RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 DRC7Q8IY82 874 aa5□□□□□ -1.61
VPS50-209ENST00000467326 SYNE4Q8N205 404 aa5□□□□□ -1.61
VPS50-209ENST00000467326 PPM1NQ8N819 430 aa5□□□□□ -1.61
VPS50-209ENST00000467326 OR2I1PQ8NGU4 316 aa5□□□□□ -1.61
VPS50-209ENST00000467326 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5□□□□□ -1.61
VPS50-209ENST00000467326 CASKIN2Q8WXE0 1202 aa5□□□□□ -1.61
VPS50-209ENST00000467326 JADE3Q92613 823 aa5□□□□□ -1.61
VPS50-209ENST00000467326 FAXDC2Q96IV6 333 aa5□□□□□ -1.61
VPS50-209ENST00000467326 NRDE2Q9H7Z3 1164 aa5□□□□□ -1.61
VPS50-209ENST00000467326 MANSC1Q9H8J5 431 aa5□□□□□ -1.61
VPS50-209ENST00000467326 POGKQ9P215 609 aa5□□□□□ -1.61
VPS50-209ENST00000467326 TUBD1Q9UJT1 453 aa5□□□□□ -1.61
VPS50-209ENST00000467326 SIK3Q9Y2K2 1263 aa5□□□□□ -1.61
VPS50-209ENST00000467326 KLHL33A6NCF5 533 aa4.99□□□□□ -1.61
VPS50-209ENST00000467326 LEFTY2O00292 366 aa4.99□□□□□ -1.61
VPS50-209ENST00000467326 WNT10BO00744 389 aa4.99□□□□□ -1.61
VPS50-209ENST00000467326 TEX33O43247 280 aa4.99□□□□□ -1.61
VPS50-209ENST00000467326 ATP5JP18859 108 aa4.99□□□□□ -1.61
VPS50-209ENST00000467326 FPR1P21462 350 aa4.99□□□□□ -1.61
VPS50-209ENST00000467326 C5AR1P21730 350 aa4.99□□□□□ -1.61
VPS50-209ENST00000467326 KRT85P78386 507 aa4.99□□□□□ -1.61
VPS50-209ENST00000467326 ATXN7L2Q5T6C5 722 aaPredicted RBP4.99□□□□□ -1.61
VPS50-209ENST00000467326 LRRC55Q6ZSA7 311 aa4.99□□□□□ -1.61
VPS50-209ENST00000467326 GDF7Q7Z4P5 450 aa4.99□□□□□ -1.61
VPS50-209ENST00000467326 PNMA8AQ86V59 439 aaPredicted RBP4.99□□□□□ -1.61
VPS50-209ENST00000467326 PLXDC1Q8IUK5 500 aa4.99□□□□□ -1.61
VPS50-209ENST00000467326 CCHCR1Q8TD31 782 aa4.99□□□□□ -1.61
VPS50-209ENST00000467326 UBE2Q2Q8WVN8 375 aa4.99□□□□□ -1.61
VPS50-209ENST00000467326 NRG4Q8WWG1 115 aa4.99□□□□□ -1.61
VPS50-209ENST00000467326 CLIP3Q96DZ5 547 aa4.99□□□□□ -1.61
VPS50-209ENST00000467326 FUBP3Q96I24 572 aaKnown RBP eCLIP4.99□□□□□ -1.61
VPS50-209ENST00000467326 GPATCH3Q96I76 525 aa4.99□□□□□ -1.61
VPS50-209ENST00000467326 TEKT5Q96M29 485 aa4.99□□□□□ -1.61
VPS50-209ENST00000467326 DCLRE1CQ96SD1 692 aaKnown RBP4.99□□□□□ -1.61
VPS50-209ENST00000467326 PSMD1Q99460 953 aa4.99□□□□□ -1.61
VPS50-209ENST00000467326 C7orf25Q9BPX7 421 aa4.99□□□□□ -1.61
VPS50-209ENST00000467326 SLC46A2Q9BY10 475 aa4.99□□□□□ -1.61
VPS50-209ENST00000467326 BRINP2Q9C0B6 783 aa4.99□□□□□ -1.61
VPS50-209ENST00000467326 WDR26Q9H7D7 661 aa4.99□□□□□ -1.61
VPS50-209ENST00000467326 GPRC5BQ9NZH0 403 aa4.99□□□□□ -1.61
VPS50-209ENST00000467326 TRPM5Q9NZQ8 1165 aa4.99□□□□□ -1.61
VPS50-209ENST00000467326 ING1Q9UK53 422 aaPredicted RBP4.99□□□□□ -1.61
VPS50-209ENST00000467326 CHST2Q9Y4C5 530 aa4.99□□□□□ -1.61
VPS50-209ENST00000467326 AHRRA9YTQ3 701 aa4.98□□□□□ -1.61
VPS50-209ENST00000467326 PCDHGA12O60330 932 aa4.98□□□□□ -1.61
VPS50-209ENST00000467326 PPFIA4O75335 1185 aa4.98□□□□□ -1.61
VPS50-209ENST00000467326 ZSCAN20P17040 1043 aaPredicted RBP4.98□□□□□ -1.61
VPS50-209ENST00000467326 IBSPP21815 317 aaPredicted RBP4.98□□□□□ -1.61
VPS50-209ENST00000467326 NR4A1P22736 598 aa4.98□□□□□ -1.61
VPS50-209ENST00000467326 PCSK1P29120 753 aa4.98□□□□□ -1.61
VPS50-209ENST00000467326 RNASE9P60153 205 aaKnown RBP4.98□□□□□ -1.61
VPS50-209ENST00000467326 TGFB2P61812 414 aa4.98□□□□□ -1.61
VPS50-209ENST00000467326 FHL2Q14192 279 aa4.98□□□□□ -1.61
VPS50-209ENST00000467326 PTPN21Q16825 1174 aa4.98□□□□□ -1.61
VPS50-209ENST00000467326 NEU4Q8WWR8 484 aaPredicted RBP4.98□□□□□ -1.61
VPS50-209ENST00000467326 DPF2Q92785 391 aa4.98□□□□□ -1.61
VPS50-209ENST00000467326 HAS1Q92839 578 aa4.98□□□□□ -1.61
VPS50-209ENST00000467326 CYFIP2Q96F07 1278 aa4.98□□□□□ -1.61
VPS50-209ENST00000467326 MRI1Q9BV20 369 aa4.98□□□□□ -1.61
VPS50-209ENST00000467326 ASPSCR1Q9BZE9 553 aa4.98□□□□□ -1.61
VPS50-209ENST00000467326 HOMER2Q9NSB8 354 aa4.98□□□□□ -1.61
VPS50-209ENST00000467326 INTUQ9ULD6 942 aa4.98□□□□□ -1.61
VPS50-209ENST00000467326 RUVBL1Q9Y265 456 aaKnown RBP4.98□□□□□ -1.61
VPS50-209ENST00000467326 PCDHGA9Q9Y5G4 932 aaKnown RBP4.98□□□□□ -1.61
VPS50-209ENST00000467326 PCDHGA8Q9Y5G5 932 aa4.98□□□□□ -1.61
VPS50-209ENST00000467326 PCDHGA7Q9Y5G6 932 aa4.98□□□□□ -1.61
VPS50-209ENST00000467326 PCDHGA6Q9Y5G7 932 aa4.98□□□□□ -1.61
VPS50-209ENST00000467326 PCDHGA3Q9Y5H0 932 aa4.98□□□□□ -1.61
VPS50-209ENST00000467326 ACTL7AQ9Y615 435 aa4.98□□□□□ -1.61
VPS50-209ENST00000467326 DIRC3C9JPN6 131 aa4.97□□□□□ -1.61
VPS50-209ENST00000467326 SPATA31D3P0C874 917 aa4.97□□□□□ -1.61
VPS50-209ENST00000467326 WASP42768 502 aa4.97□□□□□ -1.61
VPS50-209ENST00000467326 CHN2P52757 468 aa4.97□□□□□ -1.61
VPS50-209ENST00000467326 PTTG1IPP53801 180 aa4.97□□□□□ -1.61
VPS50-209ENST00000467326 FAM189BP81408 668 aa4.97□□□□□ -1.61
VPS50-209ENST00000467326 MTM1Q13496 603 aa4.97□□□□□ -1.61
VPS50-209ENST00000467326 PCBP2Q15366 365 aaKnown RBP eCLIP4.97□□□□□ -1.61
VPS50-209ENST00000467326 OTUD7BQ6GQQ9 843 aa4.97□□□□□ -1.61
VPS50-209ENST00000467326 KCNV1Q6PIU1 500 aa4.97□□□□□ -1.61
VPS50-209ENST00000467326 SPATA31D4Q6ZUB0 917 aa4.97□□□□□ -1.61
VPS50-209ENST00000467326 RHOT1Q8IXI2 618 aa4.97□□□□□ -1.61
VPS50-209ENST00000467326 ZGPATQ8N5A5 531 aaKnown RBP4.97□□□□□ -1.61
VPS50-209ENST00000467326 AMER2Q8N7J2 671 aa4.97□□□□□ -1.61
VPS50-209ENST00000467326 STON2Q8WXE9 905 aa4.97□□□□□ -1.61
VPS50-209ENST00000467326 LENG9Q96B70 501 aa4.97□□□□□ -1.61
VPS50-209ENST00000467326 PHACTR3Q96KR7 559 aa4.97□□□□□ -1.61
VPS50-209ENST00000467326 NEU1Q99519 415 aa4.97□□□□□ -1.61
VPS50-209ENST00000467326 ZNF768Q9H5H4 540 aaKnown RBP4.97□□□□□ -1.61
VPS50-209ENST00000467326 NOP58Q9Y2X3 529 aaKnown RBP4.97□□□□□ -1.61
VPS50-209ENST00000467326 WASHC2CQ9Y4E1 1318 aa4.97□□□□□ -1.61
VPS50-209ENST00000467326 GAGE12BA1L429 117 aa4.96□□□□□ -1.62
VPS50-209ENST00000467326 GAGE12HA6NDE8 117 aa4.96□□□□□ -1.62
VPS50-209ENST00000467326 RNASET2O00584 256 aaKnown RBP4.96□□□□□ -1.62
VPS50-209ENST00000467326 NCR1O76036 304 aa4.96□□□□□ -1.62
VPS50-209ENST00000467326 AMY1AP04745 511 aa4.96□□□□□ -1.62
VPS50-209ENST00000467326 ITGB1P05556 798 aa4.96□□□□□ -1.62
VPS50-209ENST00000467326 LAG3P18627 525 aa4.96□□□□□ -1.62
VPS50-209ENST00000467326 KIF23Q02241 960 aaPredicted RBP4.96□□□□□ -1.62
VPS50-209ENST00000467326 TIGD2Q4W5G0 525 aa4.96□□□□□ -1.62
VPS50-209ENST00000467326 PDCD4Q53EL6 469 aaKnown RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms