RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 ADAM28Q9UKQ2 775 aa10.36□□□□□ -0.75
PDPN-204ENST00000475043 SSX2IPQ9Y2D8 614 aa10.36□□□□□ -0.75
PDPN-204ENST00000475043 RBM19Q9Y4C8 960 aaKnown RBP10.36□□□□□ -0.75
PDPN-204ENST00000475043 TTC28Q96AY4 2481 aa10.36□□□□□ -0.75
PDPN-204ENST00000475043 ZMYM2Q9UBW7 1377 aa10.36□□□□□ -0.75
PDPN-204ENST00000475043 PLXNA3P51805 1871 aa10.36□□□□□ -0.75
PDPN-204ENST00000475043 NPHP3-ACAD11A0A0J9YXS1 232 aa10.35□□□□□ -0.75
PDPN-204ENST00000475043 CASTOR2A6NHX0 329 aa10.35□□□□□ -0.75
PDPN-204ENST00000475043 K7ELQ4 463 aaPredicted RBP10.35□□□□□ -0.75
PDPN-204ENST00000475043 SYT1P21579 422 aa10.35□□□□□ -0.75
PDPN-204ENST00000475043 GUCY2CP25092 1073 aa10.35□□□□□ -0.75
PDPN-204ENST00000475043 LONP1P36776 959 aaKnown RBP10.35□□□□□ -0.75
PDPN-204ENST00000475043 SMTNP53814 917 aa10.35□□□□□ -0.75
PDPN-204ENST00000475043 SLC12A3P55017 1021 aa10.35□□□□□ -0.75
PDPN-204ENST00000475043 OSTNP61366 133 aa10.35□□□□□ -0.75
PDPN-204ENST00000475043 CEBPZQ03701 1054 aaKnown RBP10.35□□□□□ -0.75
PDPN-204ENST00000475043 ITIH3Q06033 890 aa10.35□□□□□ -0.75
PDPN-204ENST00000475043 STRN3Q13033 797 aa10.35□□□□□ -0.75
PDPN-204ENST00000475043 MAPK7Q13164 816 aa10.35□□□□□ -0.75
PDPN-204ENST00000475043 TUSC3Q13454 348 aa10.35□□□□□ -0.75
PDPN-204ENST00000475043 HSP90AA2PQ14568 343 aaPredicted RBP10.35□□□□□ -0.75
PDPN-204ENST00000475043 ZNF568Q3ZCX4 644 aa10.35□□□□□ -0.75
PDPN-204ENST00000475043 KANK3Q6NY19 840 aa10.35□□□□□ -0.75
PDPN-204ENST00000475043 FUT10Q6P4F1 479 aa10.35□□□□□ -0.75
PDPN-204ENST00000475043 ZBTB33Q86T24 672 aa10.35□□□□□ -0.75
PDPN-204ENST00000475043 KCTD17Q8N5Z5 321 aa10.35□□□□□ -0.75
PDPN-204ENST00000475043 HASPINQ8TF76 798 aa10.35□□□□□ -0.75
PDPN-204ENST00000475043 SLC22A17Q8WUG5 538 aa10.35□□□□□ -0.75
PDPN-204ENST00000475043 B3GALT6Q96L58 329 aa10.35□□□□□ -0.75
PDPN-204ENST00000475043 KLHL5Q96PQ7 755 aa10.35□□□□□ -0.75
PDPN-204ENST00000475043 ACO2Q99798 780 aaKnown RBP10.35□□□□□ -0.75
PDPN-204ENST00000475043 PAAF1Q9BRP4 392 aa10.35□□□□□ -0.75
PDPN-204ENST00000475043 HERC2P3Q9BVR0 1158 aa10.35□□□□□ -0.75
PDPN-204ENST00000475043 TARS2Q9BW92 718 aaKnown RBP10.35□□□□□ -0.75
PDPN-204ENST00000475043 MRPL4Q9BYD3 311 aaKnown RBP10.35□□□□□ -0.75
PDPN-204ENST00000475043 CXCL16Q9H2A7 254 aa10.35□□□□□ -0.75
PDPN-204ENST00000475043 ADAM7Q9H2U9 754 aa10.35□□□□□ -0.75
PDPN-204ENST00000475043 TMEM134Q9H6X4 195 aa10.35□□□□□ -0.75
PDPN-204ENST00000475043 DZANK1Q9NVP4 752 aa10.35□□□□□ -0.75
PDPN-204ENST00000475043 ARHGAP28Q9P2N2 729 aa10.35□□□□□ -0.75
PDPN-204ENST00000475043 TNFSF13BQ9Y275 285 aa10.35□□□□□ -0.75
PDPN-204ENST00000475043 CLIC4Q9Y696 253 aa10.35□□□□□ -0.75
PDPN-204ENST00000475043 TRIP11Q15643 1979 aa10.35□□□□□ -0.75
PDPN-204ENST00000475043 BDP1A6H8Y1 2624 aa10.34□□□□□ -0.75
PDPN-204ENST00000475043 LOC730098B7Z3J9 87 aa10.34□□□□□ -0.75
PDPN-204ENST00000475043 PTGESO14684 152 aa10.34□□□□□ -0.75
PDPN-204ENST00000475043 GPR37L1O60883 481 aa10.34□□□□□ -0.75
PDPN-204ENST00000475043 KRT18P05783 430 aaKnown RBP10.34□□□□□ -0.75
PDPN-204ENST00000475043 ADH1AP07327 375 aa10.34□□□□□ -0.75
PDPN-204ENST00000475043 MYBP10242 640 aa10.34□□□□□ -0.75
PDPN-204ENST00000475043 HARSP12081 509 aaKnown RBP10.34□□□□□ -0.75
PDPN-204ENST00000475043 PLS3P13797 630 aa10.34□□□□□ -0.75
PDPN-204ENST00000475043 PLCG1P19174 1290 aa10.34□□□□□ -0.75
PDPN-204ENST00000475043 MARCKSP29966 332 aaPredicted RBP10.34□□□□□ -0.75
PDPN-204ENST00000475043 CLCN4P51793 760 aa10.34□□□□□ -0.75
PDPN-204ENST00000475043 YARSP54577 528 aaKnown RBP10.34□□□□□ -0.75
PDPN-204ENST00000475043 GRIN1Q05586 938 aa10.34□□□□□ -0.75
PDPN-204ENST00000475043 KARSQ15046 597 aaKnown RBP10.34□□□□□ -0.75
PDPN-204ENST00000475043 USP41Q3LFD5 358 aa10.34□□□□□ -0.75
PDPN-204ENST00000475043 TMEM119Q4V9L6 283 aa10.34□□□□□ -0.75
PDPN-204ENST00000475043 GLRA4Q5JXX5 417 aa10.34□□□□□ -0.75
PDPN-204ENST00000475043 FAM173BQ6P4H8 233 aa10.34□□□□□ -0.75
PDPN-204ENST00000475043 TMC5Q6UXY8 1006 aa10.34□□□□□ -0.75
PDPN-204ENST00000475043 GPBP1Q86WP2 473 aa10.34□□□□□ -0.75
PDPN-204ENST00000475043 CEP57Q86XR8 500 aa10.34□□□□□ -0.75
PDPN-204ENST00000475043 GLYCTKQ8IVS8 523 aa10.34□□□□□ -0.75
PDPN-204ENST00000475043 CEP120Q8N960 986 aa10.34□□□□□ -0.75
PDPN-204ENST00000475043 RIN2Q8WYP3 895 aaPredicted RBP10.34□□□□□ -0.75
PDPN-204ENST00000475043 INTS4Q96HW7 963 aaKnown RBP10.34□□□□□ -0.75
PDPN-204ENST00000475043 FBXL18Q96ME1 805 aa10.34□□□□□ -0.75
PDPN-204ENST00000475043 RIPOR3Q96MK2 946 aa10.34□□□□□ -0.75
PDPN-204ENST00000475043 NECTIN4Q96NY8 510 aa10.34□□□□□ -0.75
PDPN-204ENST00000475043 CCDC94Q9BW85 323 aaPredicted RBP10.34□□□□□ -0.75
PDPN-204ENST00000475043 GPR62Q9BZJ7 368 aa10.34□□□□□ -0.75
PDPN-204ENST00000475043 CDT1Q9H211 546 aa10.34□□□□□ -0.75
PDPN-204ENST00000475043 ZHX3Q9H4I2 956 aa10.34□□□□□ -0.75
PDPN-204ENST00000475043 POMKQ9H5K3 350 aa10.34□□□□□ -0.75
PDPN-204ENST00000475043 C11orf16Q9NQ32 467 aa10.34□□□□□ -0.75
PDPN-204ENST00000475043 TOPORSQ9NS56 1045 aaPredicted RBP10.34□□□□□ -0.75
PDPN-204ENST00000475043 KCND2Q9NZV8 630 aa10.34□□□□□ -0.75
PDPN-204ENST00000475043 LARSQ9P2J5 1176 aaKnown RBP10.34□□□□□ -0.75
PDPN-204ENST00000475043 RAPGEFL1Q9UHV5 662 aa10.34□□□□□ -0.75
PDPN-204ENST00000475043 KCNG1Q9UIX4 513 aa10.34□□□□□ -0.75
PDPN-204ENST00000475043 SF3B1O75533 1304 aaKnown RBP eCLIP10.33□□□□□ -0.76
PDPN-204ENST00000475043 MYH15Q9Y2K3 1946 aa10.33□□□□□ -0.76
PDPN-204ENST00000475043 GOLGA8CPA6NN73 597 aa10.33□□□□□ -0.76
PDPN-204ENST00000475043 TEX28O15482 410 aa10.33□□□□□ -0.76
PDPN-204ENST00000475043 SLC26A4O43511 780 aa10.33□□□□□ -0.76
PDPN-204ENST00000475043 LILRB3O75022 631 aa10.33□□□□□ -0.76
PDPN-204ENST00000475043 KIF4AO95239 1232 aa10.33□□□□□ -0.76
PDPN-204ENST00000475043 GRM5P41594 1212 aa10.33□□□□□ -0.76
PDPN-204ENST00000475043 MTHFRP42898 656 aa10.33□□□□□ -0.76
PDPN-204ENST00000475043 MATR3P43243 847 aaKnown RBP eCLIP10.33□□□□□ -0.76
PDPN-204ENST00000475043 DSG1Q02413 1049 aa10.33□□□□□ -0.76
PDPN-204ENST00000475043 RESTQ13127 1097 aa10.33□□□□□ -0.76
PDPN-204ENST00000475043 MCM6Q14566 821 aa10.33□□□□□ -0.76
PDPN-204ENST00000475043 ARSHQ5FYA8 562 aa10.33□□□□□ -0.76
PDPN-204ENST00000475043 SPECC1Q5M775 1068 aa10.33□□□□□ -0.76
PDPN-204ENST00000475043 ATAT1Q5SQI0 421 aa10.33□□□□□ -0.76
PDPN-204ENST00000475043 FAM171A1Q5VUB5 890 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms