RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 C4orf19Q8IY42 314 aa10.39□□□□□ -0.75
VCL-204ENST00000472585 PSPC1Q8WXF1 523 aaKnown RBP10.39□□□□□ -0.75
VCL-204ENST00000472585 DDX1Q92499 740 aaKnown RBP10.39□□□□□ -0.75
VCL-204ENST00000472585 DYDC2Q96IM9 177 aa10.39□□□□□ -0.75
VCL-204ENST00000472585 NELL2Q99435 816 aa10.39□□□□□ -0.75
VCL-204ENST00000472585 CLSTN3Q9BQT9 956 aa10.39□□□□□ -0.75
VCL-204ENST00000472585 DDX23Q9BUQ8 820 aaKnown RBP10.39□□□□□ -0.75
VCL-204ENST00000472585 FAM126AQ9BYI3 521 aaPredicted RBP10.39□□□□□ -0.75
VCL-204ENST00000472585 CSRNP2Q9H175 543 aa10.39□□□□□ -0.75
VCL-204ENST00000472585 PARD6AQ9NPB6 346 aa10.39□□□□□ -0.75
VCL-204ENST00000472585 ZDHHC7Q9NXF8 308 aa10.39□□□□□ -0.75
VCL-204ENST00000472585 KLK14Q9P0G3 267 aa10.39□□□□□ -0.75
VCL-204ENST00000472585 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.39□□□□□ -0.75
VCL-204ENST00000472585 FAM205CA6NFA0 338 aa10.38□□□□□ -0.75
VCL-204ENST00000472585 NRG2O14511 850 aaPredicted RBP10.38□□□□□ -0.75
VCL-204ENST00000472585 CDC45O75419 566 aa10.38□□□□□ -0.75
VCL-204ENST00000472585 ZMYND10O75800 440 aa10.38□□□□□ -0.75
VCL-204ENST00000472585 ARF4P18085 180 aaPredicted RBP10.38□□□□□ -0.75
VCL-204ENST00000472585 CD72P21854 359 aa10.38□□□□□ -0.75
VCL-204ENST00000472585 TGM1P22735 817 aa10.38□□□□□ -0.75
VCL-204ENST00000472585 FSHRP23945 695 aa10.38□□□□□ -0.75
VCL-204ENST00000472585 NRLP54845 237 aa10.38□□□□□ -0.75
VCL-204ENST00000472585 MBTD1Q05BQ5 628 aa10.38□□□□□ -0.75
VCL-204ENST00000472585 FZD5Q13467 585 aa10.38□□□□□ -0.75
VCL-204ENST00000472585 PPP2R5DQ14738 602 aa10.38□□□□□ -0.75
VCL-204ENST00000472585 EPHA7Q15375 998 aa10.38□□□□□ -0.75
VCL-204ENST00000472585 LPAL2Q16609 132 aa10.38□□□□□ -0.75
VCL-204ENST00000472585 LAIR1Q6GTX8 287 aa10.38□□□□□ -0.75
VCL-204ENST00000472585 TSSK4Q6SA08 328 aa10.38□□□□□ -0.75
VCL-204ENST00000472585 GRASPQ7Z6J2 395 aaPredicted RBP10.38□□□□□ -0.75
VCL-204ENST00000472585 SLC7A3Q8WY07 619 aa10.38□□□□□ -0.75
VCL-204ENST00000472585 JPH2Q9BR39 696 aaPredicted RBP10.38□□□□□ -0.75
VCL-204ENST00000472585 LXNQ9BS40 222 aa10.38□□□□□ -0.75
VCL-204ENST00000472585 APOL6Q9BWW8 343 aa10.38□□□□□ -0.75
VCL-204ENST00000472585 LTB4R2Q9NPC1 389 aa10.38□□□□□ -0.75
VCL-204ENST00000472585 FNIP2Q9P278 1114 aa10.38□□□□□ -0.75
VCL-204ENST00000472585 TDRD15B5MCY1 1934 aaKnown RBP10.37□□□□□ -0.75
VCL-204ENST00000472585 ASAP2O43150 1006 aa10.37□□□□□ -0.75
VCL-204ENST00000472585 LRP3O75074 770 aa10.37□□□□□ -0.75
VCL-204ENST00000472585 C1RP00736 705 aa10.37□□□□□ -0.75
VCL-204ENST00000472585 GLRA2P23416 452 aa10.37□□□□□ -0.75
VCL-204ENST00000472585 ARL2P36404 184 aa10.37□□□□□ -0.75
VCL-204ENST00000472585 RFC5P40937 340 aa10.37□□□□□ -0.75
VCL-204ENST00000472585 CYP4A11Q02928 519 aa10.37□□□□□ -0.75
VCL-204ENST00000472585 SSRP1Q08945 709 aaKnown RBP10.37□□□□□ -0.75
VCL-204ENST00000472585 CAPSQ13938 189 aa10.37□□□□□ -0.75
VCL-204ENST00000472585 ACAP1Q15027 740 aa10.37□□□□□ -0.75
VCL-204ENST00000472585 NAB2Q15742 525 aa10.37□□□□□ -0.75
VCL-204ENST00000472585 USP41Q3LFD5 358 aa10.37□□□□□ -0.75
VCL-204ENST00000472585 XKR9Q5GH70 373 aa10.37□□□□□ -0.75
VCL-204ENST00000472585 IL31Q6EBC2 164 aa10.37□□□□□ -0.75
VCL-204ENST00000472585 PPP4R3AQ6IN85 833 aa10.37□□□□□ -0.75
VCL-204ENST00000472585 PRR23BQ6ZRT6 265 aa10.37□□□□□ -0.75
VCL-204ENST00000472585 CELF5Q8N6W0 485 aaKnown RBP10.37□□□□□ -0.75
VCL-204ENST00000472585 CNNM3Q8NE01 707 aa10.37□□□□□ -0.75
VCL-204ENST00000472585 ITFG1Q8TB96 612 aa10.37□□□□□ -0.75
VCL-204ENST00000472585 LNX1Q8TBB1 728 aaPredicted RBP10.37□□□□□ -0.75
VCL-204ENST00000472585 FAM20AQ96MK3 541 aa10.37□□□□□ -0.75
VCL-204ENST00000472585 HSD17B14Q9BPX1 270 aa10.37□□□□□ -0.75
VCL-204ENST00000472585 PHF20Q9BVI0 1012 aa10.37□□□□□ -0.75
VCL-204ENST00000472585 COLEC11Q9BWP8 271 aa10.37□□□□□ -0.75
VCL-204ENST00000472585 C22orf23Q9BZE7 217 aa10.37□□□□□ -0.75
VCL-204ENST00000472585 PLA2G2FQ9BZM2 168 aa10.37□□□□□ -0.75
VCL-204ENST00000472585 SLKQ9H2G2 1235 aaPredicted RBP10.37□□□□□ -0.75
VCL-204ENST00000472585 ZSWIM6Q9HCJ5 1215 aa10.37□□□□□ -0.75
VCL-204ENST00000472585 UBN1Q9NPG3 1134 aa10.37□□□□□ -0.75
VCL-204ENST00000472585 HCFC1R1Q9NWW0 138 aa10.37□□□□□ -0.75
VCL-204ENST00000472585 ADAM28Q9UKQ2 775 aa10.37□□□□□ -0.75
VCL-204ENST00000472585 USP20Q9Y2K6 914 aa10.37□□□□□ -0.75
VCL-204ENST00000472585 MRPS17Q9Y2R5 130 aaKnown RBP10.37□□□□□ -0.75
VCL-204ENST00000472585 GIT1Q9Y2X7 761 aa10.37□□□□□ -0.75
VCL-204ENST00000472585 A0A1B0GUA9 196 aa10.36□□□□□ -0.75
VCL-204ENST00000472585 INO80B-WBP1J3KQ70 363 aa10.36□□□□□ -0.75
VCL-204ENST00000472585 WNT7AO00755 349 aa10.36□□□□□ -0.75
VCL-204ENST00000472585 PTGESO14684 152 aa10.36□□□□□ -0.75
VCL-204ENST00000472585 NR1I2O75469 434 aa10.36□□□□□ -0.75
VCL-204ENST00000472585 DEXIO95424 95 aa10.36□□□□□ -0.75
VCL-204ENST00000472585 NPTXRO95502 500 aa10.36□□□□□ -0.75
VCL-204ENST00000472585 EDN1P05305 212 aa10.36□□□□□ -0.75
VCL-204ENST00000472585 RETP07949 1114 aa10.36□□□□□ -0.75
VCL-204ENST00000472585 RPS9P46781 194 aaKnown RBP10.36□□□□□ -0.75
VCL-204ENST00000472585 STK3Q13188 491 aa10.36□□□□□ -0.75
VCL-204ENST00000472585 NOTUMQ6P988 496 aa10.36□□□□□ -0.75
VCL-204ENST00000472585 CD300LGQ6UXG3 332 aa10.36□□□□□ -0.75
VCL-204ENST00000472585 ZNF852Q6ZMS4 543 aa10.36□□□□□ -0.75
VCL-204ENST00000472585 TPRG1Q6ZUI0 275 aa10.36□□□□□ -0.75
VCL-204ENST00000472585 RUFY3Q7L099 469 aa10.36□□□□□ -0.75
VCL-204ENST00000472585 KRT25Q7Z3Z0 450 aa10.36□□□□□ -0.75
VCL-204ENST00000472585 TPH2Q8IWU9 490 aa10.36□□□□□ -0.75
VCL-204ENST00000472585 GPR65Q8IYL9 337 aa10.36□□□□□ -0.75
VCL-204ENST00000472585 HASPINQ8TF76 798 aa10.36□□□□□ -0.75
VCL-204ENST00000472585 NELL1Q92832 810 aa10.36□□□□□ -0.75
VCL-204ENST00000472585 FGF13Q92913 245 aa10.36□□□□□ -0.75
VCL-204ENST00000472585 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.36□□□□□ -0.75
VCL-204ENST00000472585 FBXW11Q9UKB1 542 aa10.36□□□□□ -0.75
VCL-204ENST00000472585 CDH7Q9ULB5 785 aa10.36□□□□□ -0.75
VCL-204ENST00000472585 ZFYVE26Q68DK2 2539 aa10.35□□□□□ -0.75
VCL-204ENST00000472585 CASTOR2A6NHX0 329 aa10.35□□□□□ -0.75
VCL-204ENST00000472585 CCL16O15467 120 aa10.35□□□□□ -0.75
VCL-204ENST00000472585 FOXD2O60548 495 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms