RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 HACE1Q8IYU2 909 aa15.25■□□□□ 0.03
SHMT2-203ENST00000449049 CCDC127Q96BQ5 260 aa15.25■□□□□ 0.03
SHMT2-203ENST00000449049 NDST4Q9H3R1 872 aa15.25■□□□□ 0.03
SHMT2-203ENST00000449049 PLEKHA5Q9HAU0 1116 aa15.25■□□□□ 0.03
SHMT2-203ENST00000449049 PDE11AQ9HCR9 933 aa15.25■□□□□ 0.03
SHMT2-203ENST00000449049 INTS13Q9NVM9 706 aa15.25■□□□□ 0.03
SHMT2-203ENST00000449049 RECQL4O94761 1208 aa15.25■□□□□ 0.03
SHMT2-203ENST00000449049 PFKMP08237 780 aa15.25■□□□□ 0.03
SHMT2-203ENST00000449049 CSF2RAP15509 400 aa15.25■□□□□ 0.03
SHMT2-203ENST00000449049 ATF7P17544 494 aaPredicted RBP15.25■□□□□ 0.03
SHMT2-203ENST00000449049 YARSP54577 528 aaKnown RBP15.25■□□□□ 0.03
SHMT2-203ENST00000449049 PLCB2Q00722 1185 aa15.25■□□□□ 0.03
SHMT2-203ENST00000449049 KCNH2Q12809 1159 aa15.25■□□□□ 0.03
SHMT2-203ENST00000449049 NR1I3Q14994 352 aa15.25■□□□□ 0.03
SHMT2-203ENST00000449049 FILIP1LQ4L180 1135 aa15.25■□□□□ 0.03
SHMT2-203ENST00000449049 TCERG1LQ5VWI1 586 aa15.25■□□□□ 0.03
SHMT2-203ENST00000449049 ECHDC2Q86YB7 292 aa15.25■□□□□ 0.03
SHMT2-203ENST00000449049 SNX27Q96L92 541 aa15.25■□□□□ 0.03
SHMT2-203ENST00000449049 CGRRF1Q99675 332 aa15.25■□□□□ 0.03
SHMT2-203ENST00000449049 XPO4Q9C0E2 1151 aaKnown RBP15.25■□□□□ 0.03
SHMT2-203ENST00000449049 RNF39Q9H2S5 420 aa15.25■□□□□ 0.03
SHMT2-203ENST00000449049 ASB7Q9H672 318 aa15.25■□□□□ 0.03
SHMT2-203ENST00000449049 ENPP3O14638 875 aa15.24■□□□□ 0.03
SHMT2-203ENST00000449049 CBFA2T2O43439 604 aa15.24■□□□□ 0.03
SHMT2-203ENST00000449049 AFPP02771 609 aaKnown RBP15.24■□□□□ 0.03
SHMT2-203ENST00000449049 AKAP5P24588 427 aa15.24■□□□□ 0.03
SHMT2-203ENST00000449049 XKR4Q5GH76 650 aa15.24■□□□□ 0.03
SHMT2-203ENST00000449049 ALKAL1Q6UXT8 129 aa15.24■□□□□ 0.03
SHMT2-203ENST00000449049 ZNF598Q86UK7 904 aaKnown RBP15.24■□□□□ 0.03
SHMT2-203ENST00000449049 WDR49Q8IV35 697 aa15.24■□□□□ 0.03
SHMT2-203ENST00000449049 CD302Q8IX05 232 aa15.24■□□□□ 0.03
SHMT2-203ENST00000449049 FNBP1Q96RU3 617 aa15.24■□□□□ 0.03
SHMT2-203ENST00000449049 TRIM5Q9C035 493 aa15.24■□□□□ 0.03
SHMT2-203ENST00000449049 TOPORSQ9NS56 1045 aaPredicted RBP15.24■□□□□ 0.03
SHMT2-203ENST00000449049 LACTBL1A8MY62 500 aa15.23■□□□□ 0.03
SHMT2-203ENST00000449049 EVI5O60447 810 aa15.23■□□□□ 0.03
SHMT2-203ENST00000449049 STX10O60499 249 aa15.23■□□□□ 0.03
SHMT2-203ENST00000449049 DLATP10515 647 aaKnown RBP15.23■□□□□ 0.03
SHMT2-203ENST00000449049 ITGA4P13612 1032 aa15.23■□□□□ 0.03
SHMT2-203ENST00000449049 GTF2H1P32780 548 aa15.23■□□□□ 0.03
SHMT2-203ENST00000449049 PPP3CAQ08209 521 aa15.23■□□□□ 0.03
SHMT2-203ENST00000449049 PGBD4Q96DM1 585 aa15.23■□□□□ 0.03
SHMT2-203ENST00000449049 POP1Q99575 1024 aaKnown RBP15.23■□□□□ 0.03
SHMT2-203ENST00000449049 APOL6Q9BWW8 343 aa15.23■□□□□ 0.03
SHMT2-203ENST00000449049 CNTN3Q9P232 1028 aa15.23■□□□□ 0.03
SHMT2-203ENST00000449049 PTPRJQ12913 1337 aa15.23■□□□□ 0.03
SHMT2-203ENST00000449049 PDCD11Q14690 1871 aaKnown RBP15.23■□□□□ 0.03
SHMT2-203ENST00000449049 CITO14578 2027 aa15.23■□□□□ 0.03
SHMT2-203ENST00000449049 PMM2O15305 246 aa15.23■□□□□ 0.03
SHMT2-203ENST00000449049 EOMESO95936 686 aa15.23■□□□□ 0.03
SHMT2-203ENST00000449049 FMO5P49326 533 aa15.23■□□□□ 0.03
SHMT2-203ENST00000449049 ZNF75DP51815 510 aa15.23■□□□□ 0.03
SHMT2-203ENST00000449049 AGMOQ6ZNB7 445 aa15.23■□□□□ 0.03
SHMT2-203ENST00000449049 RPUSD2Q8IZ73 545 aaKnown RBP15.23■□□□□ 0.03
SHMT2-203ENST00000449049 ZNF516Q92618 1163 aa15.23■□□□□ 0.03
SHMT2-203ENST00000449049 FAM212AQ96EL1 285 aa15.23■□□□□ 0.03
SHMT2-203ENST00000449049 ELAC1Q9H777 363 aaKnown RBP15.23■□□□□ 0.03
SHMT2-203ENST00000449049 IL23AQ9NPF7 189 aa15.23■□□□□ 0.03
SHMT2-203ENST00000449049 PARP2Q9UGN5 583 aa15.23■□□□□ 0.03
SHMT2-203ENST00000449049 GIT1Q9Y2X7 761 aa15.23■□□□□ 0.03
SHMT2-203ENST00000449049 MICAL3Q7RTP6 2002 aa15.22■□□□□ 0.03
SHMT2-203ENST00000449049 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.22■□□□□ 0.03
SHMT2-203ENST00000449049 MEIS3P2A8K0S8 358 aa15.22■□□□□ 0.03
SHMT2-203ENST00000449049 TEX33O43247 280 aa15.22■□□□□ 0.03
SHMT2-203ENST00000449049 TPM3P06753 285 aa15.22■□□□□ 0.03
SHMT2-203ENST00000449049 AP3M2P53677 418 aa15.22■□□□□ 0.03
SHMT2-203ENST00000449049 IKBKEQ14164 716 aa15.22■□□□□ 0.03
SHMT2-203ENST00000449049 CBWD6Q4V339 395 aa15.22■□□□□ 0.03
SHMT2-203ENST00000449049 CBWD3Q5JTY5 395 aa15.22■□□□□ 0.03
SHMT2-203ENST00000449049 CBWD5Q5RIA9 395 aa15.22■□□□□ 0.03
SHMT2-203ENST00000449049 C15orf39Q6ZRI6 1047 aa15.22■□□□□ 0.03
SHMT2-203ENST00000449049 NT5DC4Q86YG4 428 aa15.22■□□□□ 0.03
SHMT2-203ENST00000449049 EFCAB13Q8IY85 973 aa15.22■□□□□ 0.03
SHMT2-203ENST00000449049 BADQ92934 168 aa15.22■□□□□ 0.03
SHMT2-203ENST00000449049 LPPQ93052 612 aa15.22■□□□□ 0.03
SHMT2-203ENST00000449049 MRFAP1L1Q96HT8 127 aa15.22■□□□□ 0.03
SHMT2-203ENST00000449049 TSPAN18Q96SJ8 248 aa15.22■□□□□ 0.03
SHMT2-203ENST00000449049 TMEM8AQ9HCN3 771 aa15.22■□□□□ 0.03
SHMT2-203ENST00000449049 UBN1Q9NPG3 1134 aa15.22■□□□□ 0.03
SHMT2-203ENST00000449049 DERAQ9Y315 318 aa15.22■□□□□ 0.03
SHMT2-203ENST00000449049 C2CD2Q9Y426 696 aa15.22■□□□□ 0.03
SHMT2-203ENST00000449049 TET1Q8NFU7 2136 aa15.22■□□□□ 0.03
SHMT2-203ENST00000449049 PES1O00541 588 aaKnown RBP15.22■□□□□ 0.03
SHMT2-203ENST00000449049 P4HA2O15460 535 aa15.22■□□□□ 0.03
SHMT2-203ENST00000449049 N4BP1O75113 896 aaKnown RBP15.22■□□□□ 0.03
SHMT2-203ENST00000449049 TNNI1P19237 187 aa15.22■□□□□ 0.03
SHMT2-203ENST00000449049 GCLMP48507 274 aa15.22■□□□□ 0.03
SHMT2-203ENST00000449049 UBXN1Q04323 297 aa15.22■□□□□ 0.03
SHMT2-203ENST00000449049 PPIGQ13427 754 aaKnown RBP eCLIP15.22■□□□□ 0.033e-8■□□□□ 10.3
SHMT2-203ENST00000449049 FKBP15Q5T1M5 1219 aa15.22■□□□□ 0.03
SHMT2-203ENST00000449049 JADE1Q6IE81 842 aa15.22■□□□□ 0.03
SHMT2-203ENST00000449049 TMEM117Q9H0C3 514 aa15.22■□□□□ 0.03
SHMT2-203ENST00000449049 CXCL16Q9H2A7 254 aa15.22■□□□□ 0.03
SHMT2-203ENST00000449049 TMEM161AQ9NX61 479 aa15.22■□□□□ 0.03
SHMT2-203ENST00000449049 ABHD14A-ACY1A0A1B0GW23 586 aa15.21■□□□□ 0.03
SHMT2-203ENST00000449049 GTPBP10A4D1E9 387 aaKnown RBP15.21■□□□□ 0.03
SHMT2-203ENST00000449049 INPPL1O15357 1258 aa15.21■□□□□ 0.03
SHMT2-203ENST00000449049 ADCY5O95622 1261 aa15.21■□□□□ 0.03
SHMT2-203ENST00000449049 C4BPAP04003 597 aaKnown RBP15.21■□□□□ 0.03
SHMT2-203ENST00000449049 NFICP08651 508 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms