RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 PIN4Q9Y237 131 aaKnown RBP10.87□□□□□ -0.67
USP39-212ENST00000465514 CYP46A1Q9Y6A2 500 aa10.87□□□□□ -0.67
USP39-212ENST00000465514 CELSR3Q9NYQ7 3312 aa10.86□□□□□ -0.67
USP39-212ENST00000465514 F8W810 466 aa10.86□□□□□ -0.67
USP39-212ENST00000465514 GIPC1O14908 333 aa10.86□□□□□ -0.67
USP39-212ENST00000465514 TOP3BO95985 862 aaKnown RBP10.86□□□□□ -0.67
USP39-212ENST00000465514 SFPQP23246 707 aaKnown RBP eCLIP10.86□□□□□ -0.67
USP39-212ENST00000465514 RAB27AP51159 221 aa10.86□□□□□ -0.67
USP39-212ENST00000465514 NOVA1P51513 510 aaKnown RBP10.86□□□□□ -0.67
USP39-212ENST00000465514 PSMC5P62195 406 aa10.86□□□□□ -0.67
USP39-212ENST00000465514 DSG1Q02413 1049 aa10.86□□□□□ -0.67
USP39-212ENST00000465514 ZNF252P-AS1Q0IIN9 211 aa10.86□□□□□ -0.67
USP39-212ENST00000465514 INF2Q27J81 1249 aa10.86□□□□□ -0.67
USP39-212ENST00000465514 PLA2G4FQ68DD2 849 aa10.86□□□□□ -0.67
USP39-212ENST00000465514 HEATR6Q6AI08 1181 aaKnown RBP10.86□□□□□ -0.67
USP39-212ENST00000465514 GALNT17Q6IS24 598 aa10.86□□□□□ -0.67
USP39-212ENST00000465514 MOXD1Q6UVY6 613 aa10.86□□□□□ -0.67
USP39-212ENST00000465514 AGMOQ6ZNB7 445 aa10.86□□□□□ -0.67
USP39-212ENST00000465514 ANO5Q75V66 913 aa10.86□□□□□ -0.67
USP39-212ENST00000465514 ZNF410Q86VK4 478 aa10.86□□□□□ -0.67
USP39-212ENST00000465514 KSR1Q8IVT5 923 aa10.86□□□□□ -0.67
USP39-212ENST00000465514 INO80BQ9C086 356 aaPredicted RBP10.86□□□□□ -0.67
USP39-212ENST00000465514 ARRDC1-AS1Q9H2J1 176 aa10.86□□□□□ -0.67
USP39-212ENST00000465514 DDX25Q9UHL0 483 aaKnown RBP10.86□□□□□ -0.67
USP39-212ENST00000465514 KCNJ14Q9UNX9 436 aa10.86□□□□□ -0.67
USP39-212ENST00000465514 EML1O00423 815 aa10.85□□□□□ -0.67
USP39-212ENST00000465514 AXIN1O15169 862 aa10.85□□□□□ -0.67
USP39-212ENST00000465514 SLC37A4O43826 429 aa10.85□□□□□ -0.67
USP39-212ENST00000465514 EFEMP2O95967 443 aa10.85□□□□□ -0.67
USP39-212ENST00000465514 POMCP01189 267 aa10.85□□□□□ -0.67
USP39-212ENST00000465514 ZNF806P0C7X5 589 aa10.85□□□□□ -0.67
USP39-212ENST00000465514 RPL17P18621 184 aaKnown RBP10.85□□□□□ -0.67
USP39-212ENST00000465514 CNR2P34972 360 aa10.85□□□□□ -0.67
USP39-212ENST00000465514 CXCL12P48061 93 aa10.85□□□□□ -0.67
USP39-212ENST00000465514 LILRA6Q6PI73 481 aa10.85□□□□□ -0.67
USP39-212ENST00000465514 CPLX2Q6PUV4 134 aaKnown RBP10.85□□□□□ -0.67
USP39-212ENST00000465514 CEP68Q76N32 757 aa10.85□□□□□ -0.67
USP39-212ENST00000465514 CATSPER4Q7RTX7 472 aa10.85□□□□□ -0.67
USP39-212ENST00000465514 KRT25Q7Z3Z0 450 aa10.85□□□□□ -0.67
USP39-212ENST00000465514 NPAS3Q8IXF0 933 aa10.85□□□□□ -0.67
USP39-212ENST00000465514 FAM177A1Q8N128 213 aaPredicted RBP10.85□□□□□ -0.67
USP39-212ENST00000465514 ING5Q8WYH8 240 aa10.85□□□□□ -0.67
USP39-212ENST00000465514 NLRP4Q96MN2 994 aa10.85□□□□□ -0.67
USP39-212ENST00000465514 JPH2Q9BR39 696 aaPredicted RBP10.85□□□□□ -0.67
USP39-212ENST00000465514 PLA2G2FQ9BZM2 168 aa10.85□□□□□ -0.67
USP39-212ENST00000465514 TM6SF1Q9BZW5 370 aa10.85□□□□□ -0.67
USP39-212ENST00000465514 SLKQ9H2G2 1235 aaPredicted RBP10.85□□□□□ -0.67
USP39-212ENST00000465514 VWA8A3KMH1 1905 aa10.84□□□□□ -0.67
USP39-212ENST00000465514 CCL16O15467 120 aa10.84□□□□□ -0.67
USP39-212ENST00000465514 EPB41L2O43491 1005 aaKnown RBP10.84□□□□□ -0.67
USP39-212ENST00000465514 ZNF623O75123 536 aa10.84□□□□□ -0.67
USP39-212ENST00000465514 C1RP00736 705 aa10.84□□□□□ -0.67
USP39-212ENST00000465514 OR1G1P47890 313 aa10.84□□□□□ -0.67
USP39-212ENST00000465514 QARSP47897 775 aaKnown RBP10.84□□□□□ -0.67
USP39-212ENST00000465514 NPEPPSP55786 919 aa10.84□□□□□ -0.67
USP39-212ENST00000465514 PPP2R5CQ13362 524 aa10.84□□□□□ -0.67
USP39-212ENST00000465514 SOWAHCQ53LP3 525 aaPredicted RBP10.84□□□□□ -0.67
USP39-212ENST00000465514 LONP2Q86WA8 852 aa10.84□□□□□ -0.67
USP39-212ENST00000465514 PRPF31Q8WWY3 499 aaKnown RBP10.84□□□□□ -0.67
USP39-212ENST00000465514 DNASE1L2Q92874 299 aa10.84□□□□□ -0.67
USP39-212ENST00000465514 PGBD4Q96DM1 585 aa10.84□□□□□ -0.67
USP39-212ENST00000465514 FAM20AQ96MK3 541 aa10.84□□□□□ -0.67
USP39-212ENST00000465514 SCNM1Q9BWG6 230 aa10.84□□□□□ -0.67
USP39-212ENST00000465514 SMOC1Q9H4F8 434 aa10.84□□□□□ -0.67
USP39-212ENST00000465514 RSAD1Q9HA92 442 aa10.84□□□□□ -0.67
USP39-212ENST00000465514 LMAN1LQ9HAT1 526 aa10.84□□□□□ -0.67
USP39-212ENST00000465514 IFT122Q9HBG6 1241 aa10.84□□□□□ -0.67
USP39-212ENST00000465514 KCNMB3Q9NPA1 279 aa10.84□□□□□ -0.67
USP39-212ENST00000465514 PDRG1Q9NUG6 133 aa10.84□□□□□ -0.67
USP39-212ENST00000465514 FBXW11Q9UKB1 542 aa10.84□□□□□ -0.67
USP39-212ENST00000465514 VAV3Q9UKW4 847 aa10.84□□□□□ -0.67
USP39-212ENST00000465514 POLIQ9UNA4 740 aa10.84□□□□□ -0.67
USP39-212ENST00000465514 PCDHB2Q9Y5E7 798 aa10.84□□□□□ -0.67
USP39-212ENST00000465514 NUP205Q92621 2012 aa10.84□□□□□ -0.67
USP39-212ENST00000465514 ARID2Q68CP9 1835 aa10.84□□□□□ -0.67
USP39-212ENST00000465514 CCDC194A0A1B0GVG4 234 aa10.83□□□□□ -0.68
USP39-212ENST00000465514 K7ESF4 209 aa10.83□□□□□ -0.68
USP39-212ENST00000465514 MAN2B1O00754 1011 aa10.83□□□□□ -0.68
USP39-212ENST00000465514 DKC1O60832 514 aaKnown RBP eCLIP10.83□□□□□ -0.68
USP39-212ENST00000465514 ECI2O75521 394 aa10.83□□□□□ -0.68
USP39-212ENST00000465514 P4HBP07237 508 aaKnown RBP10.83□□□□□ -0.68
USP39-212ENST00000465514 HNRNPA1P09651 372 aaKnown RBP eCLIP10.83□□□□□ -0.68
USP39-212ENST00000465514 SRGAP2CP0DJJ0 459 aa10.83□□□□□ -0.68
USP39-212ENST00000465514 GAS6Q14393 721 aa10.83□□□□□ -0.68
USP39-212ENST00000465514 PPM1LQ5SGD2 360 aa10.83□□□□□ -0.68
USP39-212ENST00000465514 LIN9Q5TKA1 542 aa10.83□□□□□ -0.68
USP39-212ENST00000465514 RNF43Q68DV7 783 aa10.83□□□□□ -0.68
USP39-212ENST00000465514 COLGALT2Q8IYK4 626 aa10.83□□□□□ -0.68
USP39-212ENST00000465514 SLC7A3Q8WY07 619 aa10.83□□□□□ -0.68
USP39-212ENST00000465514 TMEM143Q96AN5 459 aa10.83□□□□□ -0.68
USP39-212ENST00000465514 KIF12Q96FN5 646 aa10.83□□□□□ -0.68
USP39-212ENST00000465514 CEP170P1Q96L14 293 aa10.83□□□□□ -0.68
USP39-212ENST00000465514 DCBLD2Q96PD2 775 aa10.83□□□□□ -0.68
USP39-212ENST00000465514 MINDY3Q9H8M7 445 aa10.83□□□□□ -0.68
USP39-212ENST00000465514 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.83□□□□□ -0.68
USP39-212ENST00000465514 CHST7Q9NS84 486 aa10.83□□□□□ -0.68
USP39-212ENST00000465514 AGPAT5Q9NUQ2 364 aa10.83□□□□□ -0.68
USP39-212ENST00000465514 HCFC1R1Q9NWW0 138 aa10.83□□□□□ -0.68
USP39-212ENST00000465514 FNIP2Q9P278 1114 aa10.83□□□□□ -0.68
USP39-212ENST00000465514 KANSL3Q9P2N6 904 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms