RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 ZBTB45Q96K62 511 aaPredicted RBP16.87■□□□□ 0.29
COL1A1-203ENST00000471344 LIMD1Q9UGP4 676 aa16.87■□□□□ 0.29
COL1A1-203ENST00000471344 SF3B1O75533 1304 aaKnown RBP eCLIP16.87■□□□□ 0.29
COL1A1-203ENST00000471344 CCDC195A0A1B0GUA6 201 aa16.86■□□□□ 0.29
COL1A1-203ENST00000471344 VPS37CA5D8V6 355 aaPredicted RBP16.86■□□□□ 0.29
COL1A1-203ENST00000471344 HARSP12081 509 aaKnown RBP16.86■□□□□ 0.29
COL1A1-203ENST00000471344 CLCNKBP51801 687 aa16.86■□□□□ 0.29
COL1A1-203ENST00000471344 SEZ6Q53EL9 994 aa16.86■□□□□ 0.29
COL1A1-203ENST00000471344 FAM171A1Q5VUB5 890 aa16.86■□□□□ 0.29
COL1A1-203ENST00000471344 ARL6IP4Q66PJ3 421 aaKnown RBP16.86■□□□□ 0.29
COL1A1-203ENST00000471344 CD300LGQ6UXG3 332 aa16.86■□□□□ 0.29
COL1A1-203ENST00000471344 CEP57Q86XR8 500 aa16.86■□□□□ 0.29
COL1A1-203ENST00000471344 ZNF707Q96C28 371 aaPredicted RBP16.86■□□□□ 0.29
COL1A1-203ENST00000471344 ZMAT2Q96NC0 199 aaKnown RBP16.86■□□□□ 0.29
COL1A1-203ENST00000471344 MRPL4Q9BYD3 311 aaKnown RBP16.86■□□□□ 0.29
COL1A1-203ENST00000471344 TMEM134Q9H6X4 195 aa16.86■□□□□ 0.29
COL1A1-203ENST00000471344 SSX2IPQ9Y2D8 614 aa16.86■□□□□ 0.29
COL1A1-203ENST00000471344 MTCL1Q9Y4B5 1905 aaKnown RBP16.86■□□□□ 0.29
COL1A1-203ENST00000471344 I3L4J1 428 aa16.85■□□□□ 0.29
COL1A1-203ENST00000471344 PLS3P13797 630 aa16.85■□□□□ 0.29
COL1A1-203ENST00000471344 PROZP22891 400 aa16.85■□□□□ 0.29
COL1A1-203ENST00000471344 GRM5P41594 1212 aa16.85■□□□□ 0.29
COL1A1-203ENST00000471344 VCPP55072 806 aaKnown RBP16.85■□□□□ 0.29
COL1A1-203ENST00000471344 DHX8Q14562 1220 aaKnown RBP16.85■□□□□ 0.29
COL1A1-203ENST00000471344 SF3A1Q15459 793 aaKnown RBP16.85■□□□□ 0.29
COL1A1-203ENST00000471344 IER5LQ5T953 404 aa16.85■□□□□ 0.29
COL1A1-203ENST00000471344 LILRA6Q6PI73 481 aa16.85■□□□□ 0.29
COL1A1-203ENST00000471344 CCDC149Q6ZUS6 474 aa16.85■□□□□ 0.29
COL1A1-203ENST00000471344 TMEM161BQ8NDZ6 487 aa16.85■□□□□ 0.29
COL1A1-203ENST00000471344 CDK5RAP3Q96JB5 506 aa16.85■□□□□ 0.29
COL1A1-203ENST00000471344 CLSTN3Q9BQT9 956 aa16.85■□□□□ 0.29
COL1A1-203ENST00000471344 TTPALQ9BTX7 342 aa16.85■□□□□ 0.29
COL1A1-203ENST00000471344 FNIP2Q9P278 1114 aa16.85■□□□□ 0.29
COL1A1-203ENST00000471344 ANKFY1Q9P2R3 1169 aa16.85■□□□□ 0.29
COL1A1-203ENST00000471344 ARIH1Q9Y4X5 557 aaPredicted RBP16.85■□□□□ 0.29
COL1A1-203ENST00000471344 ZDBF2Q9HCK1 2354 aa16.85■□□□□ 0.29
COL1A1-203ENST00000471344 SMIM28A0A1B0GU29 152 aa16.84■□□□□ 0.29
COL1A1-203ENST00000471344 MAPTP10636 758 aaKnown RBP16.84■□□□□ 0.29
COL1A1-203ENST00000471344 KARSQ15046 597 aaKnown RBP16.84■□□□□ 0.29
COL1A1-203ENST00000471344 PSMD5Q16401 504 aa16.84■□□□□ 0.29
COL1A1-203ENST00000471344 FAM173BQ6P4H8 233 aa16.84■□□□□ 0.29
COL1A1-203ENST00000471344 ALKAL1Q6UXT8 129 aa16.84■□□□□ 0.29
COL1A1-203ENST00000471344 C15orf39Q6ZRI6 1047 aa16.84■□□□□ 0.29
COL1A1-203ENST00000471344 BMP8AQ7Z5Y6 402 aa16.84■□□□□ 0.29
COL1A1-203ENST00000471344 ZDHHC14Q8IZN3 488 aa16.84■□□□□ 0.29
COL1A1-203ENST00000471344 CMASQ8NFW8 434 aaPredicted RBP16.84■□□□□ 0.29
COL1A1-203ENST00000471344 LNX1Q8TBB1 728 aaPredicted RBP16.84■□□□□ 0.29
COL1A1-203ENST00000471344 PIK3R5Q8WYR1 880 aa16.84■□□□□ 0.29
COL1A1-203ENST00000471344 SNX27Q96L92 541 aa16.84■□□□□ 0.29
COL1A1-203ENST00000471344 MFSD14AQ96MC6 490 aa16.84■□□□□ 0.29
COL1A1-203ENST00000471344 REEP2Q9BRK0 252 aa16.84■□□□□ 0.29
COL1A1-203ENST00000471344 HAPLN2Q9GZV7 340 aa16.84■□□□□ 0.29
COL1A1-203ENST00000471344 NT5C3AQ9H0P0 336 aa16.84■□□□□ 0.29
COL1A1-203ENST00000471344 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.84■□□□□ 0.29
COL1A1-203ENST00000471344 FOXD4L1Q9NU39 408 aa16.84■□□□□ 0.29
COL1A1-203ENST00000471344 BLOC1S4Q9NUP1 217 aa16.84■□□□□ 0.29
COL1A1-203ENST00000471344 SORCS3Q9UPU3 1222 aa16.84■□□□□ 0.29
COL1A1-203ENST00000471344 USTQ9Y2C2 406 aa16.84■□□□□ 0.29
COL1A1-203ENST00000471344 CLIC4Q9Y696 253 aa16.84■□□□□ 0.29
COL1A1-203ENST00000471344 PDCD11Q14690 1871 aaKnown RBP16.84■□□□□ 0.29
COL1A1-203ENST00000471344 CITO14578 2027 aa16.84■□□□□ 0.29
COL1A1-203ENST00000471344 CLUHO75153 1309 aa16.83■□□□□ 0.28
COL1A1-203ENST00000471344 PLCG1P19174 1290 aa16.83■□□□□ 0.28
COL1A1-203ENST00000471344 BRCC3P46736 316 aa16.83■□□□□ 0.28
COL1A1-203ENST00000471344 MTMR3Q13615 1198 aa16.83■□□□□ 0.28
COL1A1-203ENST00000471344 MCM6Q14566 821 aa16.83■□□□□ 0.28
COL1A1-203ENST00000471344 UPP1Q16831 310 aa16.83■□□□□ 0.28
COL1A1-203ENST00000471344 XKR4Q5GH76 650 aa16.83■□□□□ 0.28
COL1A1-203ENST00000471344 SPECC1Q5M775 1068 aa16.83■□□□□ 0.28
COL1A1-203ENST00000471344 MPZL3Q6UWV2 235 aa16.83■□□□□ 0.28
COL1A1-203ENST00000471344 RSPO2Q6UXX9 243 aaPredicted RBP16.83■□□□□ 0.28
COL1A1-203ENST00000471344 USP49Q70CQ1 688 aa16.83■□□□□ 0.28
COL1A1-203ENST00000471344 BRAPQ7Z569 592 aa16.83■□□□□ 0.28
COL1A1-203ENST00000471344 GPBP1Q86WP2 473 aa16.83■□□□□ 0.28
COL1A1-203ENST00000471344 PRSS33Q8NF86 280 aa16.83■□□□□ 0.28
COL1A1-203ENST00000471344 SPIRE2Q8WWL2 714 aa16.83■□□□□ 0.28
COL1A1-203ENST00000471344 SMG7Q92540 1137 aaKnown RBP16.83■□□□□ 0.28
COL1A1-203ENST00000471344 C18orf25Q96B23 403 aaPredicted RBP16.83■□□□□ 0.28
COL1A1-203ENST00000471344 DOCK6Q96HP0 2047 aa16.83■□□□□ 0.28
COL1A1-203ENST00000471344 NTPCRQ9BSD7 190 aaKnown RBP16.83■□□□□ 0.28
COL1A1-203ENST00000471344 TIPINQ9BVW5 301 aa16.83■□□□□ 0.28
COL1A1-203ENST00000471344 CCDC94Q9BW85 323 aaPredicted RBP16.83■□□□□ 0.28
COL1A1-203ENST00000471344 C17orf75Q9HAS0 396 aa16.83■□□□□ 0.28
COL1A1-203ENST00000471344 RBM19Q9Y4C8 960 aaKnown RBP16.83■□□□□ 0.28
COL1A1-203ENST00000471344 B3GAT3O94766 335 aa16.82■□□□□ 0.28
COL1A1-203ENST00000471344 MCF2P10911 925 aa16.82■□□□□ 0.28
COL1A1-203ENST00000471344 TKTP29401 623 aaKnown RBP16.82■□□□□ 0.28
COL1A1-203ENST00000471344 RESTQ13127 1097 aa16.82■□□□□ 0.28
COL1A1-203ENST00000471344 FBXL6Q8N531 539 aa16.82■□□□□ 0.28
COL1A1-203ENST00000471344 ST13P5Q8NFI4 369 aaPredicted RBP16.82■□□□□ 0.28
COL1A1-203ENST00000471344 AK8Q96MA6 479 aa16.82■□□□□ 0.28
COL1A1-203ENST00000471344 MYADMQ96S97 322 aa16.82■□□□□ 0.28
COL1A1-203ENST00000471344 TCHPQ9BT92 498 aa16.82■□□□□ 0.28
COL1A1-203ENST00000471344 BACH2Q9BYV9 841 aa16.82■□□□□ 0.28
COL1A1-203ENST00000471344 WDR6Q9NNW5 1121 aaKnown RBP16.82■□□□□ 0.28
COL1A1-203ENST00000471344 FBXW11Q9UKB1 542 aa16.82■□□□□ 0.28
COL1A1-203ENST00000471344 DOCK8Q8NF50 2099 aa16.82■□□□□ 0.28
COL1A1-203ENST00000471344 TMEM189-UBE2V1I3L0A0 370 aa16.81■□□□□ 0.28
COL1A1-203ENST00000471344 FGFR3P22607 806 aa16.81■□□□□ 0.28
COL1A1-203ENST00000471344 UBA7P41226 1012 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms