RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 DHX38Q92620 1227 aaKnown RBP8.23□□□□□ -1.09
CCDC171-205ENST00000472806 ZKSCAN4Q969J2 545 aaPredicted RBP8.23□□□□□ -1.09
CCDC171-205ENST00000472806 TRIM11Q96F44 468 aa8.23□□□□□ -1.09
CCDC171-205ENST00000472806 BICD1Q96G01 975 aa8.23□□□□□ -1.09
CCDC171-205ENST00000472806 NT5C1BQ96P26 610 aa8.23□□□□□ -1.09
CCDC171-205ENST00000472806 PSMB7Q99436 277 aa8.23□□□□□ -1.09
CCDC171-205ENST00000472806 OCSTAMPQ9BR26 566 aa8.23□□□□□ -1.09
CCDC171-205ENST00000472806 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.23□□□□□ -1.09
CCDC171-205ENST00000472806 CBWD1Q9BRT8 395 aa8.23□□□□□ -1.09
CCDC171-205ENST00000472806 LRRC1Q9BTT6 524 aa8.23□□□□□ -1.09
CCDC171-205ENST00000472806 PACSIN1Q9BY11 444 aa8.23□□□□□ -1.09
CCDC171-205ENST00000472806 SLITRK6Q9H5Y7 841 aa8.23□□□□□ -1.09
CCDC171-205ENST00000472806 POLD4Q9HCU8 107 aa8.23□□□□□ -1.09
CCDC171-205ENST00000472806 UBE2TQ9NPD8 197 aaPredicted RBP8.23□□□□□ -1.09
CCDC171-205ENST00000472806 NRBP2Q9NSY0 501 aa8.23□□□□□ -1.09
CCDC171-205ENST00000472806 SEPT11Q9NVA2 429 aaKnown RBP8.23□□□□□ -1.09
CCDC171-205ENST00000472806 GGA3Q9NZ52 723 aa8.23□□□□□ -1.09
CCDC171-205ENST00000472806 TTC7AQ9ULT0 858 aaPredicted RBP8.23□□□□□ -1.09
CCDC171-205ENST00000472806 HPCAL4Q9UM19 191 aa8.23□□□□□ -1.09
CCDC171-205ENST00000472806 COQ4Q9Y3A0 265 aa8.23□□□□□ -1.09
CCDC171-205ENST00000472806 AFG3L2Q9Y4W6 797 aa8.23□□□□□ -1.09
CCDC171-205ENST00000472806 SMCHD1A6NHR9 2005 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 PARP14Q460N5 1801 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 GOLGA6BA6NDN3 693 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 ZNF233A6NK53 670 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 LRRIQ3A6PVS8 624 aaPredicted RBP8.22□□□□□ -1.09
CCDC171-205ENST00000472806 CEP104O60308 925 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 RTN2O75298 545 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 HEXIM1O94992 359 aaKnown RBP8.22□□□□□ -1.09
CCDC171-205ENST00000472806 UPP2O95045 317 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 GGPS1O95749 300 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 GZMAP12544 262 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 CNGA1P29973 690 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 CYP2C19P33261 490 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 NF2P35240 595 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 IREB2P48200 963 aaKnown RBP8.22□□□□□ -1.09
CCDC171-205ENST00000472806 GCLMP48507 274 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 LIG4P49917 911 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 PDE6CP51160 858 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 GPC3P51654 580 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 POLGP54098 1239 aaPredicted RBP8.22□□□□□ -1.09
CCDC171-205ENST00000472806 BPIFB4P59827 614 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 ACTR2P61160 394 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 GPC5P78333 572 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 PRKCEQ02156 737 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 PPFIA1Q13136 1202 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 NEDD9Q14511 834 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 PPP1R26Q5T8A7 1209 aaPredicted RBP8.22□□□□□ -1.09
CCDC171-205ENST00000472806 PLA2G4FQ68DD2 849 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 C11orf63Q6NUN7 778 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 SWSAP1Q6NVH7 229 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 GJB7Q6PEY0 223 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 ABHD15Q6UXT9 468 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 LEKR1Q6ZMV7 388 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 ANO5Q75V66 913 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 SND1Q7KZF4 910 aaKnown RBP eCLIP8.22□□□□□ -1.09
CCDC171-205ENST00000472806 NT5DC3Q86UY8 548 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 RIOX2Q8IUF8 465 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 GLYCTKQ8IVS8 523 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 ANKRD35Q8N283 1001 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 RASGEF1CQ8N431 466 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 FBXL13Q8NEE6 735 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.22□□□□□ -1.09
CCDC171-205ENST00000472806 LMO3Q8TAP4 145 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 LNX1Q8TBB1 728 aaPredicted RBP8.22□□□□□ -1.09
CCDC171-205ENST00000472806 HES6Q96HZ4 224 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 FAM167AQ96KS9 214 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 MFSD14AQ96MC6 490 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 FBXL18Q96ME1 805 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 RUNDC3BQ96NL0 473 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 SYT11Q9BT88 431 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 PLVAPQ9BX97 442 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 GPR88Q9GZN0 384 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 TMEM117Q9H0C3 514 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 CARD9Q9H257 536 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 BCAS3Q9H6U6 928 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 A1CFQ9NQ94 594 aaKnown RBP8.22□□□□□ -1.09
CCDC171-205ENST00000472806 ZNF302Q9NR11 478 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 GDF3Q9NR23 364 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 CYP26B1Q9NR63 512 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 RBM12Q9NTZ6 932 aaKnown RBP8.22□□□□□ -1.09
CCDC171-205ENST00000472806 CWC15Q9P013 229 aaKnown RBP8.22□□□□□ -1.09
CCDC171-205ENST00000472806 VPS18Q9P253 973 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 STXBP5LQ9Y2K9 1186 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 MAP4K5Q9Y4K4 846 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 RIPK3Q9Y572 518 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 ZNF541Q9H0D2 1346 aa8.22□□□□□ -1.09
CCDC171-205ENST00000472806 LOC102724159A0A0B4J2E5 919 aa8.21□□□□□ -1.1
CCDC171-205ENST00000472806 TTLL8A6PVC2 850 aa8.21□□□□□ -1.1
CCDC171-205ENST00000472806 FOXN3O00409 490 aaPredicted RBP8.21□□□□□ -1.1
CCDC171-205ENST00000472806 HNRNPDLO14979 420 aaKnown RBP8.21□□□□□ -1.1
CCDC171-205ENST00000472806 GAS2O43903 313 aaKnown RBP8.21□□□□□ -1.1
CCDC171-205ENST00000472806 EXTL3O43909 919 aa8.21□□□□□ -1.1
CCDC171-205ENST00000472806 ERLIN2O94905 339 aa8.21□□□□□ -1.1
CCDC171-205ENST00000472806 ATG7O95352 703 aa8.21□□□□□ -1.1
CCDC171-205ENST00000472806 SLC25A27O95847 323 aa8.21□□□□□ -1.1
CCDC171-205ENST00000472806 PIGRP01833 764 aa8.21□□□□□ -1.1
CCDC171-205ENST00000472806 TGFB3P10600 412 aa8.21□□□□□ -1.1
CCDC171-205ENST00000472806 GBP1P32455 592 aa8.21□□□□□ -1.1
CCDC171-205ENST00000472806 NAMPTP43490 491 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms