RNA–Protein interactions for RNA: ENST00000469404.1

NCK1-204, Transcript of NCK adaptor protein 1, humanhuman

TSL 2 BASIC

Gene NCK1, Length 2,403 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-204ENST00000469404 PDZD7Q9H5P4 517 aa4.85□□□□□ -1.63
NCK1-204ENST00000469404 TMEM206Q9H813 350 aa4.85□□□□□ -1.63
NCK1-204ENST00000469404 SEL1LQ9UBV2 794 aa4.85□□□□□ -1.63
NCK1-204ENST00000469404 ARMCX3Q9UH62 379 aaPredicted RBP4.85□□□□□ -1.63
NCK1-204ENST00000469404 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.85□□□□□ -1.63
NCK1-204ENST00000469404 PHLPP2Q6ZVD8 1323 aa4.85□□□□□ -1.63
NCK1-204ENST00000469404 SPEGQ15772 3267 aa4.85□□□□□ -1.63
NCK1-204ENST00000469404 COL1A2P08123 1366 aa4.85□□□□□ -1.63
NCK1-204ENST00000469404 TRIP11Q15643 1979 aa4.85□□□□□ -1.63
NCK1-204ENST00000469404 CASTOR2A6NHX0 329 aa4.85□□□□□ -1.63
NCK1-204ENST00000469404 NT5C1B-RDH14C9J2C7 533 aa4.85□□□□□ -1.63
NCK1-204ENST00000469404 F8W810 466 aa4.85□□□□□ -1.63
NCK1-204ENST00000469404 PHACTR2O75167 634 aa4.85□□□□□ -1.63
NCK1-204ENST00000469404 TOM1L1O75674 476 aa4.85□□□□□ -1.63
NCK1-204ENST00000469404 STAG3L1P0CL83 205 aa4.85□□□□□ -1.63
NCK1-204ENST00000469404 KRT13P13646 458 aa4.85□□□□□ -1.63
NCK1-204ENST00000469404 SELPP16109 830 aa4.85□□□□□ -1.63
NCK1-204ENST00000469404 HOXA11P31270 313 aaPredicted RBP4.85□□□□□ -1.63
NCK1-204ENST00000469404 EFNA5P52803 228 aa4.85□□□□□ -1.63
NCK1-204ENST00000469404 CRYBB1P53674 252 aaPredicted RBP4.85□□□□□ -1.63
NCK1-204ENST00000469404 PTK7Q13308 1070 aa4.85□□□□□ -1.63
NCK1-204ENST00000469404 RAPGEF1Q13905 1077 aa4.85□□□□□ -1.63
NCK1-204ENST00000469404 TCTN1Q2MV58 587 aa4.85□□□□□ -1.63
NCK1-204ENST00000469404 FBXO47Q5MNV8 452 aa4.85□□□□□ -1.63
NCK1-204ENST00000469404 SPOUT1Q5T280 376 aaKnown RBP4.85□□□□□ -1.63
NCK1-204ENST00000469404 CENPPQ6IPU0 288 aa4.85□□□□□ -1.63
NCK1-204ENST00000469404 SPOPLQ6IQ16 392 aa4.85□□□□□ -1.63
NCK1-204ENST00000469404 NOTUMQ6P988 496 aa4.85□□□□□ -1.63
NCK1-204ENST00000469404 GJB7Q6PEY0 223 aa4.85□□□□□ -1.63
NCK1-204ENST00000469404 TMC6Q7Z403 805 aa4.85□□□□□ -1.63
NCK1-204ENST00000469404 IRF2BP1Q8IU81 584 aa4.85□□□□□ -1.63
NCK1-204ENST00000469404 EXOC8Q8IYI6 725 aa4.85□□□□□ -1.63
NCK1-204ENST00000469404 ANKRD20A12PQ8NF67 263 aa4.85□□□□□ -1.63
NCK1-204ENST00000469404 ZNF507Q8TCN5 953 aa4.85□□□□□ -1.63
NCK1-204ENST00000469404 SPIRE2Q8WWL2 714 aa4.85□□□□□ -1.63
NCK1-204ENST00000469404 C18orf25Q96B23 403 aaPredicted RBP4.85□□□□□ -1.63
NCK1-204ENST00000469404 GAD1Q99259 594 aa4.85□□□□□ -1.63
NCK1-204ENST00000469404 TSEN34Q9BSV6 310 aaKnown RBP4.85□□□□□ -1.63
NCK1-204ENST00000469404 CRISPLD2Q9H0B8 497 aa4.85□□□□□ -1.63
NCK1-204ENST00000469404 C2orf40Q9H1Z8 148 aa4.85□□□□□ -1.63
NCK1-204ENST00000469404 NLRC4Q9NPP4 1024 aa4.85□□□□□ -1.63
NCK1-204ENST00000469404 PRMT7Q9NVM4 692 aaPredicted RBP4.85□□□□□ -1.63
NCK1-204ENST00000469404 PLAGL2Q9UPG8 496 aa4.85□□□□□ -1.63
NCK1-204ENST00000469404 PTPRJQ12913 1337 aa4.85□□□□□ -1.63
NCK1-204ENST00000469404 I3L4J1 428 aa4.84□□□□□ -1.63
NCK1-204ENST00000469404 PDXKO00764 312 aa4.84□□□□□ -1.63
NCK1-204ENST00000469404 EIF3DO15371 548 aaKnown RBP eCLIP4.84□□□□□ -1.63
NCK1-204ENST00000469404 GAS2O43903 313 aaKnown RBP4.84□□□□□ -1.63
NCK1-204ENST00000469404 RECQL4O94761 1208 aa4.84□□□□□ -1.63
NCK1-204ENST00000469404 CALCAP01258 141 aa4.84□□□□□ -1.63
NCK1-204ENST00000469404 TPM2P07951 284 aa4.84□□□□□ -1.63
NCK1-204ENST00000469404 NFICP08651 508 aa4.84□□□□□ -1.63
NCK1-204ENST00000469404 TRIM21P19474 475 aaKnown RBP4.84□□□□□ -1.63
NCK1-204ENST00000469404 IGFBP6P24592 240 aaPredicted RBP4.84□□□□□ -1.63
NCK1-204ENST00000469404 RPL13P26373 211 aaKnown RBP4.84□□□□□ -1.63
NCK1-204ENST00000469404 ERCC5P28715 1186 aaPredicted RBP4.84□□□□□ -1.63
NCK1-204ENST00000469404 PSMC2P35998 433 aaKnown RBP4.84□□□□□ -1.63
NCK1-204ENST00000469404 SCNN1GP51170 649 aa4.84□□□□□ -1.63
NCK1-204ENST00000469404 RNASELQ05823 741 aaKnown RBP4.84□□□□□ -1.63
NCK1-204ENST00000469404 LRRC63Q05C16 580 aa4.84□□□□□ -1.63
NCK1-204ENST00000469404 BFSP2Q13515 415 aa4.84□□□□□ -1.63
NCK1-204ENST00000469404 ARID5BQ14865 1188 aa4.84□□□□□ -1.63
NCK1-204ENST00000469404 CBWD6Q4V339 395 aa4.84□□□□□ -1.63
NCK1-204ENST00000469404 ZNF394Q53GI3 561 aa4.84□□□□□ -1.63
NCK1-204ENST00000469404 CBWD3Q5JTY5 395 aa4.84□□□□□ -1.63
NCK1-204ENST00000469404 CBWD5Q5RIA9 395 aa4.84□□□□□ -1.63
NCK1-204ENST00000469404 CDCA2Q69YH5 1023 aaPredicted RBP4.84□□□□□ -1.63
NCK1-204ENST00000469404 MPZL3Q6UWV2 235 aa4.84□□□□□ -1.63
NCK1-204ENST00000469404 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.84□□□□□ -1.63
NCK1-204ENST00000469404 LRRC55Q6ZSA7 311 aa4.84□□□□□ -1.63
NCK1-204ENST00000469404 RRAGAQ7L523 313 aa4.84□□□□□ -1.63
NCK1-204ENST00000469404 GPD1LQ8N335 351 aa4.84□□□□□ -1.63
NCK1-204ENST00000469404 LINC01465Q8N7H1 131 aa4.84□□□□□ -1.63
NCK1-204ENST00000469404 OR5B17Q8NGF7 314 aa4.84□□□□□ -1.63
NCK1-204ENST00000469404 PLEKHO2Q8TD55 490 aa4.84□□□□□ -1.63
NCK1-204ENST00000469404 HELQQ8TDG4 1101 aa4.84□□□□□ -1.63
NCK1-204ENST00000469404 TIPINQ9BVW5 301 aa4.84□□□□□ -1.63
NCK1-204ENST00000469404 CCDC113Q9H0I3 377 aa4.84□□□□□ -1.63
NCK1-204ENST00000469404 RPF1Q9H9Y2 349 aaKnown RBP4.84□□□□□ -1.63
NCK1-204ENST00000469404 CERS4Q9HA82 394 aa4.84□□□□□ -1.63
NCK1-204ENST00000469404 C17orf75Q9HAS0 396 aa4.84□□□□□ -1.63
NCK1-204ENST00000469404 GCNT4Q9P109 453 aa4.84□□□□□ -1.63
NCK1-204ENST00000469404 NXF1Q9UBU9 619 aaKnown RBP4.84□□□□□ -1.63
NCK1-204ENST00000469404 R3HCC1Q9Y3T6 440 aaKnown RBP4.84□□□□□ -1.63
NCK1-204ENST00000469404 IPPQ9Y573 584 aa4.84□□□□□ -1.63
NCK1-204ENST00000469404 PCDHB2Q9Y5E7 798 aa4.84□□□□□ -1.63
NCK1-204ENST00000469404 C2orf72A6NCS6 295 aa4.84□□□□□ -1.64
NCK1-204ENST00000469404 ZNF233A6NK53 670 aa4.84□□□□□ -1.64
NCK1-204ENST00000469404 GPR182O15218 404 aa4.84□□□□□ -1.64
NCK1-204ENST00000469404 ASAP2O43150 1006 aa4.84□□□□□ -1.64
NCK1-204ENST00000469404 ZC3H11AO75152 810 aaKnown RBP eCLIP4.84□□□□□ -1.64
NCK1-204ENST00000469404 TMEM191BP0C7N4 346 aa4.84□□□□□ -1.64
NCK1-204ENST00000469404 CD58P19256 250 aa4.84□□□□□ -1.64
NCK1-204ENST00000469404 CDK7P50613 346 aa4.84□□□□□ -1.64
NCK1-204ENST00000469404 VAMP7P51809 220 aa4.84□□□□□ -1.64
NCK1-204ENST00000469404 YARSP54577 528 aaKnown RBP4.84□□□□□ -1.64
NCK1-204ENST00000469404 ADKP55263 362 aaKnown RBP4.84□□□□□ -1.64
NCK1-204ENST00000469404 KCNH2Q12809 1159 aa4.84□□□□□ -1.64
NCK1-204ENST00000469404 ARHGAP44Q17R89 818 aa4.84□□□□□ -1.64
NCK1-204ENST00000469404 ZCWPW2Q504Y3 356 aa4.84□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms