RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 C12orf76Q8N812 135 aaPredicted RBP18.74■□□□□ 0.59
SSBP1-207ENST00000468267 CEP120Q8N960 986 aa18.74■□□□□ 0.59
SSBP1-207ENST00000468267 LARP4BQ92615 738 aaKnown RBP18.74■□□□□ 0.59
SSBP1-207ENST00000468267 KCNN1Q92952 543 aa18.74■□□□□ 0.59
SSBP1-207ENST00000468267 ZBTB45Q96K62 511 aaPredicted RBP18.74■□□□□ 0.59
SSBP1-207ENST00000468267 PPP1R10Q96QC0 940 aaKnown RBP18.74■□□□□ 0.59
SSBP1-207ENST00000468267 PLXNA3P51805 1871 aa18.73■□□□□ 0.59
SSBP1-207ENST00000468267 TEX28O15482 410 aa18.73■□□□□ 0.59
SSBP1-207ENST00000468267 DCXO43602 365 aa18.73■□□□□ 0.59
SSBP1-207ENST00000468267 TOM1L1O75674 476 aa18.73■□□□□ 0.59
SSBP1-207ENST00000468267 FAM13AO94988 1023 aa18.73■□□□□ 0.59
SSBP1-207ENST00000468267 SCP2P22307 547 aa18.73■□□□□ 0.59
SSBP1-207ENST00000468267 YARSP54577 528 aaKnown RBP18.73■□□□□ 0.59
SSBP1-207ENST00000468267 OSTNP61366 133 aa18.73■□□□□ 0.59
SSBP1-207ENST00000468267 XKR4Q5GH76 650 aa18.73■□□□□ 0.59
SSBP1-207ENST00000468267 RARS2Q5T160 578 aaKnown RBP18.73■□□□□ 0.59
SSBP1-207ENST00000468267 ZPBP2Q6X784 338 aa18.73■□□□□ 0.59
SSBP1-207ENST00000468267 HAUS6Q7Z4H7 955 aa18.73■□□□□ 0.59
SSBP1-207ENST00000468267 RNF135Q8IUD6 432 aa18.73■□□□□ 0.59
SSBP1-207ENST00000468267 MYCT1Q8N699 235 aa18.73■□□□□ 0.59
SSBP1-207ENST00000468267 B3GALT6Q96L58 329 aa18.73■□□□□ 0.59
SSBP1-207ENST00000468267 FBXL18Q96ME1 805 aa18.73■□□□□ 0.59
SSBP1-207ENST00000468267 ACAP3Q96P50 834 aa18.73■□□□□ 0.59
SSBP1-207ENST00000468267 PARVGQ9HBI0 331 aa18.73■□□□□ 0.59
SSBP1-207ENST00000468267 TOPORSQ9NS56 1045 aaPredicted RBP18.73■□□□□ 0.59
SSBP1-207ENST00000468267 CCDC39Q9UFE4 941 aa18.73■□□□□ 0.59
SSBP1-207ENST00000468267 SMIM28A0A1B0GU29 152 aa18.72■□□□□ 0.59
SSBP1-207ENST00000468267 GPR37L1O60883 481 aa18.72■□□□□ 0.59
SSBP1-207ENST00000468267 KIF4AO95239 1232 aa18.72■□□□□ 0.59
SSBP1-207ENST00000468267 KRT18P05783 430 aaKnown RBP18.72■□□□□ 0.59
SSBP1-207ENST00000468267 ADH1AP07327 375 aa18.72■□□□□ 0.59
SSBP1-207ENST00000468267 MTHFRP42898 656 aa18.72■□□□□ 0.59
SSBP1-207ENST00000468267 NASPP49321 788 aaPredicted RBP18.72■□□□□ 0.59
SSBP1-207ENST00000468267 GLRA4Q5JXX5 417 aa18.72■□□□□ 0.59
SSBP1-207ENST00000468267 KANK3Q6NY19 840 aa18.72■□□□□ 0.59
SSBP1-207ENST00000468267 KRI1Q8N9T8 703 aaKnown RBP18.72■□□□□ 0.59
SSBP1-207ENST00000468267 RPGRIP1Q96KN7 1286 aa18.72■□□□□ 0.59
SSBP1-207ENST00000468267 NECTIN4Q96NY8 510 aa18.72■□□□□ 0.59
SSBP1-207ENST00000468267 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.72■□□□□ 0.59
SSBP1-207ENST00000468267 STK17AQ9UEE5 414 aa18.72■□□□□ 0.59
SSBP1-207ENST00000468267 CDH22Q9UJ99 828 aa18.72■□□□□ 0.59
SSBP1-207ENST00000468267 SF3B1O75533 1304 aaKnown RBP eCLIP18.72■□□□□ 0.59
SSBP1-207ENST00000468267 VWA8A3KMH1 1905 aa18.71■□□□□ 0.59
SSBP1-207ENST00000468267 PDIA4P13667 645 aaKnown RBP18.71■□□□□ 0.59
SSBP1-207ENST00000468267 TXLNAP40222 546 aa18.71■□□□□ 0.59
SSBP1-207ENST00000468267 NOLC1Q14978 699 aaKnown RBP eCLIP18.71■□□□□ 0.59
SSBP1-207ENST00000468267 HERC4Q5GLZ8 1057 aaPredicted RBP18.71■□□□□ 0.59
SSBP1-207ENST00000468267 TMEM31Q5JXX7 168 aa18.71■□□□□ 0.59
SSBP1-207ENST00000468267 RRAGBQ5VZM2 374 aa18.71■□□□□ 0.59
SSBP1-207ENST00000468267 DCLRE1AQ6PJP8 1040 aa18.71■□□□□ 0.59
SSBP1-207ENST00000468267 HASPINQ8TF76 798 aa18.71■□□□□ 0.59
SSBP1-207ENST00000468267 RIN2Q8WYP3 895 aaPredicted RBP18.71■□□□□ 0.59
SSBP1-207ENST00000468267 RIPOR3Q96MK2 946 aa18.71■□□□□ 0.59
SSBP1-207ENST00000468267 UROC1Q96N76 676 aa18.71■□□□□ 0.59
SSBP1-207ENST00000468267 SFXN1Q9H9B4 322 aa18.71■□□□□ 0.59
SSBP1-207ENST00000468267 C11orf16Q9NQ32 467 aa18.71■□□□□ 0.59
SSBP1-207ENST00000468267 FNIP2Q9P278 1114 aa18.71■□□□□ 0.59
SSBP1-207ENST00000468267 ANKFY1Q9P2R3 1169 aa18.71■□□□□ 0.59
SSBP1-207ENST00000468267 PDCD11Q14690 1871 aaKnown RBP18.71■□□□□ 0.59
SSBP1-207ENST00000468267 CLDN3O15551 220 aa18.7■□□□□ 0.58
SSBP1-207ENST00000468267 TRAK2O60296 914 aa18.7■□□□□ 0.58
SSBP1-207ENST00000468267 TBCAO75347 108 aaKnown RBP18.7■□□□□ 0.58
SSBP1-207ENST00000468267 C1RP00736 705 aa18.7■□□□□ 0.58
SSBP1-207ENST00000468267 HSP90AA1P07900 732 aaKnown RBP18.7■□□□□ 0.58
SSBP1-207ENST00000468267 WEE2P0C1S8 567 aa18.7■□□□□ 0.58
SSBP1-207ENST00000468267 HARSP12081 509 aaKnown RBP18.7■□□□□ 0.58
SSBP1-207ENST00000468267 KCNE1P15382 129 aa18.7■□□□□ 0.58
SSBP1-207ENST00000468267 CREMQ03060 361 aa18.7■□□□□ 0.58
SSBP1-207ENST00000468267 MCL1Q07820 350 aa18.7■□□□□ 0.58
SSBP1-207ENST00000468267 ELAVL2Q12926 359 aaKnown RBP18.7■□□□□ 0.58
SSBP1-207ENST00000468267 UPP1Q16831 310 aa18.7■□□□□ 0.58
SSBP1-207ENST00000468267 RTP2Q5QGT7 225 aa18.7■□□□□ 0.58
SSBP1-207ENST00000468267 ATAT1Q5SQI0 421 aa18.7■□□□□ 0.58
SSBP1-207ENST00000468267 FAM171A1Q5VUB5 890 aa18.7■□□□□ 0.58
SSBP1-207ENST00000468267 TMC5Q6UXY8 1006 aa18.7■□□□□ 0.58
SSBP1-207ENST00000468267 SNX27Q96L92 541 aa18.7■□□□□ 0.58
SSBP1-207ENST00000468267 FIZ1Q96SL8 496 aa18.7■□□□□ 0.58
SSBP1-207ENST00000468267 LRFN3Q9BTN0 628 aa18.7■□□□□ 0.58
SSBP1-207ENST00000468267 TTPALQ9BTX7 342 aa18.7■□□□□ 0.58
SSBP1-207ENST00000468267 HAPLN2Q9GZV7 340 aa18.7■□□□□ 0.58
SSBP1-207ENST00000468267 POMKQ9H5K3 350 aa18.7■□□□□ 0.58
SSBP1-207ENST00000468267 MUTYHQ9UIF7 546 aa18.7■□□□□ 0.58
SSBP1-207ENST00000468267 TBX20Q9UMR3 447 aa18.7■□□□□ 0.58
SSBP1-207ENST00000468267 C2orf16Q68DN1 1984 aa18.7■□□□□ 0.58
SSBP1-207ENST00000468267 FAM86C2PA6NEL3 165 aa18.69■□□□□ 0.58
SSBP1-207ENST00000468267 TMEM189-UBE2V1I3L0A0 370 aa18.69■□□□□ 0.58
SSBP1-207ENST00000468267 K7ENM7 598 aa18.69■□□□□ 0.58
SSBP1-207ENST00000468267 MEFVO15553 781 aaPredicted RBP18.69■□□□□ 0.58
SSBP1-207ENST00000468267 GLUD1P00367 558 aa18.69■□□□□ 0.58
SSBP1-207ENST00000468267 IGFBP6P24592 240 aaPredicted RBP18.69■□□□□ 0.58
SSBP1-207ENST00000468267 CLCNKBP51801 687 aa18.69■□□□□ 0.58
SSBP1-207ENST00000468267 STK38Q15208 465 aa18.69■□□□□ 0.58
SSBP1-207ENST00000468267 CD300LGQ6UXG3 332 aa18.69■□□□□ 0.58
SSBP1-207ENST00000468267 GPR149Q86SP6 731 aa18.69■□□□□ 0.58
SSBP1-207ENST00000468267 LINC00301Q8NCQ3 95 aa18.69■□□□□ 0.58
SSBP1-207ENST00000468267 BICD1Q96G01 975 aa18.69■□□□□ 0.58
SSBP1-207ENST00000468267 ZNF396Q96N95 335 aaPredicted RBP18.69■□□□□ 0.58
SSBP1-207ENST00000468267 ZMAT2Q96NC0 199 aaKnown RBP18.69■□□□□ 0.58
SSBP1-207ENST00000468267 ZHX3Q9H4I2 956 aa18.69■□□□□ 0.58
SSBP1-207ENST00000468267 MAN1C1Q9NR34 630 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms