RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 HOMER1Q86YM7 354 aa6.13□□□□□ -1.43
UBR4-209ENST00000465036 SPTLC3Q9NUV7 552 aa6.13□□□□□ -1.43
UBR4-209ENST00000465036 POGKQ9P215 609 aa6.13□□□□□ -1.43
UBR4-209ENST00000465036 CD2APQ9Y5K6 639 aa6.13□□□□□ -1.43
UBR4-209ENST00000465036 CDY2AQ9Y6F7 541 aa6.13□□□□□ -1.43
UBR4-209ENST00000465036 UHRF1BP1LA0JNW5 1464 aa6.13□□□□□ -1.43
UBR4-209ENST00000465036 MAPKBP1O60336 1514 aa6.13□□□□□ -1.43
UBR4-209ENST00000465036 SAMD9Q5K651 1589 aa6.13□□□□□ -1.43
UBR4-209ENST00000465036 PRAMEF4O60810 478 aa6.12□□□□□ -1.43
UBR4-209ENST00000465036 SPDEFO95238 335 aa6.12□□□□□ -1.43
UBR4-209ENST00000465036 CFIP05156 583 aa6.12□□□□□ -1.43
UBR4-209ENST00000465036 CDK4P11802 303 aa6.12□□□□□ -1.43
UBR4-209ENST00000465036 CTSSP25774 331 aa6.12□□□□□ -1.43
UBR4-209ENST00000465036 CXCR5P32302 372 aa6.12□□□□□ -1.43
UBR4-209ENST00000465036 MPLP40238 635 aa6.12□□□□□ -1.43
UBR4-209ENST00000465036 FLT3LGP49771 235 aa6.12□□□□□ -1.43
UBR4-209ENST00000465036 GOLGA3Q08378 1498 aa6.12□□□□□ -1.43
UBR4-209ENST00000465036 MPP3Q13368 585 aa6.12□□□□□ -1.43
UBR4-209ENST00000465036 TP53BP2Q13625 1128 aa6.12□□□□□ -1.43
UBR4-209ENST00000465036 TRIM25Q14258 630 aaKnown RBP6.12□□□□□ -1.43
UBR4-209ENST00000465036 FHOD3Q2V2M9 1422 aa6.12□□□□□ -1.43
UBR4-209ENST00000465036 ABCC10Q5T3U5 1492 aa6.12□□□□□ -1.43
UBR4-209ENST00000465036 AGAP9Q5VTM2 703 aa6.12□□□□□ -1.43
UBR4-209ENST00000465036 C16orf86Q6ZW13 317 aa6.12□□□□□ -1.43
UBR4-209ENST00000465036 SREK1Q8WXA9 508 aaKnown RBP6.12□□□□□ -1.43
UBR4-209ENST00000465036 ASB10Q8WXI3 467 aa6.12□□□□□ -1.43
UBR4-209ENST00000465036 ZSWIM4Q9H7M6 989 aa6.12□□□□□ -1.43
UBR4-209ENST00000465036 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.12□□□□□ -1.43
UBR4-209ENST00000465036 DIP2BQ9P265 1576 aa6.12□□□□□ -1.43
UBR4-209ENST00000465036 KDM5BQ9UGL1 1544 aa6.12□□□□□ -1.43
UBR4-209ENST00000465036 ABCA8O94911 1581 aa6.11□□□□□ -1.43
UBR4-209ENST00000465036 SPATA31A6Q5VVP1 1343 aa6.11□□□□□ -1.43
UBR4-209ENST00000465036 CDK11BP21127 795 aaKnown RBP6.11□□□□□ -1.43
UBR4-209ENST00000465036 RESTQ13127 1097 aa6.11□□□□□ -1.43
UBR4-209ENST00000465036 PCBP1Q15365 356 aaKnown RBP eCLIP6.11□□□□□ -1.43
UBR4-209ENST00000465036 FAM47AQ5JRC9 791 aa6.11□□□□□ -1.43
UBR4-209ENST00000465036 C11orf74Q86VG3 221 aa6.11□□□□□ -1.43
UBR4-209ENST00000465036 RASSF3Q86WH2 238 aa6.11□□□□□ -1.43
UBR4-209ENST00000465036 CAGE1Q8TC20 777 aa6.11□□□□□ -1.43
UBR4-209ENST00000465036 GPR101Q96P66 508 aaPredicted RBP6.11□□□□□ -1.43
UBR4-209ENST00000465036 ANO3Q9BYT9 981 aa6.11□□□□□ -1.43
UBR4-209ENST00000465036 ZCCHC11Q5TAX3 1644 aaKnown RBP6.1□□□□□ -1.43
UBR4-209ENST00000465036 LCHNA4D1U4 455 aa6.1□□□□□ -1.43
UBR4-209ENST00000465036 UNC119BA6NIH7 251 aa6.1□□□□□ -1.43
UBR4-209ENST00000465036 DRGXA6NNA5 263 aa6.1□□□□□ -1.43
UBR4-209ENST00000465036 KDM1AO60341 852 aa6.1□□□□□ -1.43
UBR4-209ENST00000465036 PHF2O75151 1096 aa6.1□□□□□ -1.43
UBR4-209ENST00000465036 FOSP01100 380 aaPredicted RBP6.1□□□□□ -1.43
UBR4-209ENST00000465036 ADCYAP1R1P41586 468 aa6.1□□□□□ -1.43
UBR4-209ENST00000465036 SCAPQ12770 1279 aa6.1□□□□□ -1.43
UBR4-209ENST00000465036 GJC2Q5T442 439 aaPredicted RBP6.1□□□□□ -1.43
UBR4-209ENST00000465036 RHOT2Q8IXI1 618 aa6.1□□□□□ -1.43
UBR4-209ENST00000465036 OR2W6PQ8NHA6 318 aa6.1□□□□□ -1.43
UBR4-209ENST00000465036 MDM1Q8TC05 714 aa6.1□□□□□ -1.43
UBR4-209ENST00000465036 ZNF480Q8WV37 535 aa6.1□□□□□ -1.43
UBR4-209ENST00000465036 CEP95Q96GE4 821 aa6.1□□□□□ -1.43
UBR4-209ENST00000465036 NAF1Q96HR8 494 aaKnown RBP6.1□□□□□ -1.43
UBR4-209ENST00000465036 RNPC3Q96LT9 517 aaKnown RBP6.1□□□□□ -1.43
UBR4-209ENST00000465036 NEU1Q99519 415 aa6.1□□□□□ -1.43
UBR4-209ENST00000465036 LRFN3Q9BTN0 628 aa6.1□□□□□ -1.43
UBR4-209ENST00000465036 MS4A5Q9H3V2 200 aa6.1□□□□□ -1.43
UBR4-209ENST00000465036 ATP11BQ9Y2G3 1177 aa6.1□□□□□ -1.43
UBR4-209ENST00000465036 USP15Q9Y4E8 981 aaPredicted RBP6.1□□□□□ -1.43
UBR4-209ENST00000465036 RPTORQ8N122 1335 aa6.09□□□□□ -1.43
UBR4-209ENST00000465036 CDKL5O76039 1030 aa6.09□□□□□ -1.43
UBR4-209ENST00000465036 FKBP9O95302 570 aa6.09□□□□□ -1.43
UBR4-209ENST00000465036 CLRN1P58418 232 aa6.09□□□□□ -1.43
UBR4-209ENST00000465036 NHLH1Q02575 133 aa6.09□□□□□ -1.43
UBR4-209ENST00000465036 SEPT7Q16181 437 aaKnown RBP6.09□□□□□ -1.43
UBR4-209ENST00000465036 PITRM1Q5JRX3 1037 aa6.09□□□□□ -1.43
UBR4-209ENST00000465036 MFSD14BQ5SR56 506 aa6.09□□□□□ -1.43
UBR4-209ENST00000465036 PRAMEF14Q5SWL7 426 aa6.09□□□□□ -1.43
UBR4-209ENST00000465036 CNNM4Q6P4Q7 775 aa6.09□□□□□ -1.43
UBR4-209ENST00000465036 FKBP9P1Q75LS8 142 aa6.09□□□□□ -1.43
UBR4-209ENST00000465036 NIM1KQ8IY84 436 aa6.09□□□□□ -1.43
UBR4-209ENST00000465036 PUS7Q96PZ0 661 aaKnown RBP6.09□□□□□ -1.43
UBR4-209ENST00000465036 EMC7Q9NPA0 242 aa6.09□□□□□ -1.43
UBR4-209ENST00000465036 TMEM74BQ9NUR3 256 aa6.09□□□□□ -1.43
UBR4-209ENST00000465036 FAM30AQ9NZY2 134 aa6.09□□□□□ -1.43
UBR4-209ENST00000465036 RNF181Q9P0P0 153 aa6.09□□□□□ -1.43
UBR4-209ENST00000465036 RAB11FIP3O75154 756 aa6.08□□□□□ -1.44
UBR4-209ENST00000465036 C1RP00736 705 aa6.08□□□□□ -1.44
UBR4-209ENST00000465036 SNRPA1P09661 255 aaKnown RBP6.08□□□□□ -1.44
UBR4-209ENST00000465036 FDXRP22570 491 aa6.08□□□□□ -1.44
UBR4-209ENST00000465036 BROXQ5VW32 411 aa6.08□□□□□ -1.44
UBR4-209ENST00000465036 BOLLQ8N9W6 283 aaKnown RBP6.08□□□□□ -1.44
UBR4-209ENST00000465036 RNF169Q8NCN4 708 aa6.08□□□□□ -1.44
UBR4-209ENST00000465036 SLC5A5Q92911 643 aa6.08□□□□□ -1.44
UBR4-209ENST00000465036 KCTD10Q9H3F6 313 aa6.08□□□□□ -1.44
UBR4-209ENST00000465036 PRDM12Q9H4Q4 367 aa6.08□□□□□ -1.44
UBR4-209ENST00000465036 USP35Q9P2H5 1018 aa6.08□□□□□ -1.44
UBR4-209ENST00000465036 PLAAQ9Y263 795 aa6.08□□□□□ -1.44
UBR4-209ENST00000465036 EPRSP07814 1512 aaKnown RBP6.08□□□□□ -1.44
UBR4-209ENST00000465036 ATP10BO94823 1461 aa6.08□□□□□ -1.44
UBR4-209ENST00000465036 NUP153P49790 1475 aaKnown RBP6.08□□□□□ -1.44
UBR4-209ENST00000465036 ARHGAP35Q9NRY4 1499 aa6.08□□□□□ -1.44
UBR4-209ENST00000465036 TSPOAP1O95153 1857 aa6.07□□□□□ -1.44
UBR4-209ENST00000465036 CHN2P52757 468 aa6.07□□□□□ -1.44
UBR4-209ENST00000465036 IL2P60568 153 aa6.07□□□□□ -1.44
UBR4-209ENST00000465036 MST1LQ2TV78 715 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms