RNA–Protein interactions for RNA: ENST00000442265.2

IRF3-204, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-204ENST00000442265 B3GALT6Q96L58 329 aa18.2■□□□□ 0.5
IRF3-204ENST00000442265 CDT1Q9H211 546 aa18.2■□□□□ 0.5
IRF3-204ENST00000442265 CACNG4Q9UBN1 327 aa18.2■□□□□ 0.5
IRF3-204ENST00000442265 GDAQ9Y2T3 454 aa18.2■□□□□ 0.5
IRF3-204ENST00000442265 TGM5O43548 720 aa18.19■□□□□ 0.5
IRF3-204ENST00000442265 MCF2P10911 925 aa18.19■□□□□ 0.5
IRF3-204ENST00000442265 SP100P23497 879 aaPredicted RBP18.19■□□□□ 0.5
IRF3-204ENST00000442265 MTMR3Q13615 1198 aa18.19■□□□□ 0.5
IRF3-204ENST00000442265 PDXDC1Q6P996 788 aa18.19■□□□□ 0.5
IRF3-204ENST00000442265 CCDC149Q6ZUS6 474 aa18.19■□□□□ 0.5
IRF3-204ENST00000442265 OTOP3Q7RTS5 596 aa18.19■□□□□ 0.5
IRF3-204ENST00000442265 KREMEN2Q8NCW0 462 aa18.19■□□□□ 0.5
IRF3-204ENST00000442265 TMEM161BQ8NDZ6 487 aa18.19■□□□□ 0.5
IRF3-204ENST00000442265 LNX1Q8TBB1 728 aaPredicted RBP18.19■□□□□ 0.5
IRF3-204ENST00000442265 PBXIP1Q96AQ6 731 aa18.19■□□□□ 0.5
IRF3-204ENST00000442265 ZNF707Q96C28 371 aaPredicted RBP18.19■□□□□ 0.5
IRF3-204ENST00000442265 UROC1Q96N76 676 aa18.19■□□□□ 0.5
IRF3-204ENST00000442265 TTPALQ9BTX7 342 aa18.19■□□□□ 0.5
IRF3-204ENST00000442265 TARS2Q9BW92 718 aaKnown RBP18.19■□□□□ 0.5
IRF3-204ENST00000442265 TOPORSQ9NS56 1045 aaPredicted RBP18.19■□□□□ 0.5
IRF3-204ENST00000442265 ZDHHC7Q9NXF8 308 aa18.19■□□□□ 0.5
IRF3-204ENST00000442265 SMIM28A0A1B0GU29 152 aa18.18■□□□□ 0.5
IRF3-204ENST00000442265 CCDC195A0A1B0GUA6 201 aa18.18■□□□□ 0.5
IRF3-204ENST00000442265 SFI1A8K8P3 1242 aa18.18■□□□□ 0.5
IRF3-204ENST00000442265 PLA2G4BP0C869 781 aa18.18■□□□□ 0.5
IRF3-204ENST00000442265 UPP1Q16831 310 aa18.18■□□□□ 0.5
IRF3-204ENST00000442265 ARSHQ5FYA8 562 aa18.18■□□□□ 0.5
IRF3-204ENST00000442265 DCLRE1AQ6PJP8 1040 aa18.18■□□□□ 0.5
IRF3-204ENST00000442265 FBXL6Q8N531 539 aa18.18■□□□□ 0.5
IRF3-204ENST00000442265 ACSF2Q96CM8 615 aaPredicted RBP18.18■□□□□ 0.5
IRF3-204ENST00000442265 CCDC94Q9BW85 323 aaPredicted RBP18.18■□□□□ 0.5
IRF3-204ENST00000442265 WDR6Q9NNW5 1121 aaKnown RBP18.18■□□□□ 0.5
IRF3-204ENST00000442265 DENND4AQ7Z401 1863 aa18.18■□□□□ 0.5
IRF3-204ENST00000442265 SLC16A4O15374 487 aa18.17■□□□□ 0.5
IRF3-204ENST00000442265 TOM1L1O75674 476 aa18.17■□□□□ 0.5
IRF3-204ENST00000442265 MAPTP10636 758 aaKnown RBP18.17■□□□□ 0.5
IRF3-204ENST00000442265 KCNE1P15382 129 aa18.17■□□□□ 0.5
IRF3-204ENST00000442265 PDCP20941 246 aa18.17■□□□□ 0.5
IRF3-204ENST00000442265 SCP2P22307 547 aa18.17■□□□□ 0.5
IRF3-204ENST00000442265 HOXD11P31277 338 aaPredicted RBP18.17■□□□□ 0.5
IRF3-204ENST00000442265 LONP1P36776 959 aaKnown RBP18.17■□□□□ 0.5
IRF3-204ENST00000442265 SMTNP53814 917 aa18.17■□□□□ 0.5
IRF3-204ENST00000442265 YARSP54577 528 aaKnown RBP18.17■□□□□ 0.5
IRF3-204ENST00000442265 ZNF568Q3ZCX4 644 aa18.17■□□□□ 0.5
IRF3-204ENST00000442265 FAM171A1Q5VUB5 890 aa18.17■□□□□ 0.5
IRF3-204ENST00000442265 MPZL3Q6UWV2 235 aa18.17■□□□□ 0.5
IRF3-204ENST00000442265 CD300LGQ6UXG3 332 aa18.17■□□□□ 0.5
IRF3-204ENST00000442265 ZPBP2Q6X784 338 aa18.17■□□□□ 0.5
IRF3-204ENST00000442265 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.17■□□□□ 0.5
IRF3-204ENST00000442265 PALB2Q86YC2 1186 aa18.17■□□□□ 0.5
IRF3-204ENST00000442265 CEP120Q8N960 986 aa18.17■□□□□ 0.5
IRF3-204ENST00000442265 CDK5RAP3Q96JB5 506 aa18.17■□□□□ 0.5
IRF3-204ENST00000442265 CLSTN3Q9BQT9 956 aa18.17■□□□□ 0.5
IRF3-204ENST00000442265 LIMD1Q9UGP4 676 aa18.17■□□□□ 0.5
IRF3-204ENST00000442265 ODF2LQ9ULJ1 636 aa18.17■□□□□ 0.5
IRF3-204ENST00000442265 SPDYE4A6NLX3 237 aa18.16■□□□□ 0.5
IRF3-204ENST00000442265 RFPL2O75678 378 aa18.16■□□□□ 0.5
IRF3-204ENST00000442265 FGFR3P22607 806 aa18.16■□□□□ 0.5
IRF3-204ENST00000442265 UBA7P41226 1012 aa18.16■□□□□ 0.5
IRF3-204ENST00000442265 CLCNKBP51801 687 aa18.16■□□□□ 0.5
IRF3-204ENST00000442265 ZRSR1Q15695 479 aaKnown RBP18.16■□□□□ 0.5
IRF3-204ENST00000442265 PRSS55Q6UWB4 352 aaPredicted RBP18.16■□□□□ 0.5
IRF3-204ENST00000442265 ZBTB33Q86T24 672 aa18.16■□□□□ 0.5
IRF3-204ENST00000442265 HASPINQ8TF76 798 aa18.16■□□□□ 0.5
IRF3-204ENST00000442265 SNX27Q96L92 541 aa18.16■□□□□ 0.5
IRF3-204ENST00000442265 SLC38A7Q9NVC3 462 aa18.16■□□□□ 0.5
IRF3-204ENST00000442265 CNTN3Q9P232 1028 aa18.16■□□□□ 0.5
IRF3-204ENST00000442265 LARSQ9P2J5 1176 aaKnown RBP18.16■□□□□ 0.5
IRF3-204ENST00000442265 CACNA1HO95180 2353 aa18.15■□□□□ 0.5
IRF3-204ENST00000442265 H0YCG3 227 aa18.15■□□□□ 0.5
IRF3-204ENST00000442265 N4BP1O75113 896 aaKnown RBP18.15■□□□□ 0.5
IRF3-204ENST00000442265 ZMYND10O75800 440 aa18.15■□□□□ 0.5
IRF3-204ENST00000442265 B3GAT3O94766 335 aa18.15■□□□□ 0.5
IRF3-204ENST00000442265 SPATA31D3P0C874 917 aa18.15■□□□□ 0.5
IRF3-204ENST00000442265 RPL17P18621 184 aaKnown RBP18.15■□□□□ 0.5
IRF3-204ENST00000442265 IGFBP6P24592 240 aaPredicted RBP18.15■□□□□ 0.5
IRF3-204ENST00000442265 ZNF131P52739 623 aa18.15■□□□□ 0.5
IRF3-204ENST00000442265 NCKAP1LP55160 1127 aa18.15■□□□□ 0.5
IRF3-204ENST00000442265 MCL1Q07820 350 aa18.15■□□□□ 0.5
IRF3-204ENST00000442265 STRN3Q13033 797 aa18.15■□□□□ 0.5
IRF3-204ENST00000442265 SF3A1Q15459 793 aaKnown RBP18.15■□□□□ 0.5
IRF3-204ENST00000442265 PSMD5Q16401 504 aa18.15■□□□□ 0.5
IRF3-204ENST00000442265 GLRA4Q5JXX5 417 aa18.15■□□□□ 0.5
IRF3-204ENST00000442265 SPATA31D4Q6ZUB0 917 aa18.15■□□□□ 0.5
IRF3-204ENST00000442265 SUGP1Q8IWZ8 645 aaKnown RBP18.15■□□□□ 0.5
IRF3-204ENST00000442265 LRRC15Q8TF66 581 aa18.15■□□□□ 0.5
IRF3-204ENST00000442265 STAMQ92783 540 aa18.15■□□□□ 0.5
IRF3-204ENST00000442265 CALML4Q96GE6 196 aa18.15■□□□□ 0.5
IRF3-204ENST00000442265 DDX27Q96GQ7 796 aaKnown RBP18.15■□□□□ 0.5
IRF3-204ENST00000442265 ZMAT2Q96NC0 199 aaKnown RBP18.15■□□□□ 0.5
IRF3-204ENST00000442265 ACAP3Q96P50 834 aa18.15■□□□□ 0.5
IRF3-204ENST00000442265 PLIN2Q99541 437 aa18.15■□□□□ 0.5
IRF3-204ENST00000442265 BACH2Q9BYV9 841 aa18.15■□□□□ 0.5
IRF3-204ENST00000442265 PRKD2Q9BZL6 878 aa18.15■□□□□ 0.5
IRF3-204ENST00000442265 BLOC1S4Q9NUP1 217 aa18.15■□□□□ 0.5
IRF3-204ENST00000442265 FBXW11Q9UKB1 542 aa18.15■□□□□ 0.5
IRF3-204ENST00000442265 WDR87Q6ZQQ6 2873 aa18.15■□□□□ 0.5
IRF3-204ENST00000442265 PLXNA3P51805 1871 aa18.14■□□□□ 0.49
IRF3-204ENST00000442265 MEFVO15553 781 aaPredicted RBP18.14■□□□□ 0.49
IRF3-204ENST00000442265 TRAPPC3O43617 180 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms