RNA–Protein interactions for RNA: ENST00000464870.5

PTPN7-205, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-205ENST00000464870 PDZD7Q9H5P4 517 aa13.42□□□□□ -0.26
PTPN7-205ENST00000464870 RC3H2Q9HBD1 1191 aaKnown RBP13.42□□□□□ -0.26
PTPN7-205ENST00000464870 CGNQ9P2M7 1197 aaKnown RBP13.42□□□□□ -0.26
PTPN7-205ENST00000464870 TNFSF13BQ9Y275 285 aa13.42□□□□□ -0.26
PTPN7-205ENST00000464870 RWDD3Q9Y3V2 267 aa13.42□□□□□ -0.26
PTPN7-205ENST00000464870 STYXL1Q9Y6J8 313 aa13.42□□□□□ -0.26
PTPN7-205ENST00000464870 CNTNAP2Q9UHC6 1331 aa13.41□□□□□ -0.26
PTPN7-205ENST00000464870 CHD9Q3L8U1 2897 aa13.41□□□□□ -0.26
PTPN7-205ENST00000464870 A0A0B4J269 797 aa13.41□□□□□ -0.26
PTPN7-205ENST00000464870 TULP1O00294 542 aaPredicted RBP13.41□□□□□ -0.26
PTPN7-205ENST00000464870 CLDN3O15551 220 aa13.41□□□□□ -0.26
PTPN7-205ENST00000464870 TOM1L1O75674 476 aa13.41□□□□□ -0.26
PTPN7-205ENST00000464870 FGFR1OPO95684 399 aaKnown RBP13.41□□□□□ -0.26
PTPN7-205ENST00000464870 FGFR1P11362 822 aa13.41□□□□□ -0.26
PTPN7-205ENST00000464870 GARTP22102 1010 aa13.41□□□□□ -0.26
PTPN7-205ENST00000464870 PROZP22891 400 aa13.41□□□□□ -0.26
PTPN7-205ENST00000464870 FANCCQ00597 558 aa13.41□□□□□ -0.26
PTPN7-205ENST00000464870 MYBPC2Q14324 1141 aa13.41□□□□□ -0.26
PTPN7-205ENST00000464870 KRT31Q15323 416 aa13.41□□□□□ -0.26
PTPN7-205ENST00000464870 ZNF568Q3ZCX4 644 aa13.41□□□□□ -0.26
PTPN7-205ENST00000464870 CCDC40Q4G0X9 1142 aa13.41□□□□□ -0.26
PTPN7-205ENST00000464870 TCP11X2Q5H9J9 407 aa13.41□□□□□ -0.26
PTPN7-205ENST00000464870 SLFN12LQ6IEE8 588 aa13.41□□□□□ -0.26
PTPN7-205ENST00000464870 MPZL3Q6UWV2 235 aa13.41□□□□□ -0.26
PTPN7-205ENST00000464870 ZNF598Q86UK7 904 aaKnown RBP13.41□□□□□ -0.26
PTPN7-205ENST00000464870 CBWD2Q8IUF1 395 aa13.41□□□□□ -0.26
PTPN7-205ENST00000464870 XXYLT1Q8NBI6 393 aa13.41□□□□□ -0.26
PTPN7-205ENST00000464870 MYLIPQ8WY64 445 aa13.41□□□□□ -0.26
PTPN7-205ENST00000464870 RSPH1Q8WYR4 309 aa13.41□□□□□ -0.26
PTPN7-205ENST00000464870 FAM213AQ9BRX8 229 aa13.41□□□□□ -0.26
PTPN7-205ENST00000464870 MSTO1Q9BUK6 570 aa13.41□□□□□ -0.26
PTPN7-205ENST00000464870 TRIM6Q9C030 488 aaPredicted RBP13.41□□□□□ -0.26
PTPN7-205ENST00000464870 CDT1Q9H211 546 aa13.41□□□□□ -0.26
PTPN7-205ENST00000464870 TAB2Q9NYJ8 693 aa13.41□□□□□ -0.26
PTPN7-205ENST00000464870 MAGEC2Q9UBF1 373 aaPredicted RBP13.41□□□□□ -0.26
PTPN7-205ENST00000464870 AGO2Q9UKV8 859 aaKnown RBP13.41□□□□□ -0.26
PTPN7-205ENST00000464870 MTUS1Q9ULD2 1270 aa13.41□□□□□ -0.26
PTPN7-205ENST00000464870 PCDHB2Q9Y5E7 798 aa13.41□□□□□ -0.26
PTPN7-205ENST00000464870 A0A1B0GUA9 196 aa13.4□□□□□ -0.26
PTPN7-205ENST00000464870 NPTXRO95502 500 aa13.4□□□□□ -0.26
PTPN7-205ENST00000464870 ADRB2P07550 413 aa13.4□□□□□ -0.26
PTPN7-205ENST00000464870 ATF7P17544 494 aaPredicted RBP13.4□□□□□ -0.26
PTPN7-205ENST00000464870 PSMC2P35998 433 aaKnown RBP13.4□□□□□ -0.26
PTPN7-205ENST00000464870 MTIF2P46199 727 aaKnown RBP13.4□□□□□ -0.26
PTPN7-205ENST00000464870 ACOT2P49753 483 aa13.4□□□□□ -0.26
PTPN7-205ENST00000464870 MRE11P49959 708 aa13.4□□□□□ -0.26
PTPN7-205ENST00000464870 GATMP50440 423 aa13.4□□□□□ -0.26
PTPN7-205ENST00000464870 OSTNP61366 133 aa13.4□□□□□ -0.26
PTPN7-205ENST00000464870 MCL1Q07820 350 aa13.4□□□□□ -0.26
PTPN7-205ENST00000464870 SPOUT1Q5T280 376 aaKnown RBP13.4□□□□□ -0.26
PTPN7-205ENST00000464870 SLC27A1Q6PCB7 646 aa13.4□□□□□ -0.26
PTPN7-205ENST00000464870 CRELD2Q6UXH1 353 aaPredicted RBP13.4□□□□□ -0.26
PTPN7-205ENST00000464870 MRPL10Q7Z7H8 261 aaKnown RBP13.4□□□□□ -0.26
PTPN7-205ENST00000464870 FAM114A1Q8IWE2 563 aa13.4□□□□□ -0.26
PTPN7-205ENST00000464870 TMEM192Q8IY95 271 aa13.4□□□□□ -0.26
PTPN7-205ENST00000464870 FAM186BQ8IYM0 893 aa13.4□□□□□ -0.26
PTPN7-205ENST00000464870 THNSL1Q8IYQ7 743 aa13.4□□□□□ -0.26
PTPN7-205ENST00000464870 HACE1Q8IYU2 909 aa13.4□□□□□ -0.26
PTPN7-205ENST00000464870 GPD1LQ8N335 351 aa13.4□□□□□ -0.26
PTPN7-205ENST00000464870 CEP120Q8N960 986 aa13.4□□□□□ -0.26
PTPN7-205ENST00000464870 FBXO22Q8NEZ5 403 aa13.4□□□□□ -0.26
PTPN7-205ENST00000464870 BORCS6Q96GS4 357 aa13.4□□□□□ -0.26
PTPN7-205ENST00000464870 NAP1L5Q96NT1 182 aaPredicted RBP13.4□□□□□ -0.26
PTPN7-205ENST00000464870 ADPGKQ9BRR6 497 aa13.4□□□□□ -0.26
PTPN7-205ENST00000464870 C17orf80Q9BSJ5 609 aa13.4□□□□□ -0.26
PTPN7-205ENST00000464870 EIF2AQ9BY44 585 aaKnown RBP13.4□□□□□ -0.26
PTPN7-205ENST00000464870 VPS16Q9H269 839 aa13.4□□□□□ -0.26
PTPN7-205ENST00000464870 LIMA1Q9UHB6 759 aaKnown RBP13.4□□□□□ -0.26
PTPN7-205ENST00000464870 FRMD4BQ9Y2L6 1034 aa13.4□□□□□ -0.26
PTPN7-205ENST00000464870 MICAL3Q7RTP6 2002 aa13.39□□□□□ -0.27
PTPN7-205ENST00000464870 SZT2Q5T011 3432 aa13.39□□□□□ -0.27
PTPN7-205ENST00000464870 N4BP3O15049 544 aa13.39□□□□□ -0.27
PTPN7-205ENST00000464870 SLC16A3O15427 465 aaKnown RBP13.39□□□□□ -0.27
PTPN7-205ENST00000464870 EXTL3O43909 919 aa13.39□□□□□ -0.27
PTPN7-205ENST00000464870 RB1P06400 928 aa13.39□□□□□ -0.27
PTPN7-205ENST00000464870 EPB41P11171 864 aaKnown RBP13.39□□□□□ -0.27
PTPN7-205ENST00000464870 ITGA4P13612 1032 aa13.39□□□□□ -0.27
PTPN7-205ENST00000464870 FOSL2P15408 326 aa13.39□□□□□ -0.27
PTPN7-205ENST00000464870 IGFBP4P22692 258 aa13.39□□□□□ -0.27
PTPN7-205ENST00000464870 CTNNB1P35222 781 aa13.39□□□□□ -0.27
PTPN7-205ENST00000464870 BMPR1AP36894 532 aa13.39□□□□□ -0.27
PTPN7-205ENST00000464870 TNFSF9P41273 254 aa13.39□□□□□ -0.27
PTPN7-205ENST00000464870 COPB1P53618 953 aaKnown RBP13.39□□□□□ -0.27
PTPN7-205ENST00000464870 NOLC1Q14978 699 aaKnown RBP eCLIP13.39□□□□□ -0.27
PTPN7-205ENST00000464870 EPC2Q52LR7 807 aa13.39□□□□□ -0.27
PTPN7-205ENST00000464870 UBXN11Q5T124 520 aa13.39□□□□□ -0.27
PTPN7-205ENST00000464870 GLB1LQ6UWU2 654 aa13.39□□□□□ -0.27
PTPN7-205ENST00000464870 APTXQ7Z2E3 356 aaKnown RBP13.39□□□□□ -0.27
PTPN7-205ENST00000464870 APBB1IPQ7Z5R6 666 aaPredicted RBP13.39□□□□□ -0.27
PTPN7-205ENST00000464870 SPRED2Q7Z698 418 aa13.39□□□□□ -0.27
PTPN7-205ENST00000464870 PLEKHO2Q8TD55 490 aa13.39□□□□□ -0.27
PTPN7-205ENST00000464870 HELQQ8TDG4 1101 aa13.39□□□□□ -0.27
PTPN7-205ENST00000464870 TMEM174Q8WUU8 243 aa13.39□□□□□ -0.27
PTPN7-205ENST00000464870 CLP1Q92989 425 aaKnown RBP13.39□□□□□ -0.27
PTPN7-205ENST00000464870 LPPQ93052 612 aa13.39□□□□□ -0.27
PTPN7-205ENST00000464870 CASD1Q96PB1 797 aa13.39□□□□□ -0.27
PTPN7-205ENST00000464870 MRPL9Q9BYD2 267 aaKnown RBP13.39□□□□□ -0.27
PTPN7-205ENST00000464870 UBN1Q9NPG3 1134 aa13.39□□□□□ -0.27
PTPN7-205ENST00000464870 AAASQ9NRG9 546 aa13.39□□□□□ -0.27
PTPN7-205ENST00000464870 IFNKQ9P0W0 207 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms