RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 MSCO60682 206 aa11.4□□□□□ -0.58
VIPAS39-203ENST00000448935 MOCS3O95396 460 aa11.4□□□□□ -0.58
VIPAS39-203ENST00000448935 SLC10A3P09131 477 aa11.4□□□□□ -0.58
VIPAS39-203ENST00000448935 CTAGE8P0CG41 777 aa11.4□□□□□ -0.58
VIPAS39-203ENST00000448935 INSRRP14616 1297 aa11.4□□□□□ -0.58
VIPAS39-203ENST00000448935 CHMP4BP1P59074 171 aa11.4□□□□□ -0.58
VIPAS39-203ENST00000448935 GCNT1Q02742 428 aa11.4□□□□□ -0.58
VIPAS39-203ENST00000448935 PDE4CQ08493 712 aa11.4□□□□□ -0.58
VIPAS39-203ENST00000448935 DRP2Q13474 957 aa11.4□□□□□ -0.58
VIPAS39-203ENST00000448935 C15orf39Q6ZRI6 1047 aa11.4□□□□□ -0.58
VIPAS39-203ENST00000448935 SAPCD2Q86UD0 394 aa11.4□□□□□ -0.58
VIPAS39-203ENST00000448935 CTAGE6Q86UF2 777 aa11.4□□□□□ -0.58
VIPAS39-203ENST00000448935 ARHGEF19Q8IW93 802 aa11.4□□□□□ -0.58
VIPAS39-203ENST00000448935 CTAGE4Q8IX94 777 aa11.4□□□□□ -0.58
VIPAS39-203ENST00000448935 PPM1KQ8N3J5 372 aa11.4□□□□□ -0.58
VIPAS39-203ENST00000448935 METTL13Q8N6R0 699 aa11.4□□□□□ -0.58
VIPAS39-203ENST00000448935 NPLOC4Q8TAT6 608 aa11.4□□□□□ -0.58
VIPAS39-203ENST00000448935 SOCS4Q8WXH5 440 aa11.4□□□□□ -0.58
VIPAS39-203ENST00000448935 RABGGTAQ92696 567 aa11.4□□□□□ -0.58
VIPAS39-203ENST00000448935 CGRRF1Q99675 332 aa11.4□□□□□ -0.58
VIPAS39-203ENST00000448935 ACO2Q99798 780 aaKnown RBP11.4□□□□□ -0.58
VIPAS39-203ENST00000448935 TCHPQ9BT92 498 aa11.4□□□□□ -0.58
VIPAS39-203ENST00000448935 FZD8Q9H461 694 aa11.4□□□□□ -0.58
VIPAS39-203ENST00000448935 RNPEPQ9H4A4 650 aa11.4□□□□□ -0.58
VIPAS39-203ENST00000448935 ZFYVE28Q9HCC9 887 aa11.4□□□□□ -0.58
VIPAS39-203ENST00000448935 C1orf112Q9NSG2 853 aa11.4□□□□□ -0.58
VIPAS39-203ENST00000448935 PRMT7Q9NVM4 692 aaPredicted RBP11.4□□□□□ -0.58
VIPAS39-203ENST00000448935 ARGLU1Q9NWB6 273 aaPredicted RBP11.4□□□□□ -0.58
VIPAS39-203ENST00000448935 NENFQ9UMX5 172 aa11.4□□□□□ -0.58
VIPAS39-203ENST00000448935 RRN3P2A6NIE6 340 aa11.39□□□□□ -0.59
VIPAS39-203ENST00000448935 POM121CA8CG34 1229 aa11.39□□□□□ -0.59
VIPAS39-203ENST00000448935 H3BRB1 525 aa11.39□□□□□ -0.59
VIPAS39-203ENST00000448935 FOXN3O00409 490 aaPredicted RBP11.39□□□□□ -0.59
VIPAS39-203ENST00000448935 IGF2BP3O00425 579 aaKnown RBP eCLIP11.39□□□□□ -0.59
VIPAS39-203ENST00000448935 OGTO15294 1046 aa11.39□□□□□ -0.59
VIPAS39-203ENST00000448935 ATP1A1P05023 1023 aaKnown RBP11.39□□□□□ -0.59
VIPAS39-203ENST00000448935 MMP3P08254 477 aa11.39□□□□□ -0.59
VIPAS39-203ENST00000448935 SMPD1P17405 629 aa11.39□□□□□ -0.59
VIPAS39-203ENST00000448935 KLRC1P26715 233 aa11.39□□□□□ -0.59
VIPAS39-203ENST00000448935 ACOT2P49753 483 aa11.39□□□□□ -0.59
VIPAS39-203ENST00000448935 NLRP11P59045 1033 aaKnown RBP11.39□□□□□ -0.59
VIPAS39-203ENST00000448935 PTENP60484 403 aa11.39□□□□□ -0.59
VIPAS39-203ENST00000448935 CDC42EP1Q00587 391 aa11.39□□□□□ -0.59
VIPAS39-203ENST00000448935 TNFAIP2Q03169 654 aa11.39□□□□□ -0.59
VIPAS39-203ENST00000448935 MCL1Q07820 350 aa11.39□□□□□ -0.59
VIPAS39-203ENST00000448935 ELF2Q15723 593 aa11.39□□□□□ -0.59
VIPAS39-203ENST00000448935 FAM187BQ17R55 369 aa11.39□□□□□ -0.59
VIPAS39-203ENST00000448935 ERCC6LQ2NKX8 1250 aa11.39□□□□□ -0.59
VIPAS39-203ENST00000448935 ZACNQ401N2 412 aa11.39□□□□□ -0.59
VIPAS39-203ENST00000448935 TMCO4Q5TGY1 634 aa11.39□□□□□ -0.59
VIPAS39-203ENST00000448935 MPZL3Q6UWV2 235 aa11.39□□□□□ -0.59
VIPAS39-203ENST00000448935 CRELD2Q6UXH1 353 aaPredicted RBP11.39□□□□□ -0.59
VIPAS39-203ENST00000448935 TSHZ1Q6ZSZ6 1077 aa11.39□□□□□ -0.59
VIPAS39-203ENST00000448935 BRSK2Q8IWQ3 736 aa11.39□□□□□ -0.59
VIPAS39-203ENST00000448935 GPR161Q8N6U8 529 aaKnown RBP11.39□□□□□ -0.59
VIPAS39-203ENST00000448935 SLC30A5Q8TAD4 765 aa11.39□□□□□ -0.59
VIPAS39-203ENST00000448935 SHC3Q92529 594 aa11.39□□□□□ -0.59
VIPAS39-203ENST00000448935 TSC1Q92574 1164 aa11.39□□□□□ -0.59
VIPAS39-203ENST00000448935 POP1Q99575 1024 aaKnown RBP11.39□□□□□ -0.59
VIPAS39-203ENST00000448935 AGPAT1Q99943 283 aa11.39□□□□□ -0.59
VIPAS39-203ENST00000448935 C16orf70Q9BSU1 422 aa11.39□□□□□ -0.59
VIPAS39-203ENST00000448935 TUT1Q9H6E5 874 aaKnown RBP11.39□□□□□ -0.59
VIPAS39-203ENST00000448935 HYOU1Q9Y4L1 999 aa11.39□□□□□ -0.59
VIPAS39-203ENST00000448935 PCDHGC5Q9Y5F6 944 aa11.39□□□□□ -0.59
VIPAS39-203ENST00000448935 CAPN6Q9Y6Q1 641 aa11.39□□□□□ -0.59
VIPAS39-203ENST00000448935 KAT6AQ92794 2004 aa11.39□□□□□ -0.59
VIPAS39-203ENST00000448935 EVPLQ92817 2033 aa11.39□□□□□ -0.59
VIPAS39-203ENST00000448935 CEP350Q5VT06 3117 aa11.39□□□□□ -0.59
VIPAS39-203ENST00000448935 MYH10P35580 1976 aa11.39□□□□□ -0.59
VIPAS39-203ENST00000448935 MOXD2PA6NHM9 499 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 INO80B-WBP1J3KQ70 363 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 DDX3XO00571 662 aaKnown RBP eCLIP11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 ENC1O14682 589 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 ZEB2O60315 1214 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 LRRN2O75325 713 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 AP1G2O75843 785 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 TUBBP07437 444 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 TMEM253P0C7T8 217 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 RGS2P41220 211 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 BPIFB4P59827 614 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 POU5F1Q01860 360 aaKnown RBP11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 BIRC3Q13489 604 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 PRPF4BQ13523 1007 aaKnown RBP11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 QPCTQ16769 361 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 KYAT1Q16773 422 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 TMEM63BQ5T3F8 832 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 GJC2Q5T442 439 aaPredicted RBP11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 ATF7IP2Q5U623 682 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 C17orf99Q6UX52 265 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 RSRC2Q7L4I2 434 aaKnown RBP11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 WDR49Q8IV35 697 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 FAM71AQ8IYT1 594 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 SYCE1Q8N0S2 351 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 ZNF710Q8N1W2 664 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 PDCL2Q8N4E4 241 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 TAS1R2Q8TE23 839 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 U2AF1L4Q8WU68 220 aaKnown RBP11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 UBE2Q2Q8WVN8 375 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 DHX38Q92620 1227 aaKnown RBP11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 SEMA4DQ92854 862 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms