-208ENST00000475307 PPP1R10Q96QC0 940 aaKnown RBP12.56□□□□□ -0.4
GPM6B-208ENST00000475307 TTPALQ9BTX7 342 aa12.56□□□□□ -0.4
GPM6B-208ENST00000475307 CCSER1Q9C0I3 900 aa12.56□□□□□ -0.4
GPM6B-208ENST00000475307 ZHX3Q9H4I2 956 aa12.56□□□□□ -0.4
GPM6B-208ENST00000475307 BLOC1S4Q9NUP1 217 aa12.56□□□□□ -0.4
GPM6B-208ENST00000475307 ANKFY1Q9P2R3 1169 aa12.56□□□□□ -0.4
GPM6B-208ENST00000475307 CCDC39Q9UFE4 941 aa12.56□□□□□ -0.4
GPM6B-208ENST00000475307 MTMR6Q9Y217 621 aa12.56□□□□□ -0.4
GPM6B-208ENST00000475307 HCN4Q9Y3Q4 1203 aa12.56□□□□□ -0.4
GPM6B-208ENST00000475307 C2CD4DB7Z1M9 353 aa12.55□□□□□ -0.4
GPM6B-208ENST00000475307 STX6O43752 255 aa12.55□□□□□ -0.4
GPM6B-208ENST00000475307 TBCAO75347 108 aaKnown RBP12.55□□□□□ -0.4
GPM6B-208ENST00000475307 B3GAT3O94766 335 aa12.55□□□□□ -0.4
GPM6B-208ENST00000475307 BRD1O95696 1058 aa12.55□□□□□ -0.4
GPM6B-208ENST00000475307 SPATA31D3P0C874 917 aa12.55□□□□□ -0.4
GPM6B-208ENST00000475307 RPL17P18621 184 aaKnown RBP12.55□□□□□ -0.4
GPM6B-208ENST00000475307 TXLNAP40222 546 aa12.55□□□□□ -0.4
GPM6B-208ENST00000475307 CLCNKBP51801 687 aa12.55□□□□□ -0.4
GPM6B-208ENST00000475307 NCKAP1LP55160 1127 aa12.55□□□□□ -0.4
GPM6B-208ENST00000475307 DCLRE1AQ6PJP8 1040 aa12.55□□□□□ -0.4
GPM6B-208ENST00000475307 ZPBP2Q6X784 338 aa12.55□□□□□ -0.4
GPM6B-208ENST00000475307 SPATA31D4Q6ZUB0 917 aa12.55□□□□□ -0.4
GPM6B-208ENST00000475307 HAUS6Q7Z4H7 955 aa12.55□□□□□ -0.4
GPM6B-208ENST00000475307 LRRC15Q8TF66 581 aa12.55□□□□□ -0.4
GPM6B-208ENST00000475307 SNX21Q969T3 373 aa12.55□□□□□ -0.4
GPM6B-208ENST00000475307 UROC1Q96N76 676 aa12.55□□□□□ -0.4
GPM6B-208ENST00000475307 ZSCAN16Q9H4T2 348 aaPredicted RBP12.55□□□□□ -0.4
GPM6B-208ENST00000475307 PARVGQ9HBI0 331 aa12.55□□□□□ -0.4
GPM6B-208ENST00000475307 SLC38A7Q9NVC3 462 aa12.55□□□□□ -0.4
GPM6B-208ENST00000475307 FNIP2Q9P278 1114 aa12.55□□□□□ -0.4
GPM6B-208ENST00000475307 FBXO2Q9UK22 296 aaPredicted RBP12.55□□□□□ -0.4
GPM6B-208ENST00000475307 SRPRBQ9Y5M8 271 aaKnown RBP12.55□□□□□ -0.4
GPM6B-208ENST00000475307 CCDC195A0A1B0GUA6 201 aa12.54□□□□□ -0.4
GPM6B-208ENST00000475307 K7ENM7 598 aa12.54□□□□□ -0.4
GPM6B-208ENST00000475307 ABLIM1O14639 778 aa12.54□□□□□ -0.4
GPM6B-208ENST00000475307 CLDN3O15551 220 aa12.54□□□□□ -0.4
GPM6B-208ENST00000475307 TGM5O43548 720 aa12.54□□□□□ -0.4
GPM6B-208ENST00000475307 TRAK2O60296 914 aa12.54□□□□□ -0.4
GPM6B-208ENST00000475307 DDIT3P35638 169 aa12.54□□□□□ -0.4
GPM6B-208ENST00000475307 LIG4P49917 911 aa12.54□□□□□ -0.4
GPM6B-208ENST00000475307 ZXDAP98168 799 aa12.54□□□□□ -0.4
GPM6B-208ENST00000475307 NOLC1Q14978 699 aaKnown RBP eCLIP12.54□□□□□ -0.4
GPM6B-208ENST00000475307 PSMD5Q16401 504 aa12.54□□□□□ -0.4
GPM6B-208ENST00000475307 SEZ6Q53EL9 994 aa12.54□□□□□ -0.4
GPM6B-208ENST00000475307 XKR4Q5GH76 650 aa12.54□□□□□ -0.4
GPM6B-208ENST00000475307 PDXDC1Q6P996 788 aa12.54□□□□□ -0.4
GPM6B-208ENST00000475307 C15orf39Q6ZRI6 1047 aa12.54□□□□□ -0.4
GPM6B-208ENST00000475307 CCDC149Q6ZUS6 474 aa12.54□□□□□ -0.4
GPM6B-208ENST00000475307 USP49Q70CQ1 688 aa12.54□□□□□ -0.4
GPM6B-208ENST00000475307 HSCBQ8IWL3 235 aa12.54□□□□□ -0.4
GPM6B-208ENST00000475307 TDRD5Q8NAT2 981 aaKnown RBP12.54□□□□□ -0.4
GPM6B-208ENST00000475307 CMASQ8NFW8 434 aaPredicted RBP12.54□□□□□ -0.4
GPM6B-208ENST00000475307 FEZF2Q8TBJ5 459 aa12.54□□□□□ -0.4
GPM6B-208ENST00000475307 HDAC7Q8WUI4 952 aa12.54□□□□□ -0.4
GPM6B-208ENST00000475307 PIK3R5Q8WYR1 880 aa12.54□□□□□ -0.4
GPM6B-208ENST00000475307 DDX27Q96GQ7 796 aaKnown RBP12.54□□□□□ -0.4
GPM6B-208ENST00000475307 SNX27Q96L92 541 aa12.54□□□□□ -0.4
GPM6B-208ENST00000475307 CLIC6Q96NY7 704 aa12.54□□□□□ -0.4
GPM6B-208ENST00000475307 USP28Q96RU2 1077 aa12.54□□□□□ -0.4
GPM6B-208ENST00000475307 GOLGA2P5Q9HBQ8 144 aa12.54□□□□□ -0.4
GPM6B-208ENST00000475307 TDRD15B5MCY1 1934 aaKnown RBP12.54□□□□□ -0.4
GPM6B-208ENST00000475307 TMEM189-UBE2V1I3L0A0 370 aa12.53□□□□□ -0.4
GPM6B-208ENST00000475307 TRAPPC3O43617 180 aa12.53□□□□□ -0.4
GPM6B-208ENST00000475307 RFPL2O75678 378 aa12.53□□□□□ -0.4
GPM6B-208ENST00000475307 C1RP00736 705 aa12.53□□□□□ -0.4
GPM6B-208ENST00000475307 HSP90AA1P07900 732 aaKnown RBP12.53□□□□□ -0.4
GPM6B-208ENST00000475307 KCNE1P15382 129 aa12.53□□□□□ -0.4
GPM6B-208ENST00000475307 SCP2P22307 547 aa12.53□□□□□ -0.4
GPM6B-208ENST00000475307 IGFBP6P24592 240 aaPredicted RBP12.53□□□□□ -0.4
GPM6B-208ENST00000475307 ZNF131P52739 623 aa12.53□□□□□ -0.4
GPM6B-208ENST00000475307 SOX4Q06945 474 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms