RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 CCDC51Q96ER9 411 aa6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 FAM20AQ96MK3 541 aa6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 CLSTN3Q9BQT9 956 aa6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 C22orf23Q9BZE7 217 aa6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 TMEM60Q9H2L4 133 aa6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 ZSWIM4Q9H7M6 989 aa6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 PDRG1Q9NUG6 133 aa6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 ZDHHC7Q9NXF8 308 aa6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 SNTG2Q9NY99 539 aa6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 KANSL3Q9P2N6 904 aa6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 ORC3Q9UBD5 711 aaPredicted RBP6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 CDH7Q9ULB5 785 aa6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 SMG5Q9UPR3 1016 aaKnown RBP6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 STK36Q9NRP7 1315 aa6.64□□□□□ -1.35
HLA-DPA3-207ENST00000454398 MED24O75448 989 aa6.63□□□□□ -1.35
HLA-DPA3-207ENST00000454398 HARSP12081 509 aaKnown RBP6.63□□□□□ -1.35
HLA-DPA3-207ENST00000454398 FDPSP14324 419 aaKnown RBP6.63□□□□□ -1.35
HLA-DPA3-207ENST00000454398 MCM7P33993 719 aa6.63□□□□□ -1.35
HLA-DPA3-207ENST00000454398 OR1D2P34982 312 aa6.63□□□□□ -1.35
HLA-DPA3-207ENST00000454398 KRT2P35908 639 aa6.63□□□□□ -1.35
HLA-DPA3-207ENST00000454398 ARL2P36404 184 aa6.63□□□□□ -1.35
HLA-DPA3-207ENST00000454398 TXKP42681 527 aa6.63□□□□□ -1.35
HLA-DPA3-207ENST00000454398 BRCC3P46736 316 aa6.63□□□□□ -1.35
HLA-DPA3-207ENST00000454398 ARPP19P56211 112 aa6.63□□□□□ -1.35
HLA-DPA3-207ENST00000454398 OSTNP61366 133 aa6.63□□□□□ -1.35
HLA-DPA3-207ENST00000454398 CSTF1Q05048 431 aaKnown RBP6.63□□□□□ -1.35
HLA-DPA3-207ENST00000454398 SOX4Q06945 474 aaPredicted RBP6.63□□□□□ -1.35
HLA-DPA3-207ENST00000454398 TUSC3Q13454 348 aa6.63□□□□□ -1.35
HLA-DPA3-207ENST00000454398 MXD4Q14582 209 aaPredicted RBP6.63□□□□□ -1.35
HLA-DPA3-207ENST00000454398 NBR1Q14596 966 aa6.63□□□□□ -1.35
HLA-DPA3-207ENST00000454398 NAB2Q15742 525 aa6.63□□□□□ -1.35
HLA-DPA3-207ENST00000454398 RSPO4Q2I0M5 234 aaPredicted RBP6.63□□□□□ -1.35
HLA-DPA3-207ENST00000454398 PABPC1LQ4VXU2 614 aaKnown RBP6.63□□□□□ -1.35
HLA-DPA3-207ENST00000454398 WDR44Q5JSH3 913 aa6.63□□□□□ -1.35
HLA-DPA3-207ENST00000454398 CDCA2Q69YH5 1023 aaPredicted RBP6.63□□□□□ -1.35
HLA-DPA3-207ENST00000454398 PPP4R3AQ6IN85 833 aa6.63□□□□□ -1.35
HLA-DPA3-207ENST00000454398 ELMSAN1Q6PJG2 1045 aa6.63□□□□□ -1.35
HLA-DPA3-207ENST00000454398 CPLX2Q6PUV4 134 aaKnown RBP6.63□□□□□ -1.35
HLA-DPA3-207ENST00000454398 SUMF1Q8NBK3 374 aa6.63□□□□□ -1.35
HLA-DPA3-207ENST00000454398 LNX1Q8TBB1 728 aaPredicted RBP6.63□□□□□ -1.35
HLA-DPA3-207ENST00000454398 PIK3R5Q8WYR1 880 aa6.63□□□□□ -1.35
HLA-DPA3-207ENST00000454398 RSPH1Q8WYR4 309 aa6.63□□□□□ -1.35
HLA-DPA3-207ENST00000454398 TCEAL4Q96EI5 215 aa6.63□□□□□ -1.35
HLA-DPA3-207ENST00000454398 DDX27Q96GQ7 796 aaKnown RBP6.63□□□□□ -1.35
HLA-DPA3-207ENST00000454398 CNTNAP3BQ96NU0 1288 aa6.63□□□□□ -1.35
HLA-DPA3-207ENST00000454398 TTPALQ9BTX7 342 aa6.63□□□□□ -1.35
HLA-DPA3-207ENST00000454398 COLEC11Q9BWP8 271 aa6.63□□□□□ -1.35
HLA-DPA3-207ENST00000454398 CNTNAP3Q9BZ76 1288 aa6.63□□□□□ -1.35
HLA-DPA3-207ENST00000454398 PLA2G2FQ9BZM2 168 aa6.63□□□□□ -1.35
HLA-DPA3-207ENST00000454398 PLEKHA4Q9H4M7 779 aa6.63□□□□□ -1.35
HLA-DPA3-207ENST00000454398 TTC12Q9H892 705 aaPredicted RBP6.63□□□□□ -1.35
HLA-DPA3-207ENST00000454398 SLC2A4RGQ9NR83 387 aa6.63□□□□□ -1.35
HLA-DPA3-207ENST00000454398 HEBP1Q9NRV9 189 aa6.63□□□□□ -1.35
HLA-DPA3-207ENST00000454398 NCDNQ9UBB6 729 aa6.63□□□□□ -1.35
HLA-DPA3-207ENST00000454398 NDRG2Q9UN36 371 aaKnown RBP6.63□□□□□ -1.35
HLA-DPA3-207ENST00000454398 GIT1Q9Y2X7 761 aa6.63□□□□□ -1.35
HLA-DPA3-207ENST00000454398 CDY1Q9Y6F8 540 aa6.63□□□□□ -1.35
HLA-DPA3-207ENST00000454398 TSC2P49815 1807 aa6.62□□□□□ -1.35
HLA-DPA3-207ENST00000454398 A0A1B0GUA9 196 aa6.62□□□□□ -1.35
HLA-DPA3-207ENST00000454398 KANSL1LA0AUZ9 987 aa6.62□□□□□ -1.35
HLA-DPA3-207ENST00000454398 FAM170BA6NMN3 283 aa6.62□□□□□ -1.35
HLA-DPA3-207ENST00000454398 BTBD18B2RXH4 712 aa6.62□□□□□ -1.35
HLA-DPA3-207ENST00000454398 DKC1O60832 514 aaKnown RBP eCLIP6.62□□□□□ -1.35
HLA-DPA3-207ENST00000454398 KINO60870 393 aaKnown RBP6.62□□□□□ -1.35
HLA-DPA3-207ENST00000454398 NR1I2O75469 434 aa6.62□□□□□ -1.35
HLA-DPA3-207ENST00000454398 DGAT1O75907 488 aa6.62□□□□□ -1.35
HLA-DPA3-207ENST00000454398 CDKL5O76039 1030 aa6.62□□□□□ -1.35
HLA-DPA3-207ENST00000454398 B3GAT3O94766 335 aa6.62□□□□□ -1.35
HLA-DPA3-207ENST00000454398 SPATA31C1P0DKV0 1188 aa6.62□□□□□ -1.35
HLA-DPA3-207ENST00000454398 GJA1P17302 382 aa6.62□□□□□ -1.35
HLA-DPA3-207ENST00000454398 TGM1P22735 817 aa6.62□□□□□ -1.35
HLA-DPA3-207ENST00000454398 FCARP24071 287 aa6.62□□□□□ -1.35
HLA-DPA3-207ENST00000454398 AXLP30530 894 aa6.62□□□□□ -1.35
HLA-DPA3-207ENST00000454398 CCR2P41597 374 aa6.62□□□□□ -1.35
HLA-DPA3-207ENST00000454398 CLCNKBP51801 687 aa6.62□□□□□ -1.35
HLA-DPA3-207ENST00000454398 SRSF5Q13243 272 aaKnown RBP6.62□□□□□ -1.35
HLA-DPA3-207ENST00000454398 FZD5Q13467 585 aa6.62□□□□□ -1.35
HLA-DPA3-207ENST00000454398 PRPF4BQ13523 1007 aaKnown RBP6.62□□□□□ -1.35
HLA-DPA3-207ENST00000454398 AXDND1Q5T1B0 1012 aaPredicted RBP6.62□□□□□ -1.35
HLA-DPA3-207ENST00000454398 GALNT17Q6IS24 598 aa6.62□□□□□ -1.35
HLA-DPA3-207ENST00000454398 PHLDB3Q6NSJ2 640 aa6.62□□□□□ -1.35
HLA-DPA3-207ENST00000454398 ZC3H14Q6PJT7 736 aaKnown RBP6.62□□□□□ -1.35
HLA-DPA3-207ENST00000454398 OTUD6AQ7L8S5 288 aa6.62□□□□□ -1.35
HLA-DPA3-207ENST00000454398 IFNLR1Q8IU57 520 aaPredicted RBP6.62□□□□□ -1.35
HLA-DPA3-207ENST00000454398 GPIHBP1Q8IV16 184 aa6.62□□□□□ -1.35
HLA-DPA3-207ENST00000454398 DIS3L2Q8IYB7 885 aaKnown RBP6.62□□□□□ -1.35
HLA-DPA3-207ENST00000454398 HACE1Q8IYU2 909 aa6.62□□□□□ -1.35
HLA-DPA3-207ENST00000454398 CNNM3Q8NE01 707 aa6.62□□□□□ -1.35
HLA-DPA3-207ENST00000454398 RUBCNQ92622 972 aa6.62□□□□□ -1.35
HLA-DPA3-207ENST00000454398 MCRS1Q96EZ8 462 aa6.62□□□□□ -1.35
HLA-DPA3-207ENST00000454398 ZNF274Q96GC6 653 aaPredicted RBP6.62□□□□□ -1.35
HLA-DPA3-207ENST00000454398 HSD17B14Q9BPX1 270 aa6.62□□□□□ -1.35
HLA-DPA3-207ENST00000454398 CCDC113Q9H0I3 377 aa6.62□□□□□ -1.35
HLA-DPA3-207ENST00000454398 PARD6AQ9NPB6 346 aa6.62□□□□□ -1.35
HLA-DPA3-207ENST00000454398 LTB4R2Q9NPC1 389 aa6.62□□□□□ -1.35
HLA-DPA3-207ENST00000454398 UBN1Q9NPG3 1134 aa6.62□□□□□ -1.35
HLA-DPA3-207ENST00000454398 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.62□□□□□ -1.35
HLA-DPA3-207ENST00000454398 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.62□□□□□ -1.35
HLA-DPA3-207ENST00000454398 FNIP2Q9P278 1114 aa6.62□□□□□ -1.35
HLA-DPA3-207ENST00000454398 DNMT3BQ9UBC3 853 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms