RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 THOC5Q13769 683 aaKnown RBP9.73□□□□□ -0.85
SMC6-207ENST00000448223 EFTUD2Q15029 972 aaKnown RBP eCLIP9.73□□□□□ -0.852e-6■■■□□ 18.3
SMC6-207ENST00000448223 PFKFB3Q16875 520 aaPredicted RBP9.73□□□□□ -0.85
SMC6-207ENST00000448223 CCNI2Q6ZMN8 369 aaPredicted RBP9.73□□□□□ -0.85
SMC6-207ENST00000448223 TRIM50Q86XT4 487 aa9.73□□□□□ -0.85
SMC6-207ENST00000448223 HDAC7Q8WUI4 952 aa9.73□□□□□ -0.85
SMC6-207ENST00000448223 CYGBQ8WWM9 190 aa9.73□□□□□ -0.85
SMC6-207ENST00000448223 EZH1Q92800 747 aaPredicted RBP9.73□□□□□ -0.85
SMC6-207ENST00000448223 MTERF3Q96E29 417 aa9.73□□□□□ -0.85
SMC6-207ENST00000448223 SYTL2Q9HCH5 934 aa9.73□□□□□ -0.85
SMC6-207ENST00000448223 DNM3Q9UQ16 869 aa9.73□□□□□ -0.85
SMC6-207ENST00000448223 DIS3Q9Y2L1 958 aaKnown RBP9.73□□□□□ -0.85
SMC6-207ENST00000448223 SH3GLB1Q9Y371 365 aa9.73□□□□□ -0.85
SMC6-207ENST00000448223 PLEKHG2Q9H7P9 1386 aa9.73□□□□□ -0.85
SMC6-207ENST00000448223 PJA2O43164 708 aa9.73□□□□□ -0.85
SMC6-207ENST00000448223 KRT16P08779 473 aa9.73□□□□□ -0.85
SMC6-207ENST00000448223 POTEIP0CG38 1075 aa9.73□□□□□ -0.85
SMC6-207ENST00000448223 BTDP43251 543 aa9.73□□□□□ -0.85
SMC6-207ENST00000448223 TRIM67Q6ZTA4 783 aa9.73□□□□□ -0.85
SMC6-207ENST00000448223 MYCT1Q8N699 235 aa9.73□□□□□ -0.85
SMC6-207ENST00000448223 ZNF555Q8NEP9 628 aa9.73□□□□□ -0.85
SMC6-207ENST00000448223 KIAA1024Q9UPX6 916 aa9.73□□□□□ -0.85
SMC6-207ENST00000448223 AURKCQ9UQB9 309 aa9.73□□□□□ -0.85
SMC6-207ENST00000448223 ATP6V1G1O75348 118 aa9.73□□□□□ -0.85
SMC6-207ENST00000448223 STAM2O75886 525 aa9.73□□□□□ -0.85
SMC6-207ENST00000448223 TDP2O95551 362 aa9.73□□□□□ -0.85
SMC6-207ENST00000448223 HLA-DOAP06340 250 aa9.73□□□□□ -0.85
SMC6-207ENST00000448223 FOSL2P15408 326 aa9.73□□□□□ -0.85
SMC6-207ENST00000448223 MRPL12P52815 198 aaKnown RBP9.73□□□□□ -0.85
SMC6-207ENST00000448223 TUBA3CQ13748 450 aa9.73□□□□□ -0.85
SMC6-207ENST00000448223 LRRC8EQ6NSJ5 796 aa9.73□□□□□ -0.85
SMC6-207ENST00000448223 DPP8Q6V1X1 898 aaPredicted RBP9.73□□□□□ -0.85
SMC6-207ENST00000448223 MYCBPAPQ8TBZ2 947 aa9.73□□□□□ -0.85
SMC6-207ENST00000448223 TMEM47Q9BQJ4 181 aa9.73□□□□□ -0.85
SMC6-207ENST00000448223 NDST4Q9H3R1 872 aa9.73□□□□□ -0.85
SMC6-207ENST00000448223 KIF17Q9P2E2 1029 aa9.73□□□□□ -0.85
SMC6-207ENST00000448223 ARPP21Q9UBL0 812 aaPredicted RBP9.73□□□□□ -0.85
SMC6-207ENST00000448223 LRCH1Q9Y2L9 728 aa9.73□□□□□ -0.85
SMC6-207ENST00000448223 DTNAQ9Y4J8 743 aa9.73□□□□□ -0.85
SMC6-207ENST00000448223 FAM237AA0A1B0GTK4 181 aa9.73□□□□□ -0.85
SMC6-207ENST00000448223 PYGLP06737 847 aa9.73□□□□□ -0.85
SMC6-207ENST00000448223 GYS1P13807 737 aa9.73□□□□□ -0.85
SMC6-207ENST00000448223 CCNE1P24864 410 aa9.73□□□□□ -0.85
SMC6-207ENST00000448223 ABCC6O95255 1503 aa9.73□□□□□ -0.85
SMC6-207ENST00000448223 GRID2IPA4D2P6 1211 aa9.72□□□□□ -0.85
SMC6-207ENST00000448223 EIF2S1P05198 315 aaKnown RBP9.72□□□□□ -0.85
SMC6-207ENST00000448223 GSTT1P30711 240 aa9.72□□□□□ -0.85
SMC6-207ENST00000448223 CACNB3P54284 484 aa9.72□□□□□ -0.85
SMC6-207ENST00000448223 UBXN2AP68543 259 aa9.72□□□□□ -0.85
SMC6-207ENST00000448223 PABPC4Q13310 644 aaKnown RBP eCLIP9.72□□□□□ -0.85
SMC6-207ENST00000448223 MYBPC2Q14324 1141 aa9.72□□□□□ -0.85
SMC6-207ENST00000448223 AGBL2Q5U5Z8 902 aa9.72□□□□□ -0.85
SMC6-207ENST00000448223 KRT25Q7Z3Z0 450 aa9.72□□□□□ -0.85
SMC6-207ENST00000448223 ATP6V1E2Q96A05 226 aa9.72□□□□□ -0.85
SMC6-207ENST00000448223 RNPC3Q96LT9 517 aaKnown RBP9.72□□□□□ -0.85
SMC6-207ENST00000448223 PLA2G12BQ9BX93 195 aa9.72□□□□□ -0.85
SMC6-207ENST00000448223 EDEM3Q9BZQ6 932 aa9.72□□□□□ -0.85
SMC6-207ENST00000448223 NSMCE4AQ9NXX6 385 aa9.72□□□□□ -0.85
SMC6-207ENST00000448223 STK24Q9Y6E0 443 aa9.72□□□□□ -0.85
SMC6-207ENST00000448223 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.72□□□□□ -0.85
SMC6-207ENST00000448223 B2RBV5 119 aa9.72□□□□□ -0.85
SMC6-207ENST00000448223 CLIC2O15247 247 aa9.72□□□□□ -0.85
SMC6-207ENST00000448223 SERPING1P05155 500 aa9.72□□□□□ -0.85
SMC6-207ENST00000448223 GSNP06396 782 aa9.72□□□□□ -0.85
SMC6-207ENST00000448223 TMOD1P28289 359 aa9.72□□□□□ -0.85
SMC6-207ENST00000448223 ADCY7P51828 1080 aa9.72□□□□□ -0.85
SMC6-207ENST00000448223 CAV1Q03135 178 aa9.72□□□□□ -0.85
SMC6-207ENST00000448223 INPP5AQ14642 412 aa9.72□□□□□ -0.85
SMC6-207ENST00000448223 ZNF554Q86TJ5 538 aa9.72□□□□□ -0.85
SMC6-207ENST00000448223 GPBP1Q86WP2 473 aa9.72□□□□□ -0.85
SMC6-207ENST00000448223 TTC25Q96NG3 672 aa9.72□□□□□ -0.85
SMC6-207ENST00000448223 CLEC4MQ9H2X3 399 aaPredicted RBP9.72□□□□□ -0.85
SMC6-207ENST00000448223 ATXN10Q9UBB4 475 aa9.72□□□□□ -0.85
SMC6-207ENST00000448223 DMGDHQ9UI17 866 aaKnown RBP9.72□□□□□ -0.85
SMC6-207ENST00000448223 L1RE1Q9UN81 338 aa9.72□□□□□ -0.85
SMC6-207ENST00000448223 RTCBQ9Y3I0 505 aaKnown RBP9.72□□□□□ -0.85
SMC6-207ENST00000448223 USP17L5A8MUK1 530 aa9.72□□□□□ -0.85
SMC6-207ENST00000448223 DDX39AO00148 427 aaKnown RBP9.72□□□□□ -0.85
SMC6-207ENST00000448223 ORC4O43929 436 aa9.72□□□□□ -0.85
SMC6-207ENST00000448223 GUCY1B2O75343 617 aa9.72□□□□□ -0.85
SMC6-207ENST00000448223 KRT38O76015 456 aa9.72□□□□□ -0.85
SMC6-207ENST00000448223 FCHO2Q0JRZ9 810 aa9.72□□□□□ -0.85
SMC6-207ENST00000448223 ADAM9Q13443 819 aa9.72□□□□□ -0.85
SMC6-207ENST00000448223 SPATA4Q8NEY3 305 aa9.72□□□□□ -0.85
SMC6-207ENST00000448223 RANBP17Q9H2T7 1088 aaKnown RBP9.72□□□□□ -0.85
SMC6-207ENST00000448223 FANCEQ9HB96 536 aa9.72□□□□□ -0.85
SMC6-207ENST00000448223 AKAP10O43572 662 aa9.72□□□□□ -0.85
SMC6-207ENST00000448223 PALMO75781 387 aa9.72□□□□□ -0.85
SMC6-207ENST00000448223 PRPF6O94906 941 aaKnown RBP9.72□□□□□ -0.85
SMC6-207ENST00000448223 MAPK4P31152 587 aa9.72□□□□□ -0.85
SMC6-207ENST00000448223 CTTNQ14247 550 aaKnown RBP9.72□□□□□ -0.85
SMC6-207ENST00000448223 LPCAT2Q7L5N7 544 aa9.72□□□□□ -0.85
SMC6-207ENST00000448223 LARP4BQ92615 738 aaKnown RBP9.72□□□□□ -0.85
SMC6-207ENST00000448223 DHTKD1Q96HY7 919 aaPredicted RBP9.72□□□□□ -0.85
SMC6-207ENST00000448223 PCDHA12Q9UN75 941 aa9.72□□□□□ -0.85
SMC6-207ENST00000448223 C5P01031 1676 aa9.71□□□□□ -0.85
SMC6-207ENST00000448223 ZSCAN5CA6NGD5 496 aaPredicted RBP9.71□□□□□ -0.85
SMC6-207ENST00000448223 SEMA3EO15041 775 aa9.71□□□□□ -0.85
SMC6-207ENST00000448223 SLC1A4P43007 532 aa9.71□□□□□ -0.85
SMC6-207ENST00000448223 RPS6P62753 249 aaKnown RBP9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms