RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 FRMPD4Q14CM0 1322 aa12.3□□□□□ -0.44
TRAPPC3-205ENST00000462715 SSU72P8A0A1W2PR75 194 aa12.3□□□□□ -0.44
TRAPPC3-205ENST00000462715 CCDC188H7C350 402 aa12.3□□□□□ -0.44
TRAPPC3-205ENST00000462715 SNX3O60493 162 aa12.3□□□□□ -0.44
TRAPPC3-205ENST00000462715 MOCS3O95396 460 aa12.3□□□□□ -0.44
TRAPPC3-205ENST00000462715 CCND2P30279 289 aa12.3□□□□□ -0.44
TRAPPC3-205ENST00000462715 STXBP2Q15833 593 aa12.3□□□□□ -0.44
TRAPPC3-205ENST00000462715 MAP3K21Q5TCX8 1036 aa12.3□□□□□ -0.44
TRAPPC3-205ENST00000462715 XRRA1Q6P2D8 792 aa12.3□□□□□ -0.44
TRAPPC3-205ENST00000462715 TMEM154Q6P9G4 183 aa12.3□□□□□ -0.44
TRAPPC3-205ENST00000462715 IRF2BP1Q8IU81 584 aa12.3□□□□□ -0.44
TRAPPC3-205ENST00000462715 STKLD1Q8NE28 680 aa12.3□□□□□ -0.44
TRAPPC3-205ENST00000462715 STK32AQ8WU08 396 aa12.3□□□□□ -0.44
TRAPPC3-205ENST00000462715 SHISA4Q96DD7 197 aa12.3□□□□□ -0.44
TRAPPC3-205ENST00000462715 PDCD2LQ9BRP1 358 aa12.3□□□□□ -0.44
TRAPPC3-205ENST00000462715 MIS12Q9H081 205 aa12.3□□□□□ -0.44
TRAPPC3-205ENST00000462715 RXFP1Q9HBX9 757 aa12.3□□□□□ -0.44
TRAPPC3-205ENST00000462715 VTA1Q9NP79 307 aa12.3□□□□□ -0.44
TRAPPC3-205ENST00000462715 FAM114A2Q9NRY5 505 aa12.3□□□□□ -0.44
TRAPPC3-205ENST00000462715 ITGB1BP2Q9UKP3 347 aa12.3□□□□□ -0.44
TRAPPC3-205ENST00000462715 WDR37Q9Y2I8 494 aa12.3□□□□□ -0.44
TRAPPC3-205ENST00000462715 LRCH1Q9Y2L9 728 aa12.3□□□□□ -0.44
TRAPPC3-205ENST00000462715 DUSP10Q9Y6W6 482 aa12.3□□□□□ -0.44
TRAPPC3-205ENST00000462715 RPTORQ8N122 1335 aa12.3□□□□□ -0.44
TRAPPC3-205ENST00000462715 RBAK-RBAKDNI3L0D1 243 aa12.3□□□□□ -0.44
TRAPPC3-205ENST00000462715 UBOX5O94941 541 aa12.3□□□□□ -0.44
TRAPPC3-205ENST00000462715 GJB6O95452 261 aa12.3□□□□□ -0.44
TRAPPC3-205ENST00000462715 NR3C2P08235 984 aa12.3□□□□□ -0.44
TRAPPC3-205ENST00000462715 NUDT17P0C025 328 aa12.3□□□□□ -0.44
TRAPPC3-205ENST00000462715 TRIM21P19474 475 aaKnown RBP12.3□□□□□ -0.44
TRAPPC3-205ENST00000462715 CACNB2Q08289 660 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC3-205ENST00000462715 PGM5Q15124 567 aa12.3□□□□□ -0.44
TRAPPC3-205ENST00000462715 AGGF1Q8N302 714 aaeCLIP12.3□□□□□ -0.44
TRAPPC3-205ENST00000462715 USP38Q8NB14 1042 aa12.3□□□□□ -0.44
TRAPPC3-205ENST00000462715 RBBP8NLQ8NC74 664 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC3-205ENST00000462715 PTPRN2Q92932 1015 aa12.3□□□□□ -0.44
TRAPPC3-205ENST00000462715 ZNF333Q96JL9 665 aa12.3□□□□□ -0.44
TRAPPC3-205ENST00000462715 INPP4AQ96PE3 977 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC3-205ENST00000462715 TMEM109Q9BVC6 243 aa12.3□□□□□ -0.44
TRAPPC3-205ENST00000462715 ANO3Q9BYT9 981 aa12.3□□□□□ -0.44
TRAPPC3-205ENST00000462715 HMX1Q9NP08 348 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC3-205ENST00000462715 CENPFP49454 3210 aa12.3□□□□□ -0.44
TRAPPC3-205ENST00000462715 ZNF263O14978 683 aa12.29□□□□□ -0.44
TRAPPC3-205ENST00000462715 STAM2O75886 525 aa12.29□□□□□ -0.44
TRAPPC3-205ENST00000462715 SNAI1O95863 264 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC3-205ENST00000462715 MMEP08473 750 aa12.29□□□□□ -0.44
TRAPPC3-205ENST00000462715 KRT16P08779 473 aa12.29□□□□□ -0.44
TRAPPC3-205ENST00000462715 KRT2P35908 639 aa12.29□□□□□ -0.44
TRAPPC3-205ENST00000462715 GRIN1Q05586 938 aa12.29□□□□□ -0.44
TRAPPC3-205ENST00000462715 GSTA3Q16772 222 aa12.29□□□□□ -0.44
TRAPPC3-205ENST00000462715 ADSSL1Q8N142 457 aa12.29□□□□□ -0.44
TRAPPC3-205ENST00000462715 ATP8B4Q8TF62 1192 aa12.29□□□□□ -0.44
TRAPPC3-205ENST00000462715 IRGQQ8WZA9 623 aa12.29□□□□□ -0.44
TRAPPC3-205ENST00000462715 FAM136AQ96C01 138 aa12.29□□□□□ -0.44
TRAPPC3-205ENST00000462715 KRT12Q99456 494 aa12.29□□□□□ -0.44
TRAPPC3-205ENST00000462715 TXLNGQ9NUQ3 528 aa12.29□□□□□ -0.44
TRAPPC3-205ENST00000462715 MYH7BA7E2Y1 1941 aa12.29□□□□□ -0.44
TRAPPC3-205ENST00000462715 AGTP01019 485 aa12.29□□□□□ -0.44
TRAPPC3-205ENST00000462715 MYCLP12524 364 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC3-205ENST00000462715 CYBAP13498 195 aa12.29□□□□□ -0.44
TRAPPC3-205ENST00000462715 MAGEA1P43355 309 aa12.29□□□□□ -0.44
TRAPPC3-205ENST00000462715 MRPS25P82663 173 aaKnown RBP12.29□□□□□ -0.44
TRAPPC3-205ENST00000462715 TRIM32Q13049 653 aa12.29□□□□□ -0.44
TRAPPC3-205ENST00000462715 ACVR2BQ13705 512 aa12.29□□□□□ -0.44
TRAPPC3-205ENST00000462715 SPDYAQ5MJ70 313 aa12.29□□□□□ -0.44
TRAPPC3-205ENST00000462715 PCNX4Q63HM2 1172 aa12.29□□□□□ -0.44
TRAPPC3-205ENST00000462715 DIS3L2Q8IYB7 885 aaKnown RBP12.29□□□□□ -0.44
TRAPPC3-205ENST00000462715 ASAP3Q8TDY4 903 aa12.29□□□□□ -0.44
TRAPPC3-205ENST00000462715 SCFD2Q8WU76 684 aa12.29□□□□□ -0.44
TRAPPC3-205ENST00000462715 SLITRK6Q9H5Y7 841 aa12.29□□□□□ -0.44
TRAPPC3-205ENST00000462715 TMEM260Q9NX78 707 aa12.29□□□□□ -0.44
TRAPPC3-205ENST00000462715 CCDC169A6NNP5 214 aa12.28□□□□□ -0.44
TRAPPC3-205ENST00000462715 BTNL10A8MVZ5 291 aa12.28□□□□□ -0.44
TRAPPC3-205ENST00000462715 F8VZ95 297 aa12.28□□□□□ -0.44
TRAPPC3-205ENST00000462715 RAD51CO43502 376 aa12.28□□□□□ -0.44
TRAPPC3-205ENST00000462715 SREBF1P36956 1147 aa12.28□□□□□ -0.44
TRAPPC3-205ENST00000462715 KIF11P52732 1056 aa12.28□□□□□ -0.44
TRAPPC3-205ENST00000462715 KRT71Q3SY84 523 aa12.28□□□□□ -0.44
TRAPPC3-205ENST00000462715 FAM133BQ5BKY9 247 aaKnown RBP12.28□□□□□ -0.44
TRAPPC3-205ENST00000462715 KRT25Q7Z3Z0 450 aa12.28□□□□□ -0.44
TRAPPC3-205ENST00000462715 VSIG10LQ86VR7 867 aa12.28□□□□□ -0.44
TRAPPC3-205ENST00000462715 LRRC34Q8IZ02 419 aa12.28□□□□□ -0.44
TRAPPC3-205ENST00000462715 ACTRT1Q8TDG2 376 aa12.28□□□□□ -0.44
TRAPPC3-205ENST00000462715 DNAJC9Q8WXX5 260 aa12.28□□□□□ -0.44
TRAPPC3-205ENST00000462715 INPP5DQ92835 1189 aa12.28□□□□□ -0.44
TRAPPC3-205ENST00000462715 NDNQ99608 321 aa12.28□□□□□ -0.44
TRAPPC3-205ENST00000462715 ARL2BPQ9Y2Y0 163 aa12.28□□□□□ -0.44
TRAPPC3-205ENST00000462715 COMMD3-BMI1R4GMX3 469 aa12.28□□□□□ -0.44
TRAPPC3-205ENST00000462715 CCDC194A0A1B0GVG4 234 aa12.28□□□□□ -0.44
TRAPPC3-205ENST00000462715 MAGEA13PA6NCF6 341 aa12.28□□□□□ -0.44
TRAPPC3-205ENST00000462715 MSCO60682 206 aa12.28□□□□□ -0.44
TRAPPC3-205ENST00000462715 TMCC1O94876 653 aa12.28□□□□□ -0.44
TRAPPC3-205ENST00000462715 CCL5P13501 91 aa12.28□□□□□ -0.44
TRAPPC3-205ENST00000462715 CDC25CP30307 473 aa12.28□□□□□ -0.44
TRAPPC3-205ENST00000462715 AFMP43652 599 aa12.28□□□□□ -0.44
TRAPPC3-205ENST00000462715 HLTFQ14527 1009 aaKnown RBP eCLIP12.28□□□□□ -0.44
TRAPPC3-205ENST00000462715 NPY5RQ15761 445 aa12.28□□□□□ -0.44
TRAPPC3-205ENST00000462715 PRAMEF19Q5SWL8 479 aa12.28□□□□□ -0.44
TRAPPC3-205ENST00000462715 MEI1Q5TIA1 1274 aa12.28□□□□□ -0.44
TRAPPC3-205ENST00000462715 RNF43Q68DV7 783 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms