RNA–Protein interactions for RNA: ENST00000475158.1

CDH23-211, Transcript of cadherin related 23, humanhuman

TSL 1 (best)

Gene CDH23, Length 4,114 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-211ENST00000475158 KCNA1Q09470 495 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 SEMA3FQ13275 785 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 TSTA3Q13630 321 aaPredicted RBP10.22□□□□□ -0.77
CDH23-211ENST00000475158 NAB2Q15742 525 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 DUOXA2Q1HG44 320 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 IZUMO3Q5VZ72 239 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 PDZD4Q76G19 769 aaPredicted RBP10.22□□□□□ -0.77
CDH23-211ENST00000475158 GBP7Q8N8V2 638 aaPredicted RBP10.22□□□□□ -0.77
CDH23-211ENST00000475158 AGR3Q8TD06 166 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 ZIM3Q96PE6 472 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 SLC40A1Q9NP59 571 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 WDR70Q9NW82 654 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 URB1O60287 2271 aaKnown RBP10.22□□□□□ -0.77
CDH23-211ENST00000475158 ESYT2A0FGR8 921 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 MYL3P08590 195 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 CUL3Q13618 768 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 SLC12A1Q13621 1099 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 RFX8Q6ZV50 586 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 NLRP14Q86W24 1093 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 SCN4BQ8IWT1 228 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 SYT2Q8N9I0 419 aaPredicted RBP10.22□□□□□ -0.77
CDH23-211ENST00000475158 ZNF280CQ8ND82 737 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 EXT2Q93063 718 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 CYTH2Q99418 400 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 SIK2Q9H0K1 926 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 UNC45AQ9H3U1 944 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 DHX35Q9H5Z1 703 aaKnown RBP10.22□□□□□ -0.77
CDH23-211ENST00000475158 BCL9O00512 1426 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 MYOM1P52179 1685 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 CNTRLQ7Z7A1 2325 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 GMNCA6NCL1 334 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 EIF3HO15372 352 aaKnown RBP eCLIP10.22□□□□□ -0.77
CDH23-211ENST00000475158 GPC4O75487 556 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 GMNNO75496 209 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 NCF2P19878 526 aaPredicted RBP10.22□□□□□ -0.77
CDH23-211ENST00000475158 ARSEP51690 589 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 HERVK_113P62684 666 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 KYNUQ16719 465 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 TRIM65Q6PJ69 517 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 KDELC2Q7Z4H8 507 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 ATG4AQ8WYN0 398 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 KIF12Q96FN5 646 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 IFT122Q9HBG6 1241 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 BATF3Q9NR55 127 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 TACC3Q9Y6A5 838 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 KIF20BQ96Q89 1820 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 CFLARO15519 480 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 DGAT1O75907 488 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 PDGFRBP09619 1106 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 RARBP10826 455 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 SHMT1P34896 483 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 TMPRSS15P98073 1019 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 CACNB2Q08289 660 aaPredicted RBP10.22□□□□□ -0.77
CDH23-211ENST00000475158 ASPHQ12797 758 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 NME3Q13232 169 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 NCOA4Q13772 614 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.22□□□□□ -0.77
CDH23-211ENST00000475158 KIAA1755Q5JYT7 1200 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 CENPPQ6IPU0 288 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 RHOT1Q8IXI2 618 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.22□□□□□ -0.77
CDH23-211ENST00000475158 AKT1S1Q96B36 256 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 MTMR8Q96EF0 704 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 DDX23Q9BUQ8 820 aaKnown RBP10.22□□□□□ -0.77
CDH23-211ENST00000475158 MRPL4Q9BYD3 311 aaKnown RBP10.22□□□□□ -0.77
CDH23-211ENST00000475158 MYOZ2Q9NPC6 264 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 TOPORSQ9NS56 1045 aaPredicted RBP10.22□□□□□ -0.77
CDH23-211ENST00000475158 FAM49BQ9NUQ9 324 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 FBXO40Q9UH90 709 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 SNX9Q9Y5X1 595 aa10.22□□□□□ -0.77
CDH23-211ENST00000475158 LRRIQ3A6PVS8 624 aaPredicted RBP10.21□□□□□ -0.77
CDH23-211ENST00000475158 WDR46O15213 610 aaKnown RBP10.21□□□□□ -0.77
CDH23-211ENST00000475158 SDC4P31431 198 aa10.21□□□□□ -0.77
CDH23-211ENST00000475158 CHRNA3P32297 505 aa10.21□□□□□ -0.77
CDH23-211ENST00000475158 MFSD4BQ5TF39 518 aa10.21□□□□□ -0.77
CDH23-211ENST00000475158 SPOPLQ6IQ16 392 aa10.21□□□□□ -0.77
CDH23-211ENST00000475158 MDM1Q8TC05 714 aa10.21□□□□□ -0.77
CDH23-211ENST00000475158 HDAC7Q8WUI4 952 aa10.21□□□□□ -0.77
CDH23-211ENST00000475158 HDAC11Q96DB2 347 aa10.21□□□□□ -0.77
CDH23-211ENST00000475158 ZMAT2Q96NC0 199 aaKnown RBP10.21□□□□□ -0.77
CDH23-211ENST00000475158 RAB3IPQ96QF0 476 aaPredicted RBP10.21□□□□□ -0.77
CDH23-211ENST00000475158 CNOT10Q9H9A5 744 aaKnown RBP10.21□□□□□ -0.77
CDH23-211ENST00000475158 HPCAL4Q9UM19 191 aa10.21□□□□□ -0.77
CDH23-211ENST00000475158 AGAP1Q9UPQ3 857 aa10.21□□□□□ -0.77
CDH23-211ENST00000475158 RASSF10A6NK89 507 aa10.21□□□□□ -0.78
CDH23-211ENST00000475158 A8MXQ7 604 aa10.21□□□□□ -0.78
CDH23-211ENST00000475158 MOCS2O96007 188 aaPredicted RBP10.21□□□□□ -0.78
CDH23-211ENST00000475158 HLA-DRAP01903 254 aa10.21□□□□□ -0.78
CDH23-211ENST00000475158 PRKCBP05771 671 aa10.21□□□□□ -0.78
CDH23-211ENST00000475158 PON1P27169 355 aa10.21□□□□□ -0.78
CDH23-211ENST00000475158 PHKA2P46019 1235 aa10.21□□□□□ -0.78
CDH23-211ENST00000475158 BCAR1P56945 870 aa10.21□□□□□ -0.78
CDH23-211ENST00000475158 LAMB3Q13751 1172 aa10.21□□□□□ -0.78
CDH23-211ENST00000475158 GIT2Q14161 759 aa10.21□□□□□ -0.78
CDH23-211ENST00000475158 XKR3Q5GH77 459 aa10.21□□□□□ -0.78
CDH23-211ENST00000475158 ARMCX6Q7L4S7 300 aa10.21□□□□□ -0.78
CDH23-211ENST00000475158 EPM2AIP1Q7L775 607 aaPredicted RBP10.21□□□□□ -0.78
CDH23-211ENST00000475158 C4orf33Q8N1A6 199 aa10.21□□□□□ -0.78
CDH23-211ENST00000475158 CCDC33Q8N5R6 958 aa10.21□□□□□ -0.78
CDH23-211ENST00000475158 DHX38Q92620 1227 aaKnown RBP10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms