RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 TOM1L1O75674 476 aa11.7□□□□□ -0.54
DDX39A-203ENST00000454233 KIF4AO95239 1232 aa11.7□□□□□ -0.54
DDX39A-203ENST00000454233 WEE2P0C1S8 567 aa11.7□□□□□ -0.54
DDX39A-203ENST00000454233 MAPTP10636 758 aaKnown RBP11.7□□□□□ -0.54
DDX39A-203ENST00000454233 HARSP12081 509 aaKnown RBP11.7□□□□□ -0.54
DDX39A-203ENST00000454233 SCP2P22307 547 aa11.7□□□□□ -0.54
DDX39A-203ENST00000454233 PROZP22891 400 aa11.7□□□□□ -0.54
DDX39A-203ENST00000454233 MARCKSP29966 332 aaPredicted RBP11.7□□□□□ -0.54
DDX39A-203ENST00000454233 TXLNAP40222 546 aa11.7□□□□□ -0.54
DDX39A-203ENST00000454233 MATR3P43243 847 aaKnown RBP eCLIP11.7□□□□□ -0.54
DDX39A-203ENST00000454233 CEBPZQ03701 1054 aaKnown RBP11.7□□□□□ -0.54
DDX39A-203ENST00000454233 MCM6Q14566 821 aa11.7□□□□□ -0.54
DDX39A-203ENST00000454233 NOLC1Q14978 699 aaKnown RBP eCLIP11.7□□□□□ -0.54
DDX39A-203ENST00000454233 PTPAQ15257 358 aa11.7□□□□□ -0.54
DDX39A-203ENST00000454233 ARSHQ5FYA8 562 aa11.7□□□□□ -0.54
DDX39A-203ENST00000454233 GLRA4Q5JXX5 417 aa11.7□□□□□ -0.54
DDX39A-203ENST00000454233 FAM171A1Q5VUB5 890 aa11.7□□□□□ -0.54
DDX39A-203ENST00000454233 KANK3Q6NY19 840 aa11.7□□□□□ -0.54
DDX39A-203ENST00000454233 ZPBP2Q6X784 338 aa11.7□□□□□ -0.54
DDX39A-203ENST00000454233 CEP57Q86XR8 500 aa11.7□□□□□ -0.54
DDX39A-203ENST00000454233 MYCT1Q8N699 235 aa11.7□□□□□ -0.54
DDX39A-203ENST00000454233 CEP120Q8N960 986 aa11.7□□□□□ -0.54
DDX39A-203ENST00000454233 LARP4BQ92615 738 aaKnown RBP11.7□□□□□ -0.54
DDX39A-203ENST00000454233 RAD54LQ92698 747 aa11.7□□□□□ -0.54
DDX39A-203ENST00000454233 B3GALT6Q96L58 329 aa11.7□□□□□ -0.54
DDX39A-203ENST00000454233 PPP1R10Q96QC0 940 aaKnown RBP11.7□□□□□ -0.54
DDX39A-203ENST00000454233 REEP2Q9BRK0 252 aa11.7□□□□□ -0.54
DDX39A-203ENST00000454233 TTPALQ9BTX7 342 aa11.7□□□□□ -0.54
DDX39A-203ENST00000454233 CXCL16Q9H2A7 254 aa11.7□□□□□ -0.54
DDX39A-203ENST00000454233 ZHX3Q9H4I2 956 aa11.7□□□□□ -0.54
DDX39A-203ENST00000454233 PARVGQ9HBI0 331 aa11.7□□□□□ -0.54
DDX39A-203ENST00000454233 MAN1C1Q9NR34 630 aa11.7□□□□□ -0.54
DDX39A-203ENST00000454233 BLOC1S4Q9NUP1 217 aa11.7□□□□□ -0.54
DDX39A-203ENST00000454233 SLC38A7Q9NVC3 462 aa11.7□□□□□ -0.54
DDX39A-203ENST00000454233 ANKFY1Q9P2R3 1169 aa11.7□□□□□ -0.54
DDX39A-203ENST00000454233 CDH22Q9UJ99 828 aa11.7□□□□□ -0.54
DDX39A-203ENST00000454233 MTMR6Q9Y217 621 aa11.7□□□□□ -0.54
DDX39A-203ENST00000454233 HCN4Q9Y3Q4 1203 aa11.7□□□□□ -0.54
DDX39A-203ENST00000454233 MUC3AQ02505 3323 aa11.7□□□□□ -0.54
DDX39A-203ENST00000454233 SMIM28A0A1B0GU29 152 aa11.69□□□□□ -0.54
DDX39A-203ENST00000454233 TMEM189-UBE2V1I3L0A0 370 aa11.69□□□□□ -0.54
DDX39A-203ENST00000454233 CLDN3O15551 220 aa11.69□□□□□ -0.54
DDX39A-203ENST00000454233 TRAPPC3O43617 180 aa11.69□□□□□ -0.54
DDX39A-203ENST00000454233 B3GAT3O94766 335 aa11.69□□□□□ -0.54
DDX39A-203ENST00000454233 BRD1O95696 1058 aa11.69□□□□□ -0.54
DDX39A-203ENST00000454233 C1RP00736 705 aa11.69□□□□□ -0.54
DDX39A-203ENST00000454233 HSP90AA1P07900 732 aaKnown RBP11.69□□□□□ -0.54
DDX39A-203ENST00000454233 ABCD1P33897 745 aa11.69□□□□□ -0.54
DDX39A-203ENST00000454233 NCKAP1LP55160 1127 aa11.69□□□□□ -0.54
DDX39A-203ENST00000454233 NAB2Q15742 525 aa11.69□□□□□ -0.54
DDX39A-203ENST00000454233 SPECC1Q5M775 1068 aa11.69□□□□□ -0.54
DDX39A-203ENST00000454233 FAM173BQ6P4H8 233 aa11.69□□□□□ -0.54
DDX39A-203ENST00000454233 PDXDC1Q6P996 788 aa11.69□□□□□ -0.54
DDX39A-203ENST00000454233 DCLRE1AQ6PJP8 1040 aa11.69□□□□□ -0.54
DDX39A-203ENST00000454233 C15orf39Q6ZRI6 1047 aa11.69□□□□□ -0.54
DDX39A-203ENST00000454233 HAUS6Q7Z4H7 955 aa11.69□□□□□ -0.54
DDX39A-203ENST00000454233 GPR149Q86SP6 731 aa11.69□□□□□ -0.54
DDX39A-203ENST00000454233 PALB2Q86YC2 1186 aa11.69□□□□□ -0.54
DDX39A-203ENST00000454233 GLYCTKQ8IVS8 523 aa11.69□□□□□ -0.54
DDX39A-203ENST00000454233 HSCBQ8IWL3 235 aa11.69□□□□□ -0.54
DDX39A-203ENST00000454233 TDRD5Q8NAT2 981 aaKnown RBP11.69□□□□□ -0.54
DDX39A-203ENST00000454233 HDAC7Q8WUI4 952 aa11.69□□□□□ -0.54
DDX39A-203ENST00000454233 EDAQ92838 391 aa11.69□□□□□ -0.54
DDX39A-203ENST00000454233 SNX21Q969T3 373 aa11.69□□□□□ -0.54
DDX39A-203ENST00000454233 DDX27Q96GQ7 796 aaKnown RBP11.69□□□□□ -0.54
DDX39A-203ENST00000454233 EPSTI1Q96J88 318 aa11.69□□□□□ -0.54
DDX39A-203ENST00000454233 ZBTB45Q96K62 511 aaPredicted RBP11.69□□□□□ -0.54
DDX39A-203ENST00000454233 SNX27Q96L92 541 aa11.69□□□□□ -0.54
DDX39A-203ENST00000454233 PLEKHA4Q9H4M7 779 aa11.69□□□□□ -0.54
DDX39A-203ENST00000454233 STK17AQ9UEE5 414 aa11.69□□□□□ -0.54
DDX39A-203ENST00000454233 FBXO2Q9UK22 296 aaPredicted RBP11.69□□□□□ -0.54
DDX39A-203ENST00000454233 SRPRBQ9Y5M8 271 aaKnown RBP11.69□□□□□ -0.54
DDX39A-203ENST00000454233 CCDC195A0A1B0GUA6 201 aa11.68□□□□□ -0.54
DDX39A-203ENST00000454233 C2CD4DB7Z1M9 353 aa11.68□□□□□ -0.54
DDX39A-203ENST00000454233 K7ENM7 598 aa11.68□□□□□ -0.54
DDX39A-203ENST00000454233 ABLIM1O14639 778 aa11.68□□□□□ -0.54
DDX39A-203ENST00000454233 TRAK2O60296 914 aa11.68□□□□□ -0.54
DDX39A-203ENST00000454233 RPL17P18621 184 aaKnown RBP11.68□□□□□ -0.54
DDX39A-203ENST00000454233 DDIT3P35638 169 aa11.68□□□□□ -0.54
DDX39A-203ENST00000454233 LIG4P49917 911 aa11.68□□□□□ -0.54
DDX39A-203ENST00000454233 ZNF131P52739 623 aa11.68□□□□□ -0.54
DDX39A-203ENST00000454233 ZXDAP98168 799 aa11.68□□□□□ -0.54
DDX39A-203ENST00000454233 PSMD5Q16401 504 aa11.68□□□□□ -0.54
DDX39A-203ENST00000454233 XKR4Q5GH76 650 aa11.68□□□□□ -0.54
DDX39A-203ENST00000454233 RTP2Q5QGT7 225 aa11.68□□□□□ -0.54
DDX39A-203ENST00000454233 RRAGBQ5VZM2 374 aa11.68□□□□□ -0.54
DDX39A-203ENST00000454233 PRSS55Q6UWB4 352 aaPredicted RBP11.68□□□□□ -0.54
DDX39A-203ENST00000454233 ALKAL1Q6UXT8 129 aa11.68□□□□□ -0.54
DDX39A-203ENST00000454233 CYP26C1Q6V0L0 522 aa11.68□□□□□ -0.54
DDX39A-203ENST00000454233 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.68□□□□□ -0.54
DDX39A-203ENST00000454233 CCDC149Q6ZUS6 474 aa11.68□□□□□ -0.54
DDX39A-203ENST00000454233 PLCD3Q8N3E9 789 aa11.68□□□□□ -0.54
DDX39A-203ENST00000454233 KRI1Q8N9T8 703 aaKnown RBP11.68□□□□□ -0.54
DDX39A-203ENST00000454233 CMASQ8NFW8 434 aaPredicted RBP11.68□□□□□ -0.54
DDX39A-203ENST00000454233 LRRC15Q8TF66 581 aa11.68□□□□□ -0.54
DDX39A-203ENST00000454233 PIK3R5Q8WYR1 880 aa11.68□□□□□ -0.54
DDX39A-203ENST00000454233 ACSF2Q96CM8 615 aaPredicted RBP11.68□□□□□ -0.54
DDX39A-203ENST00000454233 RAPGEFL1Q9UHV5 662 aa11.68□□□□□ -0.54
DDX39A-203ENST00000454233 USTQ9Y2C2 406 aa11.68□□□□□ -0.54
DDX39A-203ENST00000454233 HNRNPDLO14979 420 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms