RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 PRIMPOLQ96LW4 560 aa9.02□□□□□ -0.97
GTF3A-206ENST00000470606 C16orf45Q96MC5 204 aaPredicted RBP9.02□□□□□ -0.97
GTF3A-206ENST00000470606 EIF2AQ9BY44 585 aaKnown RBP9.02□□□□□ -0.97
GTF3A-206ENST00000470606 IRX2Q9BZI1 471 aaPredicted RBP9.02□□□□□ -0.97
GTF3A-206ENST00000470606 SPC25Q9HBM1 224 aa9.02□□□□□ -0.97
GTF3A-206ENST00000470606 TRMT13Q9NUP7 481 aaKnown RBP9.02□□□□□ -0.97
GTF3A-206ENST00000470606 AIPL1Q9NZN9 384 aa9.02□□□□□ -0.97
GTF3A-206ENST00000470606 APEX2Q9UBZ4 518 aa9.02□□□□□ -0.97
GTF3A-206ENST00000470606 DNAJC12Q9UKB3 198 aa9.02□□□□□ -0.97
GTF3A-206ENST00000470606 F8VZ95 297 aa9.01□□□□□ -0.97
GTF3A-206ENST00000470606 FOXN3O00409 490 aaPredicted RBP9.01□□□□□ -0.97
GTF3A-206ENST00000470606 LDHAP00338 332 aaKnown RBP9.01□□□□□ -0.97
GTF3A-206ENST00000470606 CST3P01034 146 aaPredicted RBP9.01□□□□□ -0.97
GTF3A-206ENST00000470606 MYCP01106 439 aaPredicted RBP9.01□□□□□ -0.97
GTF3A-206ENST00000470606 GTF2H1P32780 548 aa9.01□□□□□ -0.97
GTF3A-206ENST00000470606 EIF4A3P38919 411 aaKnown RBP9.01□□□□□ -0.97
GTF3A-206ENST00000470606 ARHGAP25P42331 645 aa9.01□□□□□ -0.97
GTF3A-206ENST00000470606 CYP27A1Q02318 531 aa9.01□□□□□ -0.97
GTF3A-206ENST00000470606 ARID5AQ03989 594 aa9.01□□□□□ -0.97
GTF3A-206ENST00000470606 ENPEPQ07075 957 aa9.01□□□□□ -0.97
GTF3A-206ENST00000470606 RAPGEF1Q13905 1077 aa9.01□□□□□ -0.97
GTF3A-206ENST00000470606 DRAP1Q14919 205 aaPredicted RBP9.01□□□□□ -0.97
GTF3A-206ENST00000470606 SLC10A6Q3KNW5 377 aa9.01□□□□□ -0.97
GTF3A-206ENST00000470606 SPOPLQ6IQ16 392 aa9.01□□□□□ -0.97
GTF3A-206ENST00000470606 SESTD1Q86VW0 696 aa9.01□□□□□ -0.97
GTF3A-206ENST00000470606 CXorf38Q8TB03 319 aa9.01□□□□□ -0.97
GTF3A-206ENST00000470606 SYN2Q92777 582 aaPredicted RBP9.01□□□□□ -0.97
GTF3A-206ENST00000470606 IQCDQ96DY2 449 aa9.01□□□□□ -0.97
GTF3A-206ENST00000470606 SCLT1Q96NL6 688 aa9.01□□□□□ -0.97
GTF3A-206ENST00000470606 ARID3AQ99856 593 aa9.01□□□□□ -0.97
GTF3A-206ENST00000470606 UNC93B1Q9H1C4 597 aa9.01□□□□□ -0.97
GTF3A-206ENST00000470606 APOBEC3GQ9HC16 384 aaKnown RBP9.01□□□□□ -0.97
GTF3A-206ENST00000470606 ACP6Q9NPH0 428 aa9.01□□□□□ -0.97
GTF3A-206ENST00000470606 HES2Q9Y543 173 aa9.01□□□□□ -0.97
GTF3A-206ENST00000470606 EPN1Q9Y6I3 576 aaPredicted RBP9.01□□□□□ -0.97
GTF3A-206ENST00000470606 TET1Q8NFU7 2136 aa9.01□□□□□ -0.97
GTF3A-206ENST00000470606 PDCD11Q14690 1871 aaKnown RBP9.01□□□□□ -0.97
GTF3A-206ENST00000470606 UMODL1Q5DID0 1318 aa9.01□□□□□ -0.97
GTF3A-206ENST00000470606 STAG3L1P0CL83 205 aa9.01□□□□□ -0.97
GTF3A-206ENST00000470606 MCF2P10911 925 aa9.01□□□□□ -0.97
GTF3A-206ENST00000470606 TNNI1P19237 187 aa9.01□□□□□ -0.97
GTF3A-206ENST00000470606 PTK2Q05397 1052 aa9.01□□□□□ -0.97
GTF3A-206ENST00000470606 ITGA7Q13683 1181 aa9.01□□□□□ -0.97
GTF3A-206ENST00000470606 TRIM71Q2Q1W2 868 aaKnown RBP9.01□□□□□ -0.97
GTF3A-206ENST00000470606 FAM47CQ5HY64 1035 aa9.01□□□□□ -0.97
GTF3A-206ENST00000470606 UBXN11Q5T124 520 aa9.01□□□□□ -0.97
GTF3A-206ENST00000470606 SFMBT2Q5VUG0 894 aa9.01□□□□□ -0.97
GTF3A-206ENST00000470606 ZNF571Q7Z3V5 609 aaPredicted RBP9.01□□□□□ -0.97
GTF3A-206ENST00000470606 DNAAF5Q86Y56 855 aa9.01□□□□□ -0.97
GTF3A-206ENST00000470606 FBXL13Q8NEE6 735 aa9.01□□□□□ -0.97
GTF3A-206ENST00000470606 ZNF397Q8NF99 534 aaPredicted RBP9.01□□□□□ -0.97
GTF3A-206ENST00000470606 CGRRF1Q99675 332 aa9.01□□□□□ -0.97
GTF3A-206ENST00000470606 SYT11Q9BT88 431 aa9.01□□□□□ -0.97
GTF3A-206ENST00000470606 STK33Q9BYT3 514 aa9.01□□□□□ -0.97
GTF3A-206ENST00000470606 GCOM2Q9BZD3 368 aaPredicted RBP9.01□□□□□ -0.97
GTF3A-206ENST00000470606 MTMR12Q9C0I1 747 aa9.01□□□□□ -0.97
GTF3A-206ENST00000470606 HMX1Q9NP08 348 aaPredicted RBP9.01□□□□□ -0.97
GTF3A-206ENST00000470606 UBE2TQ9NPD8 197 aaPredicted RBP9.01□□□□□ -0.97
GTF3A-206ENST00000470606 RNF19AQ9NV58 838 aa9.01□□□□□ -0.97
GTF3A-206ENST00000470606 RAB20Q9NX57 234 aa9.01□□□□□ -0.97
GTF3A-206ENST00000470606 TRIM10Q9UDY6 481 aa9.01□□□□□ -0.97
GTF3A-206ENST00000470606 PTPN22Q9Y2R2 807 aa9.01□□□□□ -0.97
GTF3A-206ENST00000470606 NOC2LQ9Y3T9 749 aaKnown RBP9.01□□□□□ -0.97
GTF3A-206ENST00000470606 LACTBL1A8MY62 500 aa9□□□□□ -0.97
GTF3A-206ENST00000470606 N4BP1O75113 896 aaKnown RBP9□□□□□ -0.97
GTF3A-206ENST00000470606 GFPT2O94808 682 aa9□□□□□ -0.97
GTF3A-206ENST00000470606 ERLIN2O94905 339 aa9□□□□□ -0.97
GTF3A-206ENST00000470606 CALCAP01258 141 aa9□□□□□ -0.97
GTF3A-206ENST00000470606 HLA-DRAP01903 254 aa9□□□□□ -0.97
GTF3A-206ENST00000470606 NFICP08651 508 aa9□□□□□ -0.97
GTF3A-206ENST00000470606 CTSHP09668 335 aa9□□□□□ -0.97
GTF3A-206ENST00000470606 GNAT1P11488 350 aa9□□□□□ -0.97
GTF3A-206ENST00000470606 CRYBB1P53674 252 aaPredicted RBP9□□□□□ -0.97
GTF3A-206ENST00000470606 MGAT3Q09327 533 aa9□□□□□ -0.97
GTF3A-206ENST00000470606 MAPK8IP2Q13387 824 aaPredicted RBP9□□□□□ -0.97
GTF3A-206ENST00000470606 ARHGAP44Q17R89 818 aa9□□□□□ -0.97
GTF3A-206ENST00000470606 TAF2Q6P1X5 1199 aa9□□□□□ -0.97
GTF3A-206ENST00000470606 CATSPER4Q7RTX7 472 aa9□□□□□ -0.97
GTF3A-206ENST00000470606 RNF180Q86T96 592 aa9□□□□□ -0.97
GTF3A-206ENST00000470606 FAM228AQ86W67 206 aa9□□□□□ -0.97
GTF3A-206ENST00000470606 FAM212AQ96EL1 285 aa9□□□□□ -0.97
GTF3A-206ENST00000470606 FNBP1Q96RU3 617 aa9□□□□□ -0.97
GTF3A-206ENST00000470606 CELF4Q9BZC1 486 aaKnown RBP9□□□□□ -0.97
GTF3A-206ENST00000470606 SENP6Q9GZR1 1112 aaPredicted RBP9□□□□□ -0.97
GTF3A-206ENST00000470606 LACRTQ9GZZ8 138 aa9□□□□□ -0.97
GTF3A-206ENST00000470606 XRN2Q9H0D6 950 aaKnown RBP eCLIP9□□□□□ -0.97
GTF3A-206ENST00000470606 HAUS4Q9H6D7 363 aa9□□□□□ -0.97
GTF3A-206ENST00000470606 AGO3Q9H9G7 860 aaKnown RBP9□□□□□ -0.97
GTF3A-206ENST00000470606 CDY2AQ9Y6F7 541 aa9□□□□□ -0.97
GTF3A-206ENST00000470606 RALGAPA2Q2PPJ7 1873 aa9□□□□□ -0.97
GTF3A-206ENST00000470606 A0A087X0T9 212 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 A0A1W2PQ45 241 aaPredicted RBP8.99□□□□□ -0.97
GTF3A-206ENST00000470606 A0A1W2PQY0 241 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 EVI5O60447 810 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 B4GALT4O60513 344 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 SLC34A2O95436 690 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 LCA5LO95447 670 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 NPTXRO95502 500 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 FAM228BP0C875 321 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 KIF11P52732 1056 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms