RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 RABGGTAQ92696 567 aa16.86■□□□□ 0.29
VARS-219ENST00000461328 CCDC94Q9BW85 323 aaPredicted RBP16.86■□□□□ 0.29
VARS-219ENST00000461328 PANK2Q9BZ23 570 aa16.86■□□□□ 0.29
VARS-219ENST00000461328 CDT1Q9H211 546 aa16.86■□□□□ 0.29
VARS-219ENST00000461328 ADAM7Q9H2U9 754 aa16.86■□□□□ 0.29
VARS-219ENST00000461328 ADAM28Q9UKQ2 775 aa16.86■□□□□ 0.29
VARS-219ENST00000461328 C5orf42Q9H799 3197 aa16.85■□□□□ 0.29
VARS-219ENST00000461328 CASTOR2A6NHX0 329 aa16.85■□□□□ 0.29
VARS-219ENST00000461328 LOC730098B7Z3J9 87 aa16.85■□□□□ 0.29
VARS-219ENST00000461328 PTGESO14684 152 aa16.85■□□□□ 0.29
VARS-219ENST00000461328 LILRB3O75022 631 aa16.85■□□□□ 0.29
VARS-219ENST00000461328 ADH1AP07327 375 aa16.85■□□□□ 0.29
VARS-219ENST00000461328 NCKAP1LP55160 1127 aa16.85■□□□□ 0.29
VARS-219ENST00000461328 OSTNP61366 133 aa16.85■□□□□ 0.29
VARS-219ENST00000461328 HSP90AA2PQ14568 343 aaPredicted RBP16.85■□□□□ 0.29
VARS-219ENST00000461328 FUT10Q6P4F1 479 aa16.85■□□□□ 0.29
VARS-219ENST00000461328 MPZL3Q6UWV2 235 aa16.85■□□□□ 0.29
VARS-219ENST00000461328 DYMQ7RTS9 669 aa16.85■□□□□ 0.29
VARS-219ENST00000461328 HAUS6Q7Z4H7 955 aa16.85■□□□□ 0.29
VARS-219ENST00000461328 RNF168Q8IYW5 571 aaPredicted RBP16.85■□□□□ 0.29
VARS-219ENST00000461328 C12orf76Q8N812 135 aaPredicted RBP16.85■□□□□ 0.29
VARS-219ENST00000461328 FBXL18Q96ME1 805 aa16.85■□□□□ 0.29
VARS-219ENST00000461328 NECTIN4Q96NY8 510 aa16.85■□□□□ 0.29
VARS-219ENST00000461328 NTPCRQ9BSD7 190 aaKnown RBP16.85■□□□□ 0.29
VARS-219ENST00000461328 LRFN3Q9BTN0 628 aa16.85■□□□□ 0.29
VARS-219ENST00000461328 TOPORSQ9NS56 1045 aaPredicted RBP16.85■□□□□ 0.29
VARS-219ENST00000461328 CACNG4Q9UBN1 327 aa16.85■□□□□ 0.29
VARS-219ENST00000461328 MUTYHQ9UIF7 546 aa16.85■□□□□ 0.29
VARS-219ENST00000461328 CDH22Q9UJ99 828 aa16.85■□□□□ 0.29
VARS-219ENST00000461328 TRAK2O60296 914 aa16.84■□□□□ 0.29
VARS-219ENST00000461328 GPR37L1O60883 481 aa16.84■□□□□ 0.29
VARS-219ENST00000461328 CUTAO60888 179 aa16.84■□□□□ 0.29
VARS-219ENST00000461328 EFEMP2O95967 443 aa16.84■□□□□ 0.29
VARS-219ENST00000461328 MCF2P10911 925 aa16.84■□□□□ 0.29
VARS-219ENST00000461328 ME1P48163 572 aa16.84■□□□□ 0.29
VARS-219ENST00000461328 LIG4P49917 911 aa16.84■□□□□ 0.29
VARS-219ENST00000461328 CLCN4P51793 760 aa16.84■□□□□ 0.29
VARS-219ENST00000461328 ZNF131P52739 623 aa16.84■□□□□ 0.29
VARS-219ENST00000461328 DSG1Q02413 1049 aa16.84■□□□□ 0.29
VARS-219ENST00000461328 NOLC1Q14978 699 aaKnown RBP eCLIP16.84■□□□□ 0.29
VARS-219ENST00000461328 ATL3Q6DD88 541 aa16.84■□□□□ 0.29
VARS-219ENST00000461328 CEP120Q8N960 986 aa16.84■□□□□ 0.29
VARS-219ENST00000461328 RIPOR3Q96MK2 946 aa16.84■□□□□ 0.29
VARS-219ENST00000461328 GPR62Q9BZJ7 368 aa16.84■□□□□ 0.29
VARS-219ENST00000461328 CXCL16Q9H2A7 254 aa16.84■□□□□ 0.29
VARS-219ENST00000461328 C11orf16Q9NQ32 467 aa16.84■□□□□ 0.29
VARS-219ENST00000461328 CFAP45Q9UL16 551 aa16.84■□□□□ 0.29
VARS-219ENST00000461328 SF3B1O75533 1304 aaKnown RBP eCLIP16.84■□□□□ 0.29
VARS-219ENST00000461328 MYH11P35749 1972 aa16.84■□□□□ 0.29
VARS-219ENST00000461328 HNRNPDLO14979 420 aaKnown RBP16.83■□□□□ 0.28
VARS-219ENST00000461328 TEX28O15482 410 aa16.83■□□□□ 0.28
VARS-219ENST00000461328 TOM1L1O75674 476 aa16.83■□□□□ 0.28
VARS-219ENST00000461328 WEE2P0C1S8 567 aa16.83■□□□□ 0.28
VARS-219ENST00000461328 SP100P23497 879 aaPredicted RBP16.83■□□□□ 0.28
VARS-219ENST00000461328 GRM5P41594 1212 aa16.83■□□□□ 0.28
VARS-219ENST00000461328 MTHFRP42898 656 aa16.83■□□□□ 0.28
VARS-219ENST00000461328 DNM1Q05193 864 aaKnown RBP16.83■□□□□ 0.28
VARS-219ENST00000461328 USP41Q3LFD5 358 aa16.83■□□□□ 0.28
VARS-219ENST00000461328 HERC4Q5GLZ8 1057 aaPredicted RBP16.83■□□□□ 0.28
VARS-219ENST00000461328 GLRA4Q5JXX5 417 aa16.83■□□□□ 0.28
VARS-219ENST00000461328 KIAA0319Q5VV43 1072 aa16.83■□□□□ 0.28
VARS-219ENST00000461328 KANK3Q6NY19 840 aa16.83■□□□□ 0.28
VARS-219ENST00000461328 ZPBP2Q6X784 338 aa16.83■□□□□ 0.28
VARS-219ENST00000461328 HASPINQ8TF76 798 aa16.83■□□□□ 0.28
VARS-219ENST00000461328 DDX12PQ92771 950 aa16.83■□□□□ 0.28
VARS-219ENST00000461328 B3GALT6Q96L58 329 aa16.83■□□□□ 0.28
VARS-219ENST00000461328 PAAF1Q9BRP4 392 aa16.83■□□□□ 0.28
VARS-219ENST00000461328 SFXN1Q9H9B4 322 aa16.83■□□□□ 0.28
VARS-219ENST00000461328 TSHZ2Q9NRE2 1034 aa16.83■□□□□ 0.28
VARS-219ENST00000461328 CHST7Q9NS84 486 aa16.83■□□□□ 0.28
VARS-219ENST00000461328 A0A087X0B3 334 aa16.82■□□□□ 0.28
VARS-219ENST00000461328 MYMKA6NI61 221 aa16.82■□□□□ 0.28
VARS-219ENST00000461328 CLDN3O15551 220 aa16.82■□□□□ 0.28
VARS-219ENST00000461328 KIF4AO95239 1232 aa16.82■□□□□ 0.28
VARS-219ENST00000461328 IDEP14735 1019 aa16.82■□□□□ 0.28
VARS-219ENST00000461328 SCP2P22307 547 aa16.82■□□□□ 0.28
VARS-219ENST00000461328 ABCD1P33897 745 aa16.82■□□□□ 0.28
VARS-219ENST00000461328 ATAT1Q5SQI0 421 aa16.82■□□□□ 0.28
VARS-219ENST00000461328 ELMSAN1Q6PJG2 1045 aa16.82■□□□□ 0.28
VARS-219ENST00000461328 TMC5Q6UXY8 1006 aa16.82■□□□□ 0.28
VARS-219ENST00000461328 SFR1Q86XK3 245 aa16.82■□□□□ 0.28
VARS-219ENST00000461328 RIN2Q8WYP3 895 aaPredicted RBP16.82■□□□□ 0.28
VARS-219ENST00000461328 DHX58Q96C10 678 aa16.82■□□□□ 0.28
VARS-219ENST00000461328 ZBTB45Q96K62 511 aaPredicted RBP16.82■□□□□ 0.28
VARS-219ENST00000461328 ACAP3Q96P50 834 aa16.82■□□□□ 0.28
VARS-219ENST00000461328 POMKQ9H5K3 350 aa16.82■□□□□ 0.28
VARS-219ENST00000461328 RXFP1Q9HBX9 757 aa16.82■□□□□ 0.28
VARS-219ENST00000461328 PTPRHQ9HD43 1115 aa16.82■□□□□ 0.28
VARS-219ENST00000461328 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.82■□□□□ 0.28
VARS-219ENST00000461328 TBX20Q9UMR3 447 aa16.82■□□□□ 0.28
VARS-219ENST00000461328 NR2E1Q9Y466 385 aa16.82■□□□□ 0.28
VARS-219ENST00000461328 PRR33A8MZF0 331 aa16.81■□□□□ 0.28
VARS-219ENST00000461328 BRD1O95696 1058 aa16.81■□□□□ 0.28
VARS-219ENST00000461328 GLUD1P00367 558 aa16.81■□□□□ 0.28
VARS-219ENST00000461328 PROZP22891 400 aa16.81■□□□□ 0.28
VARS-219ENST00000461328 NMT1P30419 496 aaKnown RBP16.81■□□□□ 0.28
VARS-219ENST00000461328 CREMQ03060 361 aa16.81■□□□□ 0.28
VARS-219ENST00000461328 NAB2Q15742 525 aa16.81■□□□□ 0.28
VARS-219ENST00000461328 GPR65Q8IYL9 337 aa16.81■□□□□ 0.28
VARS-219ENST00000461328 PPP1R10Q96QC0 940 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms