RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 EN2P19622 333 aaPredicted RBP4.41□□□□□ -1.7
PMS1-216ENST00000447734 XPAP23025 273 aaPredicted RBP4.41□□□□□ -1.7
PMS1-216ENST00000447734 AOAHP28039 575 aa4.41□□□□□ -1.7
PMS1-216ENST00000447734 AFMP43652 599 aa4.41□□□□□ -1.7
PMS1-216ENST00000447734 SLC6A11P48066 632 aa4.41□□□□□ -1.7
PMS1-216ENST00000447734 TUBP50607 506 aa4.41□□□□□ -1.7
PMS1-216ENST00000447734 CORO7P57737 925 aa4.41□□□□□ -1.7
PMS1-216ENST00000447734 HTRA4P83105 476 aaPredicted RBP4.41□□□□□ -1.7
PMS1-216ENST00000447734 CDC42EP1Q00587 391 aa4.41□□□□□ -1.7
PMS1-216ENST00000447734 EGR3Q06889 387 aa4.41□□□□□ -1.7
PMS1-216ENST00000447734 PPP3CAQ08209 521 aa4.41□□□□□ -1.7
PMS1-216ENST00000447734 TRPC3Q13507 836 aa4.41□□□□□ -1.7
PMS1-216ENST00000447734 PTK2BQ14289 1009 aa4.41□□□□□ -1.7
PMS1-216ENST00000447734 KHDC1Q4VXA5 237 aaKnown RBP4.41□□□□□ -1.7
PMS1-216ENST00000447734 CCDC178Q5BJE1 867 aa4.41□□□□□ -1.7
PMS1-216ENST00000447734 C3orf38Q5JPI3 329 aa4.41□□□□□ -1.7
PMS1-216ENST00000447734 KHDC1LQ5JSQ8 128 aa4.41□□□□□ -1.7
PMS1-216ENST00000447734 CNKSR3Q6P9H4 555 aa4.41□□□□□ -1.7
PMS1-216ENST00000447734 OGFOD3Q6PK18 319 aa4.41□□□□□ -1.7
PMS1-216ENST00000447734 NEK10Q6ZWH5 1172 aa4.41□□□□□ -1.7
PMS1-216ENST00000447734 THAP5Q7Z6K1 395 aa4.41□□□□□ -1.7
PMS1-216ENST00000447734 GALNT5Q7Z7M9 940 aa4.41□□□□□ -1.7
PMS1-216ENST00000447734 RSPH3Q86UC2 560 aa4.41□□□□□ -1.7
PMS1-216ENST00000447734 MOGAT3Q86VF5 341 aa4.41□□□□□ -1.7
PMS1-216ENST00000447734 C2CD5Q86YS7 1000 aa4.41□□□□□ -1.7
PMS1-216ENST00000447734 CREG2Q8IUH2 290 aa4.41□□□□□ -1.7
PMS1-216ENST00000447734 CREBRFQ8IUR6 639 aa4.41□□□□□ -1.7
PMS1-216ENST00000447734 FTSJ3Q8IY81 847 aaKnown RBP4.41□□□□□ -1.7
PMS1-216ENST00000447734 SIMC1Q8NDZ2 872 aa4.41□□□□□ -1.7
PMS1-216ENST00000447734 FAM71BQ8TC56 605 aa4.41□□□□□ -1.7
PMS1-216ENST00000447734 BRIX1Q8TDN6 353 aaKnown RBP4.41□□□□□ -1.7
PMS1-216ENST00000447734 CLEC4DQ8WXI8 215 aa4.41□□□□□ -1.7
PMS1-216ENST00000447734 PAWRQ96IZ0 340 aaKnown RBP4.41□□□□□ -1.7
PMS1-216ENST00000447734 RSRC1Q96IZ7 334 aaKnown RBP4.41□□□□□ -1.7
PMS1-216ENST00000447734 MAELQ96JY0 434 aaKnown RBP4.41□□□□□ -1.7
PMS1-216ENST00000447734 HSPA12BQ96MM6 686 aa4.41□□□□□ -1.7
PMS1-216ENST00000447734 TBC1D32Q96NH3 1257 aa4.41□□□□□ -1.7
PMS1-216ENST00000447734 NAP1L5Q96NT1 182 aaPredicted RBP4.41□□□□□ -1.7
PMS1-216ENST00000447734 VRK1Q99986 396 aaPredicted RBP4.41□□□□□ -1.7
PMS1-216ENST00000447734 NOL10Q9BSC4 688 aaKnown RBP4.41□□□□□ -1.7
PMS1-216ENST00000447734 LSM14BQ9BX40 385 aaKnown RBP4.41□□□□□ -1.7
PMS1-216ENST00000447734 STK32BQ9NY57 414 aa4.41□□□□□ -1.7
PMS1-216ENST00000447734 NKIRAS2Q9NYR9 191 aa4.41□□□□□ -1.7
PMS1-216ENST00000447734 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.41□□□□□ -1.7
PMS1-216ENST00000447734 COL20A1Q9P218 1284 aa4.41□□□□□ -1.7
PMS1-216ENST00000447734 KIF17Q9P2E2 1029 aa4.41□□□□□ -1.7
PMS1-216ENST00000447734 AASSQ9UDR5 926 aa4.41□□□□□ -1.7
PMS1-216ENST00000447734 PCDHA6Q9UN73 950 aa4.41□□□□□ -1.7
PMS1-216ENST00000447734 JAG2Q9Y219 1238 aa4.41□□□□□ -1.7
PMS1-216ENST00000447734 ACOT7O00154 380 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 PLOD3O60568 738 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 ZBED4O75132 1171 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 ANXA2P07355 339 aaKnown RBP4.4□□□□□ -1.71
PMS1-216ENST00000447734 NCAM1P13591 858 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 TACR1P25103 407 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 CALRP27797 417 aaKnown RBP4.4□□□□□ -1.71
PMS1-216ENST00000447734 MC4RP32245 332 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 HOXD12P35452 270 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 ADD2P35612 726 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 PAPOLAP51003 745 aaKnown RBP4.4□□□□□ -1.71
PMS1-216ENST00000447734 NRG3P56975 720 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 DCAF7P61962 342 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 RPS16P62249 146 aaKnown RBP4.4□□□□□ -1.71
PMS1-216ENST00000447734 TLE2Q04725 743 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 GRIN1Q05586 938 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 NOLC1Q14978 699 aaKnown RBP eCLIP4.4□□□□□ -1.71
PMS1-216ENST00000447734 SEPT2Q15019 361 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 NKPD1Q17RQ9 610 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 ZKSCAN2Q63HK3 967 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 SULT6B1Q6IMI4 303 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 TMCO3Q6UWJ1 677 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 GADL1Q6ZQY3 521 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 RINLQ6ZS11 566 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 BEND4Q6ZU67 534 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 GAREM2Q75VX8 874 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 TMPRSS7Q7RTY8 843 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 DTX1Q86Y01 620 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 DCP2Q8IU60 420 aaKnown RBP4.4□□□□□ -1.71
PMS1-216ENST00000447734 GLB1L2Q8IW92 636 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 FAM20CQ8IXL6 584 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 ADGRG2Q8IZP9 1017 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 SDR16C5Q8N3Y7 309 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 CELF5Q8N6W0 485 aaKnown RBP4.4□□□□□ -1.71
PMS1-216ENST00000447734 LSMEM1Q8N8F7 131 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 CYP2W1Q8TAV3 490 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 SPPL3Q8TCT6 385 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 CALML6Q8TD86 181 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 IPO4Q8TEX9 1081 aaKnown RBP4.4□□□□□ -1.71
PMS1-216ENST00000447734 STYXQ8WUJ0 223 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 HTRA1Q92743 480 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 SYTL4Q96C24 671 aaPredicted RBP4.4□□□□□ -1.71
PMS1-216ENST00000447734 NMD3Q96D46 503 aaKnown RBP4.4□□□□□ -1.71
PMS1-216ENST00000447734 HIST1H2AHQ96KK5 128 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 SNX22Q96L94 193 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 JMJD8Q96S16 334 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 NELL2Q99435 816 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 HIST1H2AJQ99878 128 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 SDF4Q9BRK5 362 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 LMAN2LQ9H0V9 348 aa4.4□□□□□ -1.71
PMS1-216ENST00000447734 WDCPQ9H6R7 721 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms