RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 LCA5LO95447 670 aa20.5■□□□□ 0.87
SMC4-209ENST00000468653 C4BPAP04003 597 aaKnown RBP20.5■□□□□ 0.87
SMC4-209ENST00000468653 CCDC172P0C7W6 258 aa20.5■□□□□ 0.87
SMC4-209ENST00000468653 PNMA6AP0CW24 399 aaPredicted RBP20.5■□□□□ 0.87
SMC4-209ENST00000468653 MCF2P10911 925 aa20.5■□□□□ 0.87
SMC4-209ENST00000468653 ARF4P18085 180 aaPredicted RBP20.5■□□□□ 0.87
SMC4-209ENST00000468653 PRKCIP41743 596 aa20.5■□□□□ 0.87
SMC4-209ENST00000468653 OSTNP61366 133 aa20.5■□□□□ 0.87
SMC4-209ENST00000468653 ARHGEF6Q15052 776 aa20.5■□□□□ 0.87
SMC4-209ENST00000468653 PPM1KQ8N3J5 372 aa20.5■□□□□ 0.87
SMC4-209ENST00000468653 FAM84AQ96KN4 292 aa20.5■□□□□ 0.87
SMC4-209ENST00000468653 PDZD7Q9H5P4 517 aa20.5■□□□□ 0.87
SMC4-209ENST00000468653 DNAI1Q9UI46 699 aa20.5■□□□□ 0.87
SMC4-209ENST00000468653 PAXBP1Q9Y5B6 917 aa20.5■□□□□ 0.87
SMC4-209ENST00000468653 PTPRJQ12913 1337 aa20.49■□□□□ 0.87
SMC4-209ENST00000468653 ZNF263O14978 683 aa20.49■□□□□ 0.87
SMC4-209ENST00000468653 KIF5CO60282 957 aa20.49■□□□□ 0.87
SMC4-209ENST00000468653 TSPAN1O60635 241 aa20.49■□□□□ 0.87
SMC4-209ENST00000468653 FKTNO75072 461 aa20.49■□□□□ 0.87
SMC4-209ENST00000468653 ARHGAP25P42331 645 aa20.49■□□□□ 0.87
SMC4-209ENST00000468653 PIK3CAP42336 1068 aa20.49■□□□□ 0.87
SMC4-209ENST00000468653 MFAP3P55082 362 aa20.49■□□□□ 0.87
SMC4-209ENST00000468653 PTK2Q05397 1052 aa20.49■□□□□ 0.87
SMC4-209ENST00000468653 GFPT1Q06210 699 aaPredicted RBP20.49■□□□□ 0.87
SMC4-209ENST00000468653 NCBP1Q09161 790 aaKnown RBP20.49■□□□□ 0.87
SMC4-209ENST00000468653 TDRD10Q5VZ19 366 aaKnown RBP20.49■□□□□ 0.87
SMC4-209ENST00000468653 JAKMIP2Q96AA8 810 aa20.49■□□□□ 0.87
SMC4-209ENST00000468653 IFIH1Q9BYX4 1025 aaKnown RBP20.49■□□□□ 0.87
SMC4-209ENST00000468653 GPR88Q9GZN0 384 aa20.49■□□□□ 0.87
SMC4-209ENST00000468653 PCDHA13Q9Y5I0 950 aa20.49■□□□□ 0.87
SMC4-209ENST00000468653 EVI5O60447 810 aa20.49■□□□□ 0.87
SMC4-209ENST00000468653 PHACTR2O75167 634 aa20.49■□□□□ 0.87
SMC4-209ENST00000468653 ADAMTS4O75173 837 aa20.49■□□□□ 0.87
SMC4-209ENST00000468653 HLA-DRAP01903 254 aa20.49■□□□□ 0.87
SMC4-209ENST00000468653 VAV2P52735 878 aa20.49■□□□□ 0.87
SMC4-209ENST00000468653 AP3M2P53677 418 aa20.49■□□□□ 0.87
SMC4-209ENST00000468653 NBPF20Q3BBV1 942 aa20.49■□□□□ 0.87
SMC4-209ENST00000468653 WDR44Q5JSH3 913 aa20.49■□□□□ 0.87
SMC4-209ENST00000468653 WDR49Q8IV35 697 aa20.49■□□□□ 0.87
SMC4-209ENST00000468653 OSMRQ99650 979 aa20.49■□□□□ 0.87
SMC4-209ENST00000468653 RPF1Q9H9Y2 349 aaKnown RBP20.49■□□□□ 0.87
SMC4-209ENST00000468653 CDHR5Q9HBB8 845 aa20.49■□□□□ 0.87
SMC4-209ENST00000468653 FOXN3O00409 490 aaPredicted RBP20.48■□□□□ 0.87
SMC4-209ENST00000468653 ZC3H11AO75152 810 aaKnown RBP eCLIP20.48■□□□□ 0.874e-12■■■■■ 110
SMC4-209ENST00000468653 FGFR4P22455 802 aa20.48■□□□□ 0.87
SMC4-209ENST00000468653 HOXC8P31273 242 aa20.48■□□□□ 0.87
SMC4-209ENST00000468653 CCDC122Q5T0U0 273 aa20.48■□□□□ 0.87
SMC4-209ENST00000468653 CATSPER4Q7RTX7 472 aa20.48■□□□□ 0.87
SMC4-209ENST00000468653 ZNF571Q7Z3V5 609 aaPredicted RBP20.48■□□□□ 0.87
SMC4-209ENST00000468653 VPS36Q86VN1 386 aa20.48■□□□□ 0.87
SMC4-209ENST00000468653 NME8Q8N427 588 aa20.48■□□□□ 0.87
SMC4-209ENST00000468653 CEP120Q8N960 986 aa20.48■□□□□ 0.87
SMC4-209ENST00000468653 OR5B17Q8NGF7 314 aa20.48■□□□□ 0.87
SMC4-209ENST00000468653 PXYLP1Q8TE99 480 aa20.48■□□□□ 0.87
SMC4-209ENST00000468653 ADPGKQ9BRR6 497 aa20.48■□□□□ 0.87
SMC4-209ENST00000468653 PI4K2AQ9BTU6 479 aa20.48■□□□□ 0.87
SMC4-209ENST00000468653 LUC7LQ9NQ29 371 aaKnown RBP20.48■□□□□ 0.87
SMC4-209ENST00000468653 C1orf112Q9NSG2 853 aa20.48■□□□□ 0.87
SMC4-209ENST00000468653 KRT86O43790 486 aa20.47■□□□□ 0.87
SMC4-209ENST00000468653 CLTAP09496 248 aa20.47■□□□□ 0.87
SMC4-209ENST00000468653 DARSP14868 501 aaKnown RBP20.47■□□□□ 0.87
SMC4-209ENST00000468653 ANXA13P27216 316 aa20.47■□□□□ 0.87
SMC4-209ENST00000468653 MAGEA1P43355 309 aa20.47■□□□□ 0.87
SMC4-209ENST00000468653 KIF5AQ12840 1032 aa20.47■□□□□ 0.87
SMC4-209ENST00000468653 KCNA10Q16322 511 aa20.47■□□□□ 0.87
SMC4-209ENST00000468653 SLC18A3Q16572 532 aa20.47■□□□□ 0.87
SMC4-209ENST00000468653 KYAT1Q16773 422 aa20.47■□□□□ 0.87
SMC4-209ENST00000468653 MAP3K21Q5TCX8 1036 aa20.47■□□□□ 0.87
SMC4-209ENST00000468653 ZNF662Q6ZS27 426 aa20.47■□□□□ 0.87
SMC4-209ENST00000468653 TXLNBQ8N3L3 684 aa20.47■□□□□ 0.87
SMC4-209ENST00000468653 KAT5Q92993 513 aa20.47■□□□□ 0.87
SMC4-209ENST00000468653 ADAMTS1Q9UHI8 967 aa20.47■□□□□ 0.87
SMC4-209ENST00000468653 GUCA1BQ9UMX6 200 aa20.47■□□□□ 0.87
SMC4-209ENST00000468653 A0A1B0GUA9 196 aa20.46■□□□□ 0.87
SMC4-209ENST00000468653 RBAK-RBAKDNI3L0D1 243 aa20.46■□□□□ 0.87
SMC4-209ENST00000468653 IL18RAPO95256 599 aa20.46■□□□□ 0.87
SMC4-209ENST00000468653 ABL1P00519 1130 aa20.46■□□□□ 0.87
SMC4-209ENST00000468653 ASGR1P07306 291 aa20.46■□□□□ 0.87
SMC4-209ENST00000468653 STAG3L1P0CL83 205 aa20.46■□□□□ 0.87
SMC4-209ENST00000468653 DUOXA2Q1HG44 320 aa20.46■□□□□ 0.87
SMC4-209ENST00000468653 FAM47CQ5HY64 1035 aa20.46■□□□□ 0.87
SMC4-209ENST00000468653 TAF2Q6P1X5 1199 aa20.46■□□□□ 0.87
SMC4-209ENST00000468653 ZNF710Q8N1W2 664 aa20.46■□□□□ 0.87
SMC4-209ENST00000468653 KLHDC9Q8NEP7 349 aa20.46■□□□□ 0.87
SMC4-209ENST00000468653 HELQQ8TDG4 1101 aa20.46■□□□□ 0.87
SMC4-209ENST00000468653 ZNF296Q8WUU4 475 aaPredicted RBP20.46■□□□□ 0.87
SMC4-209ENST00000468653 IRX2Q9BZI1 471 aaPredicted RBP20.46■□□□□ 0.87
SMC4-209ENST00000468653 TSGA10Q9BZW7 698 aa20.46■□□□□ 0.87
SMC4-209ENST00000468653 TRIM10Q9UDY6 481 aa20.46■□□□□ 0.87
SMC4-209ENST00000468653 DDX20Q9UHI6 824 aaKnown RBP20.46■□□□□ 0.87
SMC4-209ENST00000468653 GTF2IRD1Q9UHL9 959 aa20.46■□□□□ 0.87
SMC4-209ENST00000468653 TFR2Q9UP52 801 aa20.46■□□□□ 0.87
SMC4-209ENST00000468653 A0A087X0T9 212 aa20.46■□□□□ 0.87
SMC4-209ENST00000468653 VNN1O95497 513 aa20.46■□□□□ 0.87
SMC4-209ENST00000468653 FAM228BP0C875 321 aa20.46■□□□□ 0.87
SMC4-209ENST00000468653 CASQ1P31415 396 aa20.46■□□□□ 0.87
SMC4-209ENST00000468653 USP8P40818 1118 aa20.46■□□□□ 0.87
SMC4-209ENST00000468653 PCBP1Q15365 356 aaKnown RBP eCLIP20.46■□□□□ 0.873e-12■■■■□ 20.8
SMC4-209ENST00000468653 ZNF569Q5MCW4 686 aa20.46■□□□□ 0.87
SMC4-209ENST00000468653 APBB1IPQ7Z5R6 666 aaPredicted RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms